Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU6-1174P-201ENST00000517278 101 ntBASIC1.14□□□□□ -2.23
CNTNAP3BQ96NU0 MIR4464-201ENST00000580818 92 ntBASIC1.14□□□□□ -2.23
CNTNAP3BQ96NU0 RN7SL660P-201ENST00000614852 299 ntBASIC1.14□□□□□ -2.23
CNTNAP3BQ96NU0 MIR501-201ENST00000390204 84 ntBASIC1.13□□□□□ -2.23
CNTNAP3BQ96NU0 RNU6-229P-201ENST00000516614 102 ntBASIC1.13□□□□□ -2.23
CNTNAP3BQ96NU0 MIR6513-201ENST00000621188 64 ntBASIC1.13□□□□□ -2.23
CNTNAP3BQ96NU0 SNORD118-201ENST00000363593 134 ntBASIC1.12□□□□□ -2.23
CNTNAP3BQ96NU0 AC068338.1-201ENST00000565567 176 ntBASIC1.12□□□□□ -2.23
CNTNAP3BQ96NU0 SNORA25.18-201ENST00000607153 114 ntBASIC1.12□□□□□ -2.23
CNTNAP3BQ96NU0 MIR6888-201ENST00000621977 67 ntBASIC1.12□□□□□ -2.23
CNTNAP3BQ96NU0 MIR936-201ENST00000401264 98 ntBASIC1.11□□□□□ -2.23
CNTNAP3BQ96NU0 RNU7-88P-201ENST00000458752 63 ntBASIC1.11□□□□□ -2.23
CNTNAP3BQ96NU0 SNORD63.1-201ENST00000516178 80 ntBASIC1.11□□□□□ -2.23
CNTNAP3BQ96NU0 MIR4714-201ENST00000580728 77 ntBASIC1.11□□□□□ -2.23
CNTNAP3BQ96NU0 MIR3170-201ENST00000582699 77 ntBASIC1.11□□□□□ -2.23
CNTNAP3BQ96NU0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.1□□□□□ -2.23
CNTNAP3BQ96NU0 ACA64.5-201ENST00000516207 127 ntBASIC1.1□□□□□ -2.23
CNTNAP3BQ96NU0 SNORD63.2-201ENST00000516303 64 ntBASIC1.1□□□□□ -2.23
CNTNAP3BQ96NU0 AC084368.1-201ENST00000620935 65 ntBASIC1.1□□□□□ -2.23
CNTNAP3BQ96NU0 AL445584.3-201ENST00000617173 78 ntBASIC1.09□□□□□ -2.23
CNTNAP3BQ96NU0 MIR6755-201ENST00000619993 66 ntBASIC1.09□□□□□ -2.23
CNTNAP3BQ96NU0 RNU6-530P-201ENST00000391180 107 ntBASIC1.08□□□□□ -2.24
CNTNAP3BQ96NU0 MIR876-201ENST00000401147 81 ntBASIC1.08□□□□□ -2.24
CNTNAP3BQ96NU0 RNU6-848P-201ENST00000515948 107 ntBASIC1.08□□□□□ -2.24
CNTNAP3BQ96NU0 RNU6-617P-201ENST00000516147 107 ntBASIC1.08□□□□□ -2.24
CNTNAP3BQ96NU0 RNU6-473P-201ENST00000516164 107 ntBASIC1.08□□□□□ -2.24
CNTNAP3BQ96NU0 RNU6-1049P-201ENST00000516414 107 ntBASIC1.08□□□□□ -2.24
CNTNAP3BQ96NU0 MIR3973-201ENST00000579824 107 ntBASIC1.08□□□□□ -2.24
CNTNAP3BQ96NU0 Y_RNA.423-201ENST00000384057 113 ntBASIC1.07□□□□□ -2.24
CNTNAP3BQ96NU0 MIR106A-201ENST00000384870 81 ntBASIC1.07□□□□□ -2.24
CNTNAP3BQ96NU0 RNA5SP285-201ENST00000516619 119 ntBASIC1.07□□□□□ -2.24
CNTNAP3BQ96NU0 MIR3925-201ENST00000584674 77 ntBASIC1.07□□□□□ -2.24
CNTNAP3BQ96NU0 Y_RNA.321-201ENST00000365149 102 ntBASIC1.06□□□□□ -2.24
CNTNAP3BQ96NU0 SNORA36.2-201ENST00000384004 127 ntBASIC1.06□□□□□ -2.24
CNTNAP3BQ96NU0 MIR140-201ENST00000385282 100 ntBASIC1.06□□□□□ -2.24
CNTNAP3BQ96NU0 RNU6-1326P-201ENST00000391262 107 ntBASIC1.06□□□□□ -2.24
CNTNAP3BQ96NU0 MIR2909-201ENST00000617113 69 ntBASIC1.06□□□□□ -2.24
CNTNAP3BQ96NU0 Y_RNA.206-201ENST00000364136 102 ntBASIC1.05□□□□□ -2.24
CNTNAP3BQ96NU0 RNA5SP331-201ENST00000364986 107 ntBASIC1.05□□□□□ -2.24
CNTNAP3BQ96NU0 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
CNTNAP3BQ96NU0 SNORA40.8-201ENST00000411034 126 ntBASIC1.05□□□□□ -2.24
CNTNAP3BQ96NU0 AP000676.1-201ENST00000533307 52 ntBASIC1.05□□□□□ -2.24
CNTNAP3BQ96NU0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
CNTNAP3BQ96NU0 MIR608-201ENST00000384820 100 ntBASIC1.04□□□□□ -2.24
CNTNAP3BQ96NU0 AC104408.1-201ENST00000605241 170 ntBASIC1.04□□□□□ -2.24
CNTNAP3BQ96NU0 Y_RNA.345-201ENST00000365384 92 ntBASIC1.03□□□□□ -2.24
CNTNAP3BQ96NU0 snoR1.1-201ENST00000628177 80 ntBASIC1.03□□□□□ -2.24
CNTNAP3BQ96NU0 RNU6-110P-201ENST00000384508 104 ntBASIC1.01□□□□□ -2.25
CNTNAP3BQ96NU0 RNU6-258P-201ENST00000390884 101 ntBASIC1.01□□□□□ -2.25
CNTNAP3BQ96NU0 Y_RNA.613-201ENST00000410726 97 ntBASIC1.01□□□□□ -2.25
CNTNAP3BQ96NU0 RNU4-54P-201ENST00000516428 129 ntBASIC1.01□□□□□ -2.25
CNTNAP3BQ96NU0 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
CNTNAP3BQ96NU0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CNTNAP3BQ96NU0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CNTNAP3BQ96NU0 SNORA62.4-201ENST00000365504 151 ntBASIC1□□□□□ -2.25
CNTNAP3BQ96NU0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1□□□□□ -2.25
CNTNAP3BQ96NU0 MIR760-201ENST00000390220 80 ntBASIC1□□□□□ -2.25
CNTNAP3BQ96NU0 MIR1468-201ENST00000410600 86 ntBASIC1□□□□□ -2.25
CNTNAP3BQ96NU0 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
CNTNAP3BQ96NU0 MIR6507-201ENST00000613630 70 ntBASIC1□□□□□ -2.25
CNTNAP3BQ96NU0 MIR518A1-201ENST00000385068 85 ntBASIC0.99□□□□□ -2.25
CNTNAP3BQ96NU0 SNORD71-201ENST00000411292 86 ntBASIC0.99□□□□□ -2.25
CNTNAP3BQ96NU0 RNU6-1238P-201ENST00000517215 102 ntBASIC0.99□□□□□ -2.25
CNTNAP3BQ96NU0 RNA5SP128-201ENST00000365305 116 ntBASIC0.98□□□□□ -2.25
CNTNAP3BQ96NU0 RNA5SP193-201ENST00000410353 107 ntBASIC0.98□□□□□ -2.25
CNTNAP3BQ96NU0 RNU7-55P-201ENST00000459426 62 ntBASIC0.98□□□□□ -2.25
CNTNAP3BQ96NU0 MIR4636-201ENST00000582271 80 ntBASIC0.98□□□□□ -2.25
CNTNAP3BQ96NU0 AL391099.1-201ENST00000624635 187 ntBASIC0.98□□□□□ -2.25
CNTNAP3BQ96NU0 MIR4317-201ENST00000637586 65 ntBASIC0.98□□□□□ -2.25
CNTNAP3BQ96NU0 RNU6-1047P-201ENST00000364418 107 ntBASIC0.97□□□□□ -2.25
CNTNAP3BQ96NU0 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
CNTNAP3BQ96NU0 RNU6-1111P-201ENST00000391118 107 ntBASIC0.97□□□□□ -2.25
CNTNAP3BQ96NU0 snoU13.19-201ENST00000459148 104 ntBASIC0.96□□□□□ -2.26
CNTNAP3BQ96NU0 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
CNTNAP3BQ96NU0 RNU6-732P-201ENST00000516033 103 ntBASIC0.95□□□□□ -2.26
CNTNAP3BQ96NU0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.95□□□□□ -2.26
CNTNAP3BQ96NU0 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
CNTNAP3BQ96NU0 MIR499B-201ENST00000636498 73 ntBASIC0.95□□□□□ -2.26
CNTNAP3BQ96NU0 RNA5SP98-201ENST00000363158 137 ntBASIC0.94□□□□□ -2.26
CNTNAP3BQ96NU0 RNU6-973P-201ENST00000364690 107 ntBASIC0.94□□□□□ -2.26
CNTNAP3BQ96NU0 MIR520D-201ENST00000385002 87 ntBASIC0.94□□□□□ -2.26
CNTNAP3BQ96NU0 MIR4711-201ENST00000578274 70 ntBASIC0.94□□□□□ -2.26
CNTNAP3BQ96NU0 uc_338.36-201ENST00000622331 158 ntBASIC0.94□□□□□ -2.26
CNTNAP3BQ96NU0 AC096531.1-201ENST00000419107 107 ntBASIC0.93□□□□□ -2.26
CNTNAP3BQ96NU0 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
CNTNAP3BQ96NU0 MIR4426-201ENST00000640330 63 ntBASIC0.93□□□□□ -2.26
CNTNAP3BQ96NU0 SNORA27.2-201ENST00000363365 126 ntBASIC0.92□□□□□ -2.26
CNTNAP3BQ96NU0 RNU6-133P-201ENST00000383989 107 ntBASIC0.92□□□□□ -2.26
CNTNAP3BQ96NU0 SNORD111B-201ENST00000408587 80 ntBASIC0.92□□□□□ -2.26
CNTNAP3BQ96NU0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
CNTNAP3BQ96NU0 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
CNTNAP3BQ96NU0 SNORD19-201ENST00000391191 68 ntBASIC0.91□□□□□ -2.26
CNTNAP3BQ96NU0 RNU6-1133P-201ENST00000410963 100 ntBASIC0.91□□□□□ -2.26
CNTNAP3BQ96NU0 RNU6-30P-201ENST00000384561 107 ntBASIC0.9□□□□□ -2.27
CNTNAP3BQ96NU0 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
CNTNAP3BQ96NU0 RNU6-361P-201ENST00000364454 107 ntBASIC0.89□□□□□ -2.27
CNTNAP3BQ96NU0 RNU6-900P-201ENST00000384498 102 ntBASIC0.89□□□□□ -2.27
CNTNAP3BQ96NU0 RNU6-485P-201ENST00000363475 107 ntBASIC0.88□□□□□ -2.27
CNTNAP3BQ96NU0 Y_RNA.699-201ENST00000516803 93 ntBASIC0.88□□□□□ -2.27
CNTNAP3BQ96NU0 SNORA42.1-201ENST00000363515 137 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms