Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC006160.2-201ENST00000637708 154 ntBASIC-1.05□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.06□□□□□ -2.58
RNF41Q9H4P4 AL500527.2-201ENST00000454105 95 ntBASIC-1.06□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.07□□□□□ -2.58
RNF41Q9H4P4 RNU6-168P-201ENST00000516189 101 ntBASIC-1.07□□□□□ -2.58
RNF41Q9H4P4 RNU6-49P-201ENST00000384256 107 ntBASIC-1.08□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.08□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.08□□□□□ -2.58
RNF41Q9H4P4 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.08□□□□□ -2.58
RNF41Q9H4P4 RNA5SP89-201ENST00000410300 108 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 HAR1A.1-201ENST00000459583 118 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 RNA5SP476-201ENST00000516613 103 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 RNU6-807P-201ENST00000516805 107 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 MIR548AI-201ENST00000579940 88 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 MIR382-201ENST00000637119 76 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.1□□□□□ -2.59
RNF41Q9H4P4 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.1□□□□□ -2.59
RNF41Q9H4P4 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.11□□□□□ -2.59
RNF41Q9H4P4 SNORA8.1-201ENST00000384250 140 ntBASIC-1.11□□□□□ -2.59
RNF41Q9H4P4 U2.22-201ENST00000636441 106 ntBASIC-1.11□□□□□ -2.59
RNF41Q9H4P4 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.12□□□□□ -2.59
RNF41Q9H4P4 SNORA26.4-201ENST00000391188 123 ntBASIC-1.12□□□□□ -2.59
RNF41Q9H4P4 SNORD115-33-201ENST00000363723 82 ntBASIC-1.13□□□□□ -2.59
RNF41Q9H4P4 RNU6-246P-201ENST00000384702 107 ntBASIC-1.13□□□□□ -2.59
RNF41Q9H4P4 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.13□□□□□ -2.59
RNF41Q9H4P4 SNORD63.1-201ENST00000516178 80 ntBASIC-1.13□□□□□ -2.59
RNF41Q9H4P4 RNU6-982P-201ENST00000516216 102 ntBASIC-1.13□□□□□ -2.59
RNF41Q9H4P4 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 SNORD45.1-201ENST00000363181 77 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 SNORD115-22-201ENST00000364456 82 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 RNU6-604P-201ENST00000390917 100 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 RNU7-174P-201ENST00000516248 59 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 MIR1297-201ENST00000637311 77 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.15□□□□□ -2.59
RNF41Q9H4P4 RNU6-979P-201ENST00000383896 107 ntBASIC-1.15□□□□□ -2.59
RNF41Q9H4P4 RNU6-24P-201ENST00000384440 107 ntBASIC-1.15□□□□□ -2.59
RNF41Q9H4P4 MIR409-201ENST00000362237 79 ntBASIC-1.16□□□□□ -2.6
RNF41Q9H4P4 MIR378F-201ENST00000578143 78 ntBASIC-1.16□□□□□ -2.6
RNF41Q9H4P4 MIR5588-201ENST00000581890 63 ntBASIC-1.16□□□□□ -2.6
RNF41Q9H4P4 MIR4484-201ENST00000582855 83 ntBASIC-1.16□□□□□ -2.6
RNF41Q9H4P4 RNU6-315P-201ENST00000362666 107 ntBASIC-1.17□□□□□ -2.6
RNF41Q9H4P4 SCARNA18B-201ENST00000458806 135 ntBASIC-1.17□□□□□ -2.6
RNF41Q9H4P4 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.17□□□□□ -2.6
RNF41Q9H4P4 MIR3115-201ENST00000577915 68 ntBASIC-1.17□□□□□ -2.6
RNF41Q9H4P4 IGLL4P-201ENST00000614590 133 ntBASIC-1.17□□□□□ -2.6
RNF41Q9H4P4 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 RNY1P1-201ENST00000364372 112 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 RNA5SP192-201ENST00000364404 120 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 RNU6-153P-201ENST00000364422 104 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 MIR4320-201ENST00000636981 65 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.19□□□□□ -2.6
RNF41Q9H4P4 RNA5SP266-201ENST00000410273 108 ntBASIC-1.19□□□□□ -2.6
RNF41Q9H4P4 U7.5-201ENST00000517224 61 ntBASIC-1.19□□□□□ -2.6
RNF41Q9H4P4 MIR4499-201ENST00000584834 69 ntBASIC-1.19□□□□□ -2.6
RNF41Q9H4P4 MIR548C-201ENST00000384815 97 ntBASIC-1.2□□□□□ -2.6
RNF41Q9H4P4 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.21□□□□□ -2.6
RNF41Q9H4P4 RNU6-587P-201ENST00000391282 106 ntBASIC-1.21□□□□□ -2.6
RNF41Q9H4P4 RNU7-171P-201ENST00000459581 62 ntBASIC-1.21□□□□□ -2.6
RNF41Q9H4P4 RNU6-732P-201ENST00000516033 103 ntBASIC-1.21□□□□□ -2.6
RNF41Q9H4P4 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.21□□□□□ -2.6
RNF41Q9H4P4 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 SNORD19-201ENST00000391191 68 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 RNU6-380P-201ENST00000410207 107 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 snoU83B.1-201ENST00000517136 88 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 MIR3165-201ENST00000579874 75 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 uc_338.19-201ENST00000616808 99 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.23□□□□□ -2.61
RNF41Q9H4P4 RNY4P30-201ENST00000410216 95 ntBASIC-1.23□□□□□ -2.61
RNF41Q9H4P4 RNU7-88P-201ENST00000458752 63 ntBASIC-1.23□□□□□ -2.61
RNF41Q9H4P4 MIR664A-201ENST00000626086 82 ntBASIC-1.23□□□□□ -2.61
RNF41Q9H4P4 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.24□□□□□ -2.61
RNF41Q9H4P4 AL353691.2-201ENST00000443795 59 ntBASIC-1.24□□□□□ -2.61
RNF41Q9H4P4 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.24□□□□□ -2.61
RNF41Q9H4P4 AP002795.1-201ENST00000534879 84 ntBASIC-1.24□□□□□ -2.61
RNF41Q9H4P4 U4.4-201ENST00000620626 117 ntBASIC-1.24□□□□□ -2.61
RNF41Q9H4P4 RNU6-698P-201ENST00000363523 107 ntBASIC-1.25□□□□□ -2.61
RNF41Q9H4P4 RNU6-34P-201ENST00000364874 107 ntBASIC-1.25□□□□□ -2.61
RNF41Q9H4P4 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.25□□□□□ -2.61
RNF41Q9H4P4 SNORD113.1-201ENST00000363280 73 ntBASIC-1.26□□□□□ -2.61
RNF41Q9H4P4 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.26□□□□□ -2.61
RNF41Q9H4P4 MIR29B1-201ENST00000385015 81 ntBASIC-1.26□□□□□ -2.61
RNF41Q9H4P4 RNA5SP461-201ENST00000516451 104 ntBASIC-1.26□□□□□ -2.61
RNF41Q9H4P4 MIR8053-201ENST00000613344 75 ntBASIC-1.26□□□□□ -2.61
RNF41Q9H4P4 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 RNU6-458P-201ENST00000384179 107 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 U6.58-201ENST00000613107 107 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 RNA5SP26-201ENST00000362406 119 ntBASIC-1.28□□□□□ -2.61
RNF41Q9H4P4 MIR4712-201ENST00000583750 82 ntBASIC-1.28□□□□□ -2.61
RNF41Q9H4P4 MIR548V-201ENST00000584165 80 ntBASIC-1.28□□□□□ -2.61
RNF41Q9H4P4 MIR1245B-201ENST00000636115 69 ntBASIC-1.28□□□□□ -2.61
RNF41Q9H4P4 SNORD45A-201ENST00000384512 84 ntBASIC-1.29□□□□□ -2.62
RNF41Q9H4P4 MTND4LP1-201ENST00000446263 157 ntBASIC-1.29□□□□□ -2.62
RNF41Q9H4P4 MIR4306-201ENST00000583390 91 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms