Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 RNU6-995P-201ENST00000391244 107 ntBASIC0.82□□□□□ -2.28
ECM1Q16610 MIR876-201ENST00000401147 81 ntBASIC0.82□□□□□ -2.28
ECM1Q16610 AC098934.3-201ENST00000430450 190 ntBASIC0.82□□□□□ -2.28
ECM1Q16610 U7.5-201ENST00000517224 61 ntBASIC0.82□□□□□ -2.28
ECM1Q16610 MIR3925-201ENST00000584674 77 ntBASIC0.82□□□□□ -2.28
ECM1Q16610 MIR6888-201ENST00000621977 67 ntBASIC0.82□□□□□ -2.28
ECM1Q16610 RNA5SP436-201ENST00000516020 115 ntBASIC0.81□□□□□ -2.28
ECM1Q16610 RNU6-1174P-201ENST00000517278 101 ntBASIC0.81□□□□□ -2.28
ECM1Q16610 RNU6-721P-201ENST00000410155 105 ntBASIC0.8□□□□□ -2.28
ECM1Q16610 RNA5SP480-201ENST00000516840 109 ntBASIC0.8□□□□□ -2.28
ECM1Q16610 MIR4432-201ENST00000581823 84 ntBASIC0.8□□□□□ -2.28
ECM1Q16610 AC084368.1-201ENST00000620935 65 ntBASIC0.8□□□□□ -2.28
ECM1Q16610 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
ECM1Q16610 Y_RNA.423-201ENST00000384057 113 ntBASIC0.79□□□□□ -2.28
ECM1Q16610 MIR598-201ENST00000384868 97 ntBASIC0.79□□□□□ -2.28
ECM1Q16610 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
ECM1Q16610 RNU4-54P-201ENST00000516428 129 ntBASIC0.79□□□□□ -2.28
ECM1Q16610 AL445584.3-201ENST00000617173 78 ntBASIC0.79□□□□□ -2.28
ECM1Q16610 SNORD45.2-201ENST00000363552 72 ntBASIC0.78□□□□□ -2.28
ECM1Q16610 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
ECM1Q16610 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
ECM1Q16610 RNU6-1008P-201ENST00000384160 104 ntBASIC0.77□□□□□ -2.29
ECM1Q16610 MIR3170-201ENST00000582699 77 ntBASIC0.77□□□□□ -2.29
ECM1Q16610 PVT1_3.1-201ENST00000620853 95 ntBASIC0.77□□□□□ -2.29
ECM1Q16610 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
ECM1Q16610 SNORD114-26-201ENST00000363543 72 ntBASIC0.76□□□□□ -2.29
ECM1Q16610 MIR4714-201ENST00000580728 77 ntBASIC0.76□□□□□ -2.29
ECM1Q16610 Y_RNA.540-201ENST00000384638 111 ntBASIC0.75□□□□□ -2.29
ECM1Q16610 RNU7-88P-201ENST00000458752 63 ntBASIC0.75□□□□□ -2.29
ECM1Q16610 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.75□□□□□ -2.29
ECM1Q16610 SNORD63.1-201ENST00000516178 80 ntBASIC0.75□□□□□ -2.29
ECM1Q16610 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
ECM1Q16610 RNU7-55P-201ENST00000459426 62 ntBASIC0.73□□□□□ -2.29
ECM1Q16610 AP000676.1-201ENST00000533307 52 ntBASIC0.73□□□□□ -2.29
ECM1Q16610 RNA5SP128-201ENST00000365305 116 ntBASIC0.72□□□□□ -2.29
ECM1Q16610 MIR760-201ENST00000390220 80 ntBASIC0.72□□□□□ -2.29
ECM1Q16610 Y_RNA.613-201ENST00000410726 97 ntBASIC0.72□□□□□ -2.29
ECM1Q16610 SNORD63.2-201ENST00000516303 64 ntBASIC0.72□□□□□ -2.29
ECM1Q16610 AC104408.1-201ENST00000605241 170 ntBASIC0.72□□□□□ -2.29
ECM1Q16610 RNU6-530P-201ENST00000391180 107 ntBASIC0.71□□□□□ -2.3
ECM1Q16610 MIR499B-201ENST00000636498 73 ntBASIC0.71□□□□□ -2.3
ECM1Q16610 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
ECM1Q16610 SNORA62.4-201ENST00000365504 151 ntBASIC0.7□□□□□ -2.3
ECM1Q16610 RNU6-258P-201ENST00000390884 101 ntBASIC0.7□□□□□ -2.3
ECM1Q16610 SCARNA11.2-201ENST00000517183 154 ntBASIC0.7□□□□□ -2.3
ECM1Q16610 AC138207.3-201ENST00000585289 166 ntBASIC0.7□□□□□ -2.3
ECM1Q16610 AC090625.1-201ENST00000357130 210 ntBASIC0.69□□□□□ -2.3
ECM1Q16610 Y_RNA.321-201ENST00000365149 102 ntBASIC0.69□□□□□ -2.3
ECM1Q16610 AC096531.1-201ENST00000419107 107 ntBASIC0.69□□□□□ -2.3
ECM1Q16610 AL391099.1-201ENST00000624635 187 ntBASIC0.69□□□□□ -2.3
ECM1Q16610 snoR1.1-201ENST00000628177 80 ntBASIC0.69□□□□□ -2.3
ECM1Q16610 SNORD44.1-201ENST00000363202 61 ntBASIC0.68□□□□□ -2.3
ECM1Q16610 RNU6-973P-201ENST00000364690 107 ntBASIC0.68□□□□□ -2.3
ECM1Q16610 RNU6-1238P-201ENST00000517215 102 ntBASIC0.68□□□□□ -2.3
ECM1Q16610 MIR6513-201ENST00000621188 64 ntBASIC0.68□□□□□ -2.3
ECM1Q16610 RNA5SP98-201ENST00000363158 137 ntBASIC0.67□□□□□ -2.3
ECM1Q16610 Y_RNA.206-201ENST00000364136 102 ntBASIC0.67□□□□□ -2.3
ECM1Q16610 RNU6-1326P-201ENST00000391262 107 ntBASIC0.67□□□□□ -2.3
ECM1Q16610 MIR1468-201ENST00000410600 86 ntBASIC0.67□□□□□ -2.3
ECM1Q16610 MIR6779-201ENST00000617283 64 ntBASIC0.67□□□□□ -2.3
ECM1Q16610 RNU6-900P-201ENST00000384498 102 ntBASIC0.66□□□□□ -2.3
ECM1Q16610 MIR520D-201ENST00000385002 87 ntBASIC0.66□□□□□ -2.3
ECM1Q16610 RNU6-894P-201ENST00000517094 105 ntBASIC0.66□□□□□ -2.3
ECM1Q16610 SNORA42.1-201ENST00000363515 137 ntBASIC0.65□□□□□ -2.31
ECM1Q16610 Y_RNA.345-201ENST00000365384 92 ntBASIC0.65□□□□□ -2.31
ECM1Q16610 MIR216A-201ENST00000385063 110 ntBASIC0.65□□□□□ -2.31
ECM1Q16610 SNORD19-201ENST00000391191 68 ntBASIC0.65□□□□□ -2.31
ECM1Q16610 RNU6-732P-201ENST00000516033 103 ntBASIC0.65□□□□□ -2.31
ECM1Q16610 MIR6507-201ENST00000613630 70 ntBASIC0.65□□□□□ -2.31
ECM1Q16610 SNORA27.2-201ENST00000363365 126 ntBASIC0.63□□□□□ -2.31
ECM1Q16610 RNU6-1111P-201ENST00000391118 107 ntBASIC0.63□□□□□ -2.31
ECM1Q16610 MIR936-201ENST00000401264 98 ntBASIC0.63□□□□□ -2.31
ECM1Q16610 MIR8068-201ENST00000618032 68 ntBASIC0.63□□□□□ -2.31
ECM1Q16610 uc_338.36-201ENST00000622331 158 ntBASIC0.63□□□□□ -2.31
ECM1Q16610 RNU6-1047P-201ENST00000364418 107 ntBASIC0.62□□□□□ -2.31
ECM1Q16610 RN7SL793P-201ENST00000583259 296 ntBASIC0.62□□□□□ -2.31
ECM1Q16610 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
ECM1Q16610 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
ECM1Q16610 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
ECM1Q16610 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
ECM1Q16610 RNU6-1133P-201ENST00000410963 100 ntBASIC0.61□□□□□ -2.31
ECM1Q16610 RNU7-129P-201ENST00000516128 62 ntBASIC0.61□□□□□ -2.31
ECM1Q16610 RNA5SP325-201ENST00000363756 130 ntBASIC0.6□□□□□ -2.31
ECM1Q16610 RNU6-361P-201ENST00000364454 107 ntBASIC0.6□□□□□ -2.31
ECM1Q16610 AC108740.1-201ENST00000498629 225 ntBASIC0.6□□□□□ -2.31
ECM1Q16610 MIR4317-201ENST00000637586 65 ntBASIC0.6□□□□□ -2.31
ECM1Q16610 MIRLET7D-201ENST00000362263 87 ntBASIC0.59□□□□□ -2.31
ECM1Q16610 MIR548H2-201ENST00000408874 88 ntBASIC0.59□□□□□ -2.31
ECM1Q16610 MIR5704-201ENST00000584029 77 ntBASIC0.59□□□□□ -2.31
ECM1Q16610 AC114755.3-201ENST00000481111 251 ntBASIC0.58□□□□□ -2.32
ECM1Q16610 SNORA68.3-201ENST00000515906 83 ntBASIC0.58□□□□□ -2.32
ECM1Q16610 MIR4426-201ENST00000640330 63 ntBASIC0.58□□□□□ -2.32
ECM1Q16610 RNU6-127P-201ENST00000390897 107 ntBASIC0.57□□□□□ -2.32
ECM1Q16610 RNA5SP193-201ENST00000410353 107 ntBASIC0.57□□□□□ -2.32
ECM1Q16610 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.57□□□□□ -2.32
ECM1Q16610 RNU6-180P-201ENST00000516697 61 ntBASIC0.57□□□□□ -2.32
ECM1Q16610 Y_RNA.699-201ENST00000516803 93 ntBASIC0.57□□□□□ -2.32
ECM1Q16610 AP002795.1-201ENST00000534879 84 ntBASIC0.57□□□□□ -2.32
ECM1Q16610 MIR4711-201ENST00000578274 70 ntBASIC0.57□□□□□ -2.32
ECM1Q16610 MIR6854-201ENST00000614935 69 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 222.2 ms