Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RNU7-55P-201ENST00000459426 62 ntBASIC0.94□□□□□ -2.26
RNFT1Q5M7Z0 RNU4-54P-201ENST00000516428 129 ntBASIC0.94□□□□□ -2.26
RNFT1Q5M7Z0 AL391099.1-201ENST00000624635 187 ntBASIC0.94□□□□□ -2.26
RNFT1Q5M7Z0 RNU6-973P-201ENST00000364690 107 ntBASIC0.93□□□□□ -2.26
RNFT1Q5M7Z0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.93□□□□□ -2.26
RNFT1Q5M7Z0 MIR1468-201ENST00000410600 86 ntBASIC0.93□□□□□ -2.26
RNFT1Q5M7Z0 RNU6-863P-201ENST00000515989 104 ntBASIC0.93□□□□□ -2.26
RNFT1Q5M7Z0 RNA5SP480-201ENST00000516840 109 ntBASIC0.93□□□□□ -2.26
RNFT1Q5M7Z0 AC138207.3-201ENST00000585289 166 ntBASIC0.93□□□□□ -2.26
RNFT1Q5M7Z0 MIR6515-201ENST00000619843 57 ntBASIC0.93□□□□□ -2.26
RNFT1Q5M7Z0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.92□□□□□ -2.26
RNFT1Q5M7Z0 RNU6-1133P-201ENST00000410963 100 ntBASIC0.92□□□□□ -2.26
RNFT1Q5M7Z0 AC022709.1-201ENST00000615967 87 ntBASIC0.92□□□□□ -2.26
RNFT1Q5M7Z0 SNORD114-26-201ENST00000363543 72 ntBASIC0.91□□□□□ -2.26
RNFT1Q5M7Z0 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
RNFT1Q5M7Z0 Y_RNA.345-201ENST00000365384 92 ntBASIC0.91□□□□□ -2.26
RNFT1Q5M7Z0 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
RNFT1Q5M7Z0 MIR1285-1-201ENST00000408593 84 ntBASIC0.91□□□□□ -2.26
RNFT1Q5M7Z0 MIR548J-201ENST00000408833 112 ntBASIC0.91□□□□□ -2.26
RNFT1Q5M7Z0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.91□□□□□ -2.26
RNFT1Q5M7Z0 MIR151B-201ENST00000584249 96 ntBASIC0.91□□□□□ -2.26
RNFT1Q5M7Z0 MIR6788-201ENST00000618842 66 ntBASIC0.91□□□□□ -2.26
RNFT1Q5M7Z0 MIR4317-201ENST00000637586 65 ntBASIC0.91□□□□□ -2.26
RNFT1Q5M7Z0 RNU6-1238P-201ENST00000517215 102 ntBASIC0.9□□□□□ -2.27
RNFT1Q5M7Z0 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
RNFT1Q5M7Z0 MIR6507-201ENST00000613630 70 ntBASIC0.9□□□□□ -2.27
RNFT1Q5M7Z0 RNU6-1047P-201ENST00000364418 107 ntBASIC0.89□□□□□ -2.27
RNFT1Q5M7Z0 AC096531.1-201ENST00000419107 107 ntBASIC0.89□□□□□ -2.27
RNFT1Q5M7Z0 RNU6-732P-201ENST00000516033 103 ntBASIC0.89□□□□□ -2.27
RNFT1Q5M7Z0 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
RNFT1Q5M7Z0 MIR499B-201ENST00000636498 73 ntBASIC0.89□□□□□ -2.27
RNFT1Q5M7Z0 RNU6-110P-201ENST00000384508 104 ntBASIC0.88□□□□□ -2.27
RNFT1Q5M7Z0 MIR598-201ENST00000384868 97 ntBASIC0.88□□□□□ -2.27
RNFT1Q5M7Z0 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
RNFT1Q5M7Z0 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
RNFT1Q5M7Z0 SNORA27.2-201ENST00000363365 126 ntBASIC0.87□□□□□ -2.27
RNFT1Q5M7Z0 RNU6-900P-201ENST00000384498 102 ntBASIC0.87□□□□□ -2.27
RNFT1Q5M7Z0 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
RNFT1Q5M7Z0 uc_338.36-201ENST00000622331 158 ntBASIC0.86□□□□□ -2.27
RNFT1Q5M7Z0 AC108740.1-201ENST00000498629 225 ntBASIC0.85□□□□□ -2.27
RNFT1Q5M7Z0 RNU7-129P-201ENST00000516128 62 ntBASIC0.85□□□□□ -2.27
RNFT1Q5M7Z0 Y_RNA.699-201ENST00000516803 93 ntBASIC0.85□□□□□ -2.27
RNFT1Q5M7Z0 MIR4426-201ENST00000640330 63 ntBASIC0.85□□□□□ -2.27
RNFT1Q5M7Z0 Y_RNA.206-201ENST00000364136 102 ntBASIC0.84□□□□□ -2.27
RNFT1Q5M7Z0 RNU6-258P-201ENST00000390884 101 ntBASIC0.84□□□□□ -2.27
RNFT1Q5M7Z0 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
RNFT1Q5M7Z0 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
RNFT1Q5M7Z0 uc_338.17-201ENST00000619633 179 ntBASIC0.84□□□□□ -2.27
RNFT1Q5M7Z0 RNA5SP436-201ENST00000516020 115 ntBASIC0.83□□□□□ -2.28
RNFT1Q5M7Z0 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
RNFT1Q5M7Z0 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
RNFT1Q5M7Z0 RNU6-361P-201ENST00000364454 107 ntBASIC0.81□□□□□ -2.28
RNFT1Q5M7Z0 RNU6-133P-201ENST00000383989 107 ntBASIC0.81□□□□□ -2.28
RNFT1Q5M7Z0 MIR520D-201ENST00000385002 87 ntBASIC0.81□□□□□ -2.28
RNFT1Q5M7Z0 CYP3A137P-201ENST00000562436 69 ntBASIC0.81□□□□□ -2.28
RNFT1Q5M7Z0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.8□□□□□ -2.28
RNFT1Q5M7Z0 MIR5000-201ENST00000577717 103 ntBASIC0.8□□□□□ -2.28
RNFT1Q5M7Z0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.8□□□□□ -2.28
RNFT1Q5M7Z0 SNORA42.1-201ENST00000363515 137 ntBASIC0.79□□□□□ -2.28
RNFT1Q5M7Z0 SNORD19-201ENST00000391191 68 ntBASIC0.79□□□□□ -2.28
RNFT1Q5M7Z0 MIR548Q-201ENST00000408404 100 ntBASIC0.79□□□□□ -2.28
RNFT1Q5M7Z0 RNU6-1233P-201ENST00000362922 102 ntBASIC0.78□□□□□ -2.28
RNFT1Q5M7Z0 SNORD44.1-201ENST00000363202 61 ntBASIC0.78□□□□□ -2.28
RNFT1Q5M7Z0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
RNFT1Q5M7Z0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.78□□□□□ -2.28
RNFT1Q5M7Z0 MIR6779-201ENST00000617283 64 ntBASIC0.78□□□□□ -2.28
RNFT1Q5M7Z0 RNU6-455P-201ENST00000384681 107 ntBASIC0.76□□□□□ -2.29
RNFT1Q5M7Z0 RNY1P9-201ENST00000532431 109 ntBASIC0.76□□□□□ -2.29
RNFT1Q5M7Z0 MIR6854-201ENST00000614935 69 ntBASIC0.76□□□□□ -2.29
RNFT1Q5M7Z0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
RNFT1Q5M7Z0 MIR5704-201ENST00000584029 77 ntBASIC0.75□□□□□ -2.29
RNFT1Q5M7Z0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RNFT1Q5M7Z0 RNA5SP325-201ENST00000363756 130 ntBASIC0.74□□□□□ -2.29
RNFT1Q5M7Z0 RNU6-127P-201ENST00000390897 107 ntBASIC0.74□□□□□ -2.29
RNFT1Q5M7Z0 RNU6-176P-201ENST00000517196 105 ntBASIC0.74□□□□□ -2.29
RNFT1Q5M7Z0 RNA5SP169-201ENST00000517268 117 ntBASIC0.74□□□□□ -2.29
RNFT1Q5M7Z0 CR383656.4-201ENST00000546909 122 ntBASIC0.74□□□□□ -2.29
RNFT1Q5M7Z0 MIR8068-201ENST00000618032 68 ntBASIC0.74□□□□□ -2.29
RNFT1Q5M7Z0 MIR6514-201ENST00000622549 70 ntBASIC0.74□□□□□ -2.29
RNFT1Q5M7Z0 MIR148A-201ENST00000362215 68 ntBASIC0.73□□□□□ -2.29
RNFT1Q5M7Z0 RNU6-300P-201ENST00000459080 104 ntBASIC0.73□□□□□ -2.29
RNFT1Q5M7Z0 RN7SL793P-201ENST00000583259 296 ntBASIC0.73□□□□□ -2.29
RNFT1Q5M7Z0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
RNFT1Q5M7Z0 MIR124-2-201ENST00000385081 109 ntBASIC0.72□□□□□ -2.29
RNFT1Q5M7Z0 MIR4714-201ENST00000580728 77 ntBASIC0.72□□□□□ -2.29
RNFT1Q5M7Z0 MIR216A-201ENST00000385063 110 ntBASIC0.71□□□□□ -2.3
RNFT1Q5M7Z0 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
RNFT1Q5M7Z0 SNORD111B-201ENST00000408587 80 ntBASIC0.71□□□□□ -2.3
RNFT1Q5M7Z0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
RNFT1Q5M7Z0 SNORA17.4-201ENST00000391287 132 ntBASIC0.7□□□□□ -2.3
RNFT1Q5M7Z0 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
RNFT1Q5M7Z0 MIR202-201ENST00000362219 110 ntBASIC0.69□□□□□ -2.3
RNFT1Q5M7Z0 RNU6-485P-201ENST00000363475 107 ntBASIC0.69□□□□□ -2.3
RNFT1Q5M7Z0 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
RNFT1Q5M7Z0 AC114755.3-201ENST00000481111 251 ntBASIC0.68□□□□□ -2.3
RNFT1Q5M7Z0 RNU6-180P-201ENST00000516697 61 ntBASIC0.68□□□□□ -2.3
RNFT1Q5M7Z0 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
RNFT1Q5M7Z0 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
RNFT1Q5M7Z0 RNU6-901P-201ENST00000384593 106 ntBASIC0.66□□□□□ -2.3
RNFT1Q5M7Z0 SNORD56B-201ENST00000384713 71 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms