Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNA5SP266-201ENST00000410273 108 ntBASIC0.14□□□□□ -2.39
KRT40Q6A162 RNA5SP215-201ENST00000363440 122 ntBASIC0.13□□□□□ -2.39
KRT40Q6A162 MIR548C-201ENST00000384815 97 ntBASIC0.13□□□□□ -2.39
KRT40Q6A162 RNA5SP67-201ENST00000516422 131 ntBASIC0.13□□□□□ -2.39
KRT40Q6A162 SNORD115-23-201ENST00000364461 82 ntBASIC0.12□□□□□ -2.39
KRT40Q6A162 MIR9-2-201ENST00000384838 87 ntBASIC0.11□□□□□ -2.39
KRT40Q6A162 MIR519A2-201ENST00000384990 87 ntBASIC0.11□□□□□ -2.39
KRT40Q6A162 AC244250.2-201ENST00000418731 148 ntBASIC0.11□□□□□ -2.39
KRT40Q6A162 RNU7-159P-201ENST00000459284 62 ntBASIC0.11□□□□□ -2.39
KRT40Q6A162 AC104692.1-201ENST00000472406 90 ntBASIC0.11□□□□□ -2.39
KRT40Q6A162 RNU6-518P-201ENST00000516056 96 ntBASIC0.11□□□□□ -2.39
KRT40Q6A162 MIR548V-201ENST00000584165 80 ntBASIC0.11□□□□□ -2.39
KRT40Q6A162 U4.4-201ENST00000620626 117 ntBASIC0.11□□□□□ -2.39
KRT40Q6A162 MIR371B-201ENST00000638082 66 ntBASIC0.11□□□□□ -2.39
KRT40Q6A162 Y_RNA.457-201ENST00000384237 111 ntBASIC0.09□□□□□ -2.4
KRT40Q6A162 RNU6-929P-201ENST00000384429 107 ntBASIC0.09□□□□□ -2.4
KRT40Q6A162 MIR517B-201ENST00000385102 67 ntBASIC0.09□□□□□ -2.4
KRT40Q6A162 RNU6-1246P-201ENST00000391064 107 ntBASIC0.09□□□□□ -2.4
KRT40Q6A162 RNU7-55P-201ENST00000459426 62 ntBASIC0.09□□□□□ -2.4
KRT40Q6A162 MIR4667-201ENST00000578933 66 ntBASIC0.09□□□□□ -2.4
KRT40Q6A162 MIR655-201ENST00000362159 97 ntBASIC0.08□□□□□ -2.4
KRT40Q6A162 MIR630-201ENST00000384957 97 ntBASIC0.08□□□□□ -2.4
KRT40Q6A162 MIR548AG1-201ENST00000579932 66 ntBASIC0.08□□□□□ -2.4
KRT40Q6A162 RNU6-698P-201ENST00000363523 107 ntBASIC0.07□□□□□ -2.4
KRT40Q6A162 RNU6-34P-201ENST00000364874 107 ntBASIC0.07□□□□□ -2.4
KRT40Q6A162 RNU6-590P-201ENST00000365039 107 ntBASIC0.07□□□□□ -2.4
KRT40Q6A162 RNU6-455P-201ENST00000384681 107 ntBASIC0.07□□□□□ -2.4
KRT40Q6A162 AL021921.1-201ENST00000442774 93 ntBASIC0.07□□□□□ -2.4
KRT40Q6A162 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.07□□□□□ -2.4
KRT40Q6A162 RNU6-542P-201ENST00000516405 103 ntBASIC0.07□□□□□ -2.4
KRT40Q6A162 MIR4511-201ENST00000582784 87 ntBASIC0.07□□□□□ -2.4
KRT40Q6A162 MIR4290-201ENST00000583807 95 ntBASIC0.07□□□□□ -2.4
KRT40Q6A162 MIR101-1-201ENST00000362265 75 ntBASIC0.06□□□□□ -2.4
KRT40Q6A162 RNU6-900P-201ENST00000384498 102 ntBASIC0.06□□□□□ -2.4
KRT40Q6A162 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
KRT40Q6A162 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.05□□□□□ -2.4
KRT40Q6A162 RNU7-154P-201ENST00000516194 62 ntBASIC0.05□□□□□ -2.4
KRT40Q6A162 RNU6-471P-201ENST00000383944 106 ntBASIC0.04□□□□□ -2.4
KRT40Q6A162 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
KRT40Q6A162 Y_RNA.610-201ENST00000410681 103 ntBASIC0.04□□□□□ -2.4
KRT40Q6A162 SCARNA21.1-201ENST00000515996 128 ntBASIC0.04□□□□□ -2.4
KRT40Q6A162 MIR4723-201ENST00000585070 81 ntBASIC0.04□□□□□ -2.4
KRT40Q6A162 AL353803.5-201ENST00000599815 141 ntBASIC0.04□□□□□ -2.4
KRT40Q6A162 uc_338.36-201ENST00000622331 158 ntBASIC0.04□□□□□ -2.4
KRT40Q6A162 Y_RNA.246-201ENST00000364495 108 ntBASIC0.03□□□□□ -2.4
KRT40Q6A162 Y_RNA.325-201ENST00000365171 122 ntBASIC0.03□□□□□ -2.4
KRT40Q6A162 RNU6-302P-201ENST00000365249 107 ntBASIC0.03□□□□□ -2.4
KRT40Q6A162 RNA5SP470-201ENST00000516463 106 ntBASIC0.03□□□□□ -2.4
KRT40Q6A162 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
KRT40Q6A162 RNU6-973P-201ENST00000364690 107 ntBASIC0.02□□□□□ -2.41
KRT40Q6A162 MIR1468-201ENST00000410600 86 ntBASIC0.02□□□□□ -2.41
KRT40Q6A162 AL391099.1-201ENST00000624635 187 ntBASIC0.02□□□□□ -2.41
KRT40Q6A162 AC103706.3-201ENST00000636297 85 ntBASIC0.02□□□□□ -2.41
KRT40Q6A162 SNORD49B-201ENST00000365172 72 ntBASIC0.01□□□□□ -2.41
KRT40Q6A162 MIR4432-201ENST00000581823 84 ntBASIC0.01□□□□□ -2.41
KRT40Q6A162 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.01□□□□□ -2.41
KRT40Q6A162 SNORD56B-201ENST00000384713 71 ntBASIC0□□□□□ -2.41
KRT40Q6A162 MIR214-201ENST00000385214 110 ntBASIC0□□□□□ -2.41
KRT40Q6A162 AC096531.1-201ENST00000419107 107 ntBASIC0□□□□□ -2.41
KRT40Q6A162 MIR4464-201ENST00000580818 92 ntBASIC-0.01□□□□□ -2.41
KRT40Q6A162 MIR4645-201ENST00000583158 77 ntBASIC-0.01□□□□□ -2.41
KRT40Q6A162 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.02□□□□□ -2.41
KRT40Q6A162 RNU6-46P-201ENST00000383860 107 ntBASIC-0.02□□□□□ -2.41
KRT40Q6A162 RNU6-788P-201ENST00000390967 104 ntBASIC-0.02□□□□□ -2.41
KRT40Q6A162 SNORD113-2-201ENST00000391082 72 ntBASIC-0.02□□□□□ -2.41
KRT40Q6A162 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.02□□□□□ -2.41
KRT40Q6A162 MIR5704-201ENST00000584029 77 ntBASIC-0.02□□□□□ -2.41
KRT40Q6A162 snoR1.1-201ENST00000628177 80 ntBASIC-0.02□□□□□ -2.41
KRT40Q6A162 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.03□□□□□ -2.41
KRT40Q6A162 RPS29P8-201ENST00000445109 171 ntBASIC-0.03□□□□□ -2.41
KRT40Q6A162 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.03□□□□□ -2.41
KRT40Q6A162 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.04□□□□□ -2.42
KRT40Q6A162 AC110620.1-201ENST00000416042 228 ntBASIC-0.04□□□□□ -2.42
KRT40Q6A162 MIR8068-201ENST00000618032 68 ntBASIC-0.04□□□□□ -2.42
KRT40Q6A162 SNORA25.5-201ENST00000363782 126 ntBASIC-0.05□□□□□ -2.42
KRT40Q6A162 RNA5SP192-201ENST00000364404 120 ntBASIC-0.05□□□□□ -2.42
KRT40Q6A162 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.05□□□□□ -2.42
KRT40Q6A162 SNORA41B-201ENST00000384785 128 ntBASIC-0.05□□□□□ -2.42
KRT40Q6A162 RNU6-92P-201ENST00000605893 104 ntBASIC-0.05□□□□□ -2.42
KRT40Q6A162 MIR6888-201ENST00000621977 67 ntBASIC-0.05□□□□□ -2.42
KRT40Q6A162 SNX3P1X-201ENST00000414887 175 ntBASIC-0.06□□□□□ -2.42
KRT40Q6A162 SNORD114-28-201ENST00000363610 72 ntBASIC-0.07□□□□□ -2.42
KRT40Q6A162 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
KRT40Q6A162 AC125388.1-201ENST00000459631 156 ntBASIC-0.07□□□□□ -2.42
KRT40Q6A162 SNORD60.1-201ENST00000362451 73 ntBASIC-0.08□□□□□ -2.42
KRT40Q6A162 RNU6-669P-201ENST00000365575 107 ntBASIC-0.08□□□□□ -2.42
KRT40Q6A162 RNA5SP451-201ENST00000410588 110 ntBASIC-0.08□□□□□ -2.42
KRT40Q6A162 MIR548AX-201ENST00000580117 73 ntBASIC-0.08□□□□□ -2.42
KRT40Q6A162 MIR4280-201ENST00000582178 76 ntBASIC-0.08□□□□□ -2.42
KRT40Q6A162 AL590491.3-201ENST00000610731 82 ntBASIC-0.08□□□□□ -2.42
KRT40Q6A162 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.09□□□□□ -2.42
KRT40Q6A162 RNU6-246P-201ENST00000384702 107 ntBASIC-0.09□□□□□ -2.42
KRT40Q6A162 AC114755.3-201ENST00000481111 251 ntBASIC-0.09□□□□□ -2.42
KRT40Q6A162 AL445584.3-201ENST00000617173 78 ntBASIC-0.09□□□□□ -2.42
KRT40Q6A162 RNU6-901P-201ENST00000384593 106 ntBASIC-0.1□□□□□ -2.43
KRT40Q6A162 MIR224-201ENST00000384889 81 ntBASIC-0.1□□□□□ -2.43
KRT40Q6A162 SNORD57-201ENST00000448188 72 ntBASIC-0.1□□□□□ -2.43
KRT40Q6A162 AL445193.1-201ENST00000441183 141 ntBASIC-0.11□□□□□ -2.43
KRT40Q6A162 MIR6854-201ENST00000614935 69 ntBASIC-0.11□□□□□ -2.43
KRT40Q6A162 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms