Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 RNU6-303P-201ENST00000517091 106 ntBASIC-1.08□□□□□ -2.58
SMARCB1Q12824 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.09□□□□□ -2.58
SMARCB1Q12824 RNU6-755P-201ENST00000364400 103 ntBASIC-1.09□□□□□ -2.58
SMARCB1Q12824 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.09□□□□□ -2.58
SMARCB1Q12824 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.09□□□□□ -2.58
SMARCB1Q12824 RNU6-686P-201ENST00000364839 107 ntBASIC-1.1□□□□□ -2.59
SMARCB1Q12824 SNORD113-1-201ENST00000365321 69 ntBASIC-1.1□□□□□ -2.59
SMARCB1Q12824 MIR29B1-201ENST00000385015 81 ntBASIC-1.1□□□□□ -2.59
SMARCB1Q12824 AL353691.2-201ENST00000443795 59 ntBASIC-1.1□□□□□ -2.59
SMARCB1Q12824 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.11□□□□□ -2.59
SMARCB1Q12824 RNU6-675P-201ENST00000384236 104 ntBASIC-1.11□□□□□ -2.59
SMARCB1Q12824 MIR4484-201ENST00000582855 83 ntBASIC-1.11□□□□□ -2.59
SMARCB1Q12824 SNORD45.1-201ENST00000363181 77 ntBASIC-1.12□□□□□ -2.59
SMARCB1Q12824 RNU6-147P-201ENST00000383983 107 ntBASIC-1.12□□□□□ -2.59
SMARCB1Q12824 MIR507-201ENST00000385234 94 ntBASIC-1.12□□□□□ -2.59
SMARCB1Q12824 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.12□□□□□ -2.59
SMARCB1Q12824 RNU6-458P-201ENST00000384179 107 ntBASIC-1.13□□□□□ -2.59
SMARCB1Q12824 RNU6-129P-201ENST00000391022 107 ntBASIC-1.13□□□□□ -2.59
SMARCB1Q12824 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.13□□□□□ -2.59
SMARCB1Q12824 U6.58-201ENST00000613107 107 ntBASIC-1.13□□□□□ -2.59
SMARCB1Q12824 U4.4-201ENST00000620626 117 ntBASIC-1.13□□□□□ -2.59
SMARCB1Q12824 MIR5683-201ENST00000636514 76 ntBASIC-1.13□□□□□ -2.59
SMARCB1Q12824 AC006160.2-201ENST00000637708 154 ntBASIC-1.13□□□□□ -2.59
SMARCB1Q12824 RNU6-587P-201ENST00000391282 106 ntBASIC-1.14□□□□□ -2.59
SMARCB1Q12824 MIR8485-201ENST00000401372 91 ntBASIC-1.14□□□□□ -2.59
SMARCB1Q12824 RPL35AP4-201ENST00000412007 102 ntBASIC-1.14□□□□□ -2.59
SMARCB1Q12824 MIR548AX-201ENST00000580117 73 ntBASIC-1.14□□□□□ -2.59
SMARCB1Q12824 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.15□□□□□ -2.59
SMARCB1Q12824 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.15□□□□□ -2.59
SMARCB1Q12824 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.15□□□□□ -2.59
SMARCB1Q12824 SNORD20-201ENST00000384550 80 ntBASIC-1.15□□□□□ -2.59
SMARCB1Q12824 RNU6-844P-201ENST00000517175 102 ntBASIC-1.15□□□□□ -2.59
SMARCB1Q12824 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.16□□□□□ -2.6
SMARCB1Q12824 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.16□□□□□ -2.6
SMARCB1Q12824 RNU6-215P-201ENST00000365169 102 ntBASIC-1.16□□□□□ -2.6
SMARCB1Q12824 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.16□□□□□ -2.6
SMARCB1Q12824 RNU6-32P-201ENST00000383948 107 ntBASIC-1.16□□□□□ -2.6
SMARCB1Q12824 RNU6-13P-201ENST00000384248 107 ntBASIC-1.16□□□□□ -2.6
SMARCB1Q12824 RNU6-12P-201ENST00000384604 107 ntBASIC-1.16□□□□□ -2.6
SMARCB1Q12824 RNU6-41P-201ENST00000384741 107 ntBASIC-1.16□□□□□ -2.6
SMARCB1Q12824 MIR664A-201ENST00000626086 82 ntBASIC-1.16□□□□□ -2.6
SMARCB1Q12824 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.17□□□□□ -2.6
SMARCB1Q12824 RNU6-30P-201ENST00000384561 107 ntBASIC-1.17□□□□□ -2.6
SMARCB1Q12824 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.17□□□□□ -2.6
SMARCB1Q12824 RNU4-61P-201ENST00000411243 107 ntBASIC-1.17□□□□□ -2.6
SMARCB1Q12824 AL606753.1-201ENST00000427435 87 ntBASIC-1.17□□□□□ -2.6
SMARCB1Q12824 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.17□□□□□ -2.6
SMARCB1Q12824 RNU6-49P-201ENST00000384256 107 ntBASIC-1.18□□□□□ -2.6
SMARCB1Q12824 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.18□□□□□ -2.6
SMARCB1Q12824 MIR4306-201ENST00000583390 91 ntBASIC-1.18□□□□□ -2.6
SMARCB1Q12824 RNU6-598P-201ENST00000364017 105 ntBASIC-1.19□□□□□ -2.6
SMARCB1Q12824 AC090616.4-201ENST00000448026 115 ntBASIC-1.19□□□□□ -2.6
SMARCB1Q12824 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.19□□□□□ -2.6
SMARCB1Q12824 RNU6-698P-201ENST00000363523 107 ntBASIC-1.2□□□□□ -2.6
SMARCB1Q12824 RNU6-34P-201ENST00000364874 107 ntBASIC-1.2□□□□□ -2.6
SMARCB1Q12824 MIR527-201ENST00000385244 85 ntBASIC-1.2□□□□□ -2.6
SMARCB1Q12824 MIR889-201ENST00000401280 79 ntBASIC-1.2□□□□□ -2.6
SMARCB1Q12824 MIR548Q-201ENST00000408404 100 ntBASIC-1.2□□□□□ -2.6
SMARCB1Q12824 MIR548V-201ENST00000584165 80 ntBASIC-1.2□□□□□ -2.6
SMARCB1Q12824 AC091912.2-201ENST00000624798 167 ntBASIC-1.2□□□□□ -2.6
SMARCB1Q12824 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.21□□□□□ -2.6
SMARCB1Q12824 MIR630-201ENST00000384957 97 ntBASIC-1.21□□□□□ -2.6
SMARCB1Q12824 RNU6-696P-201ENST00000390834 107 ntBASIC-1.21□□□□□ -2.6
SMARCB1Q12824 RNU6-576P-201ENST00000390854 102 ntBASIC-1.21□□□□□ -2.6
SMARCB1Q12824 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.21□□□□□ -2.6
SMARCB1Q12824 MIR4490-201ENST00000582647 84 ntBASIC-1.21□□□□□ -2.6
SMARCB1Q12824 MIR6874-201ENST00000635894 71 ntBASIC-1.21□□□□□ -2.6
SMARCB1Q12824 SNORD113.1-201ENST00000363280 73 ntBASIC-1.22□□□□□ -2.6
SMARCB1Q12824 SNORD45A-201ENST00000384512 84 ntBASIC-1.22□□□□□ -2.6
SMARCB1Q12824 MIR520D-201ENST00000385002 87 ntBASIC-1.22□□□□□ -2.6
SMARCB1Q12824 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
SMARCB1Q12824 SNORD57-201ENST00000448188 72 ntBASIC-1.22□□□□□ -2.6
SMARCB1Q12824 RNU6-919P-201ENST00000516731 104 ntBASIC-1.22□□□□□ -2.6
SMARCB1Q12824 U2.18-201ENST00000622185 84 ntBASIC-1.22□□□□□ -2.6
SMARCB1Q12824 RNU6-164P-201ENST00000364604 103 ntBASIC-1.23□□□□□ -2.61
SMARCB1Q12824 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.23□□□□□ -2.61
SMARCB1Q12824 RNU6-44P-201ENST00000384045 107 ntBASIC-1.23□□□□□ -2.61
SMARCB1Q12824 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.23□□□□□ -2.61
SMARCB1Q12824 MIR1297-201ENST00000637311 77 ntBASIC-1.23□□□□□ -2.61
SMARCB1Q12824 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.24□□□□□ -2.61
SMARCB1Q12824 RNU6-24P-201ENST00000384440 107 ntBASIC-1.24□□□□□ -2.61
SMARCB1Q12824 SNORD113-2-201ENST00000391082 72 ntBASIC-1.24□□□□□ -2.61
SMARCB1Q12824 RNU6-630P-201ENST00000391258 106 ntBASIC-1.24□□□□□ -2.61
SMARCB1Q12824 MIR5588-201ENST00000581890 63 ntBASIC-1.24□□□□□ -2.61
SMARCB1Q12824 RNU6-979P-201ENST00000383896 107 ntBASIC-1.25□□□□□ -2.61
SMARCB1Q12824 RNU6-608P-201ENST00000383927 104 ntBASIC-1.25□□□□□ -2.61
SMARCB1Q12824 RNA5SP67-201ENST00000516422 131 ntBASIC-1.25□□□□□ -2.61
SMARCB1Q12824 MIR4324-201ENST00000584846 72 ntBASIC-1.25□□□□□ -2.61
SMARCB1Q12824 RNA5SP89-201ENST00000410300 108 ntBASIC-1.26□□□□□ -2.61
SMARCB1Q12824 RNU6-168P-201ENST00000516189 101 ntBASIC-1.26□□□□□ -2.61
SMARCB1Q12824 RNU6-315P-201ENST00000362666 107 ntBASIC-1.27□□□□□ -2.61
SMARCB1Q12824 SNORA41B-201ENST00000384785 128 ntBASIC-1.27□□□□□ -2.61
SMARCB1Q12824 MTND4LP1-201ENST00000446263 157 ntBASIC-1.27□□□□□ -2.61
SMARCB1Q12824 RNU6-668P-201ENST00000364180 107 ntBASIC-1.28□□□□□ -2.61
SMARCB1Q12824 RNY1P1-201ENST00000364372 112 ntBASIC-1.28□□□□□ -2.61
SMARCB1Q12824 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.28□□□□□ -2.61
SMARCB1Q12824 MIR8053-201ENST00000613344 75 ntBASIC-1.28□□□□□ -2.61
SMARCB1Q12824 IGLL4P-201ENST00000614590 133 ntBASIC-1.28□□□□□ -2.61
SMARCB1Q12824 RNA5SP215-201ENST00000363440 122 ntBASIC-1.29□□□□□ -2.62
SMARCB1Q12824 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 3406.9 ms