Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU6-242P-201ENST00000384359 107 ntBASIC-0.16□□□□□ -2.44
CDX2Q99626 RNA5SP300-201ENST00000391197 107 ntBASIC-0.16□□□□□ -2.44
CDX2Q99626 AC096531.1-201ENST00000419107 107 ntBASIC-0.16□□□□□ -2.44
CDX2Q99626 RNU6-523P-201ENST00000516304 54 ntBASIC-0.16□□□□□ -2.44
CDX2Q99626 MIR4436A-201ENST00000585278 85 ntBASIC-0.16□□□□□ -2.44
CDX2Q99626 AL353803.5-201ENST00000599815 141 ntBASIC-0.16□□□□□ -2.44
CDX2Q99626 RNU6-681P-201ENST00000364012 104 ntBASIC-0.17□□□□□ -2.44
CDX2Q99626 SNORD116-24-201ENST00000384549 92 ntBASIC-0.17□□□□□ -2.44
CDX2Q99626 RNU6-752P-201ENST00000516376 102 ntBASIC-0.17□□□□□ -2.44
CDX2Q99626 MIR4432-201ENST00000581823 84 ntBASIC-0.17□□□□□ -2.44
CDX2Q99626 SNORD113.1-201ENST00000363280 73 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 RNU6-901P-201ENST00000384593 106 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 MIR124-2-201ENST00000385081 109 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 MIR196A2-201ENST00000385189 110 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
CDX2Q99626 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 RNU6-721P-201ENST00000410155 105 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 RNU6-70P-201ENST00000516438 60 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 RNU6-687P-201ENST00000516443 89 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 RNA5SP66-201ENST00000517178 101 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 MIR3666-201ENST00000607845 111 ntBASIC-0.18□□□□□ -2.44
CDX2Q99626 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.19□□□□□ -2.44
CDX2Q99626 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.19□□□□□ -2.44
CDX2Q99626 MIR548C-201ENST00000384815 97 ntBASIC-0.19□□□□□ -2.44
CDX2Q99626 SNORD78.1-201ENST00000390866 65 ntBASIC-0.19□□□□□ -2.44
CDX2Q99626 RNU6-857P-201ENST00000515893 110 ntBASIC-0.19□□□□□ -2.44
CDX2Q99626 RNU6-518P-201ENST00000516056 96 ntBASIC-0.19□□□□□ -2.44
CDX2Q99626 MIR6854-201ENST00000614935 69 ntBASIC-0.19□□□□□ -2.44
CDX2Q99626 MIR6851-201ENST00000617060 67 ntBASIC-0.19□□□□□ -2.44
CDX2Q99626 AL445584.3-201ENST00000617173 78 ntBASIC-0.19□□□□□ -2.44
CDX2Q99626 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.2□□□□□ -2.44
CDX2Q99626 RNU7-174P-201ENST00000516248 59 ntBASIC-0.2□□□□□ -2.44
CDX2Q99626 SNORD22.1-201ENST00000516331 125 ntBASIC-0.2□□□□□ -2.44
CDX2Q99626 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.2□□□□□ -2.44
CDX2Q99626 U4.4-201ENST00000620626 117 ntBASIC-0.2□□□□□ -2.44
CDX2Q99626 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.21□□□□□ -2.44
CDX2Q99626 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.21□□□□□ -2.44
CDX2Q99626 RNU6-246P-201ENST00000384702 107 ntBASIC-0.21□□□□□ -2.44
CDX2Q99626 MIR630-201ENST00000384957 97 ntBASIC-0.21□□□□□ -2.44
CDX2Q99626 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.21□□□□□ -2.44
CDX2Q99626 MIR548V-201ENST00000584165 80 ntBASIC-0.21□□□□□ -2.44
CDX2Q99626 SNORD2-201ENST00000459163 69 ntBASIC-0.22□□□□□ -2.44
CDX2Q99626 RNU6-320P-201ENST00000516511 106 ntBASIC-0.22□□□□□ -2.44
CDX2Q99626 RNU6-807P-201ENST00000516805 107 ntBASIC-0.22□□□□□ -2.44
CDX2Q99626 snoR1.1-201ENST00000628177 80 ntBASIC-0.22□□□□□ -2.44
CDX2Q99626 MIR1297-201ENST00000637311 77 ntBASIC-0.22□□□□□ -2.44
CDX2Q99626 RNU6-540P-201ENST00000384622 101 ntBASIC-0.23□□□□□ -2.45
CDX2Q99626 RNU6-587P-201ENST00000391282 106 ntBASIC-0.23□□□□□ -2.45
CDX2Q99626 RNU6-279P-201ENST00000391297 101 ntBASIC-0.23□□□□□ -2.45
CDX2Q99626 RNU7-88P-201ENST00000458752 63 ntBASIC-0.23□□□□□ -2.45
CDX2Q99626 SNORD126-201ENST00000459475 77 ntBASIC-0.23□□□□□ -2.45
CDX2Q99626 AP002795.1-201ENST00000534879 84 ntBASIC-0.23□□□□□ -2.45
CDX2Q99626 MIR8064-201ENST00000612863 90 ntBASIC-0.23□□□□□ -2.45
CDX2Q99626 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.23□□□□□ -2.45
CDX2Q99626 MIR1295B-201ENST00000636144 60 ntBASIC-0.23□□□□□ -2.45
CDX2Q99626 AC093726.3-201ENST00000637588 150 ntBASIC-0.23□□□□□ -2.45
CDX2Q99626 MIR517B-201ENST00000385102 67 ntBASIC-0.24□□□□□ -2.45
CDX2Q99626 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
CDX2Q99626 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.24□□□□□ -2.45
CDX2Q99626 AP000533.3-201ENST00000447704 118 ntBASIC-0.24□□□□□ -2.45
CDX2Q99626 MIR4263-201ENST00000584745 83 ntBASIC-0.24□□□□□ -2.45
CDX2Q99626 MIR3202-2-201ENST00000635980 79 ntBASIC-0.24□□□□□ -2.45
CDX2Q99626 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.25□□□□□ -2.45
CDX2Q99626 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.25□□□□□ -2.45
CDX2Q99626 SNORA41B-201ENST00000384785 128 ntBASIC-0.25□□□□□ -2.45
CDX2Q99626 MIR154-201ENST00000385243 84 ntBASIC-0.25□□□□□ -2.45
CDX2Q99626 SNORA3B-201ENST00000391305 131 ntBASIC-0.25□□□□□ -2.45
CDX2Q99626 MIR1302-4-201ENST00000408701 150 ntBASIC-0.25□□□□□ -2.45
CDX2Q99626 MIR3179-1-201ENST00000578940 84 ntBASIC-0.25□□□□□ -2.45
CDX2Q99626 MIR3179-2-201ENST00000579107 84 ntBASIC-0.25□□□□□ -2.45
CDX2Q99626 MIR3179-3-201ENST00000579566 84 ntBASIC-0.25□□□□□ -2.45
CDX2Q99626 MIR3179-4-201ENST00000617599 84 ntBASIC-0.25□□□□□ -2.45
CDX2Q99626 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 RNA5SP275-201ENST00000363936 118 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 RNU6-24P-201ENST00000384440 107 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 MIR518B-201ENST00000385127 83 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 MIR204-201ENST00000385200 110 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 SNORD113-2-201ENST00000391082 72 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 RNU6-284P-201ENST00000411105 106 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 AL021921.1-201ENST00000442774 93 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 RNU7-154P-201ENST00000516194 62 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 U7.5-201ENST00000517224 61 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 U7.4-201ENST00000614961 63 ntBASIC-0.26□□□□□ -2.45
CDX2Q99626 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.27□□□□□ -2.45
CDX2Q99626 RNU6-668P-201ENST00000364180 107 ntBASIC-0.27□□□□□ -2.45
CDX2Q99626 SNORD114-17-201ENST00000364699 75 ntBASIC-0.27□□□□□ -2.45
CDX2Q99626 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.27□□□□□ -2.45
CDX2Q99626 SNORD19-201ENST00000391191 68 ntBASIC-0.27□□□□□ -2.45
CDX2Q99626 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.27□□□□□ -2.45
CDX2Q99626 SNORD18.2-201ENST00000459604 70 ntBASIC-0.27□□□□□ -2.45
CDX2Q99626 RNA5SP470-201ENST00000516463 106 ntBASIC-0.27□□□□□ -2.45
CDX2Q99626 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.27□□□□□ -2.45
CDX2Q99626 RNU6-598P-201ENST00000364017 105 ntBASIC-0.28□□□□□ -2.45
CDX2Q99626 RNU6-431P-201ENST00000383874 107 ntBASIC-0.28□□□□□ -2.45
CDX2Q99626 RNU6-411P-201ENST00000384451 107 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 284.3 ms