Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 RNU6-820P-201ENST00000384273 107 ntBASIC-0.58□□□□□ -2.5
NUP88Q99567 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 SNORD114-14-201ENST00000362723 75 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 RNU6-787P-201ENST00000384032 107 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 MIR519A2-201ENST00000384990 87 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 MIR518B-201ENST00000385127 83 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 SNORD22.1-201ENST00000516331 125 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 AL445584.3-201ENST00000617173 78 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 SNORA13-201ENST00000458790 133 ntBASIC-0.6□□□□□ -2.51
NUP88Q99567 RNY1P9-201ENST00000532431 109 ntBASIC-0.6□□□□□ -2.51
NUP88Q99567 MT-TQ-201ENST00000387372 72 ntBASIC-0.61□□□□□ -2.51
NUP88Q99567 SNORA3B-201ENST00000391305 131 ntBASIC-0.61□□□□□ -2.51
NUP88Q99567 U2.7-201ENST00000619197 100 ntBASIC-0.61□□□□□ -2.51
NUP88Q99567 SNORD45.1-201ENST00000363181 77 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 RNU6-645P-201ENST00000364649 106 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 SNORD74.6-201ENST00000364796 70 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 RNU6-982P-201ENST00000516216 102 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 MIR664A-201ENST00000626086 82 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 RNU6-604P-201ENST00000390917 100 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 AC021146.6-201ENST00000514659 117 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR3179-1-201ENST00000578940 84 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR3179-2-201ENST00000579107 84 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR3179-3-201ENST00000579566 84 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR4712-201ENST00000583750 82 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 AC062037.1-201ENST00000605302 128 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR3179-4-201ENST00000617599 84 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR1245B-201ENST00000636115 69 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 SCARNA18B-201ENST00000458806 135 ntBASIC-0.64□□□□□ -2.51
NUP88Q99567 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
NUP88Q99567 RNU6-518P-201ENST00000516056 96 ntBASIC-0.65□□□□□ -2.51
NUP88Q99567 RNU7-154P-201ENST00000516194 62 ntBASIC-0.65□□□□□ -2.51
NUP88Q99567 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.65□□□□□ -2.51
NUP88Q99567 SNORD115-22-201ENST00000364456 82 ntBASIC-0.66□□□□□ -2.52
NUP88Q99567 MIR548C-201ENST00000384815 97 ntBASIC-0.66□□□□□ -2.52
NUP88Q99567 MIR124-2-201ENST00000385081 109 ntBASIC-0.66□□□□□ -2.52
NUP88Q99567 AL021921.1-201ENST00000442774 93 ntBASIC-0.66□□□□□ -2.52
NUP88Q99567 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.66□□□□□ -2.52
NUP88Q99567 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.67□□□□□ -2.52
NUP88Q99567 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
NUP88Q99567 SNX3P1X-201ENST00000414887 175 ntBASIC-0.67□□□□□ -2.52
NUP88Q99567 MIR4666B-201ENST00000578142 81 ntBASIC-0.67□□□□□ -2.52
NUP88Q99567 SNORD73B-201ENST00000364394 72 ntBASIC-0.68□□□□□ -2.52
NUP88Q99567 AP000533.3-201ENST00000447704 118 ntBASIC-0.68□□□□□ -2.52
NUP88Q99567 MIR3681-201ENST00000580089 72 ntBASIC-0.68□□□□□ -2.52
NUP88Q99567 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.69□□□□□ -2.52
NUP88Q99567 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.69□□□□□ -2.52
NUP88Q99567 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.69□□□□□ -2.52
NUP88Q99567 SNORD18.2-201ENST00000459604 70 ntBASIC-0.69□□□□□ -2.52
NUP88Q99567 RNU7-174P-201ENST00000516248 59 ntBASIC-0.69□□□□□ -2.52
NUP88Q99567 MIR517B-201ENST00000385102 67 ntBASIC-0.7□□□□□ -2.52
NUP88Q99567 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.7□□□□□ -2.52
NUP88Q99567 RNU6-246P-201ENST00000384702 107 ntBASIC-0.71□□□□□ -2.52
NUP88Q99567 MIR8053-201ENST00000613344 75 ntBASIC-0.71□□□□□ -2.52
NUP88Q99567 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.72□□□□□ -2.52
NUP88Q99567 SNORA26.2-201ENST00000390922 122 ntBASIC-0.72□□□□□ -2.52
NUP88Q99567 MIR1468-201ENST00000410600 86 ntBASIC-0.72□□□□□ -2.52
NUP88Q99567 SNORD45A-201ENST00000384512 84 ntBASIC-0.73□□□□□ -2.53
NUP88Q99567 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.73□□□□□ -2.53
NUP88Q99567 RNU6-924P-201ENST00000362926 108 ntBASIC-0.74□□□□□ -2.53
NUP88Q99567 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.74□□□□□ -2.53
NUP88Q99567 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.74□□□□□ -2.53
NUP88Q99567 U4.4-201ENST00000620626 117 ntBASIC-0.74□□□□□ -2.53
NUP88Q99567 SNORD113.1-201ENST00000363280 73 ntBASIC-0.75□□□□□ -2.53
NUP88Q99567 RNU6-431P-201ENST00000383874 107 ntBASIC-0.75□□□□□ -2.53
NUP88Q99567 MTND4LP1-201ENST00000446263 157 ntBASIC-0.75□□□□□ -2.53
NUP88Q99567 RNU6-70P-201ENST00000516438 60 ntBASIC-0.76□□□□□ -2.53
NUP88Q99567 MIR3134-201ENST00000579433 74 ntBASIC-0.76□□□□□ -2.53
NUP88Q99567 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.77□□□□□ -2.53
NUP88Q99567 RNU6-587P-201ENST00000391282 106 ntBASIC-0.77□□□□□ -2.53
NUP88Q99567 SNORD114-17-201ENST00000364699 75 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 SNORD116-24-201ENST00000384549 92 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 MIR147A-201ENST00000385079 72 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 RNY4P29-201ENST00000410801 97 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 RNU6-668P-201ENST00000364180 107 ntBASIC-0.79□□□□□ -2.54
NUP88Q99567 SNORD115-31-201ENST00000365318 82 ntBASIC-0.79□□□□□ -2.54
NUP88Q99567 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.79□□□□□ -2.54
NUP88Q99567 MIR4723-201ENST00000585070 81 ntBASIC-0.79□□□□□ -2.54
NUP88Q99567 MIR3202-2-201ENST00000635980 79 ntBASIC-0.8□□□□□ -2.54
NUP88Q99567 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 RNA5SP173-201ENST00000364857 136 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 MIR154-201ENST00000385243 84 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 SNORD64-201ENST00000386683 67 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 AL500527.2-201ENST00000454105 95 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 RNU6-687P-201ENST00000516443 89 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 SNORD114-25-201ENST00000363742 72 ntBASIC-0.82□□□□□ -2.54
NUP88Q99567 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.82□□□□□ -2.54
NUP88Q99567 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.82□□□□□ -2.54
NUP88Q99567 RNU6-573P-201ENST00000383938 106 ntBASIC-0.82□□□□□ -2.54
NUP88Q99567 MIR587-201ENST00000384845 96 ntBASIC-0.82□□□□□ -2.54
NUP88Q99567 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.82□□□□□ -2.54
NUP88Q99567 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.83□□□□□ -2.54
NUP88Q99567 RNA5SP215-201ENST00000363440 122 ntBASIC-0.83□□□□□ -2.54
NUP88Q99567 RNU6-698P-201ENST00000363523 107 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 206.1 ms