Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.96□□□□□ -3.04
HIST1H1AQ02539 MIR5693-201ENST00000577722 73 ntBASIC-3.96□□□□□ -3.04
HIST1H1AQ02539 MIR3675-201ENST00000583661 73 ntBASIC-3.96□□□□□ -3.04
HIST1H1AQ02539 RNU6-474P-201ENST00000384243 107 ntBASIC-3.97□□□□□ -3.04
HIST1H1AQ02539 RNU6-604P-201ENST00000390917 100 ntBASIC-3.98□□□□□ -3.05
HIST1H1AQ02539 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.98□□□□□ -3.05
HIST1H1AQ02539 U7.2-201ENST00000607576 63 ntBASIC-3.98□□□□□ -3.05
HIST1H1AQ02539 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.99□□□□□ -3.05
HIST1H1AQ02539 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.99□□□□□ -3.05
HIST1H1AQ02539 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.99□□□□□ -3.05
HIST1H1AQ02539 MIR579-201ENST00000385221 98 ntBASIC-3.99□□□□□ -3.05
HIST1H1AQ02539 SNORA81.3-201ENST00000517283 198 ntBASIC-3.99□□□□□ -3.05
HIST1H1AQ02539 RNU6-623P-201ENST00000363143 105 ntBASIC-4□□□□□ -3.05
HIST1H1AQ02539 SNORA33.2-201ENST00000365413 134 ntBASIC-4□□□□□ -3.05
HIST1H1AQ02539 SNORA41B-201ENST00000384785 128 ntBASIC-4□□□□□ -3.05
HIST1H1AQ02539 MIR513C-201ENST00000401352 84 ntBASIC-4□□□□□ -3.05
HIST1H1AQ02539 MIR7978-201ENST00000636158 59 ntBASIC-4□□□□□ -3.05
HIST1H1AQ02539 SNORD60-201ENST00000383903 83 ntBASIC-4.01□□□□□ -3.05
HIST1H1AQ02539 RNU6-1137P-201ENST00000517073 99 ntBASIC-4.01□□□□□ -3.05
HIST1H1AQ02539 AC022559.1-201ENST00000520905 205 ntBASIC-4.01□□□□□ -3.05
HIST1H1AQ02539 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-4.01□□□□□ -3.05
HIST1H1AQ02539 AP000770.2-201ENST00000623694 100 ntBASIC-4.01□□□□□ -3.05
HIST1H1AQ02539 RNU6-330P-201ENST00000363015 107 ntBASIC-4.02□□□□□ -3.05
HIST1H1AQ02539 RNU6-1135P-201ENST00000411083 103 ntBASIC-4.02□□□□□ -3.05
HIST1H1AQ02539 MIR125B1-201ENST00000385236 88 ntBASIC-4.03□□□□□ -3.05
HIST1H1AQ02539 RNY4P18-201ENST00000391107 89 ntBASIC-4.03□□□□□ -3.05
HIST1H1AQ02539 RNU6-985P-201ENST00000410182 104 ntBASIC-4.03□□□□□ -3.05
HIST1H1AQ02539 RNY4P25-201ENST00000459254 96 ntBASIC-4.03□□□□□ -3.05
HIST1H1AQ02539 RNA5SP215-201ENST00000363440 122 ntBASIC-4.04□□□□□ -3.06
HIST1H1AQ02539 RNU6-106P-201ENST00000384405 107 ntBASIC-4.04□□□□□ -3.06
HIST1H1AQ02539 SCARNA23-201ENST00000516060 130 ntBASIC-4.04□□□□□ -3.06
HIST1H1AQ02539 RNU6-1227P-201ENST00000383981 107 ntBASIC-4.05□□□□□ -3.06
HIST1H1AQ02539 RNU4-71P-201ENST00000516258 113 ntBASIC-4.05□□□□□ -3.06
HIST1H1AQ02539 AC141273.2-201ENST00000618989 130 ntBASIC-4.05□□□□□ -3.06
HIST1H1AQ02539 Y_RNA.778-201ENST00000620203 90 ntBASIC-4.05□□□□□ -3.06
HIST1H1AQ02539 SNORD45.1-201ENST00000363181 77 ntBASIC-4.06□□□□□ -3.06
HIST1H1AQ02539 MIR548N-201ENST00000408742 75 ntBASIC-4.06□□□□□ -3.06
HIST1H1AQ02539 AL589823.1-201ENST00000429577 183 ntBASIC-4.06□□□□□ -3.06
HIST1H1AQ02539 MTND4LP1-201ENST00000446263 157 ntBASIC-4.06□□□□□ -3.06
HIST1H1AQ02539 Y_RNA.812-201ENST00000610788 101 ntBASIC-4.06□□□□□ -3.06
HIST1H1AQ02539 Y_RNA.784-201ENST00000613803 101 ntBASIC-4.06□□□□□ -3.06
HIST1H1AQ02539 Y_RNA.787-201ENST00000616522 101 ntBASIC-4.06□□□□□ -3.06
HIST1H1AQ02539 Y_RNA.780-201ENST00000617336 101 ntBASIC-4.06□□□□□ -3.06
HIST1H1AQ02539 Y_RNA.801-201ENST00000619005 101 ntBASIC-4.06□□□□□ -3.06
HIST1H1AQ02539 RNU6-834P-201ENST00000362367 110 ntBASIC-4.07□□□□□ -3.06
HIST1H1AQ02539 RNU6-1277P-201ENST00000364561 107 ntBASIC-4.07□□□□□ -3.06
HIST1H1AQ02539 RNA5SP173-201ENST00000364857 136 ntBASIC-4.07□□□□□ -3.06
HIST1H1AQ02539 RNU6-974P-201ENST00000384099 108 ntBASIC-4.07□□□□□ -3.06
HIST1H1AQ02539 SNORA8.1-201ENST00000384250 140 ntBASIC-4.07□□□□□ -3.06
HIST1H1AQ02539 RNU6-635P-201ENST00000516651 102 ntBASIC-4.07□□□□□ -3.06
HIST1H1AQ02539 MIR4795-201ENST00000584182 89 ntBASIC-4.07□□□□□ -3.06
HIST1H1AQ02539 Y_RNA.20-201ENST00000362479 113 ntBASIC-4.08□□□□□ -3.06
HIST1H1AQ02539 RNU6-520P-201ENST00000384717 104 ntBASIC-4.08□□□□□ -3.06
HIST1H1AQ02539 RNU6-172P-201ENST00000411000 93 ntBASIC-4.08□□□□□ -3.06
HIST1H1AQ02539 MIR202-201ENST00000362219 110 ntBASIC-4.09□□□□□ -3.06
HIST1H1AQ02539 Y_RNA.272-201ENST00000364696 102 ntBASIC-4.09□□□□□ -3.06
HIST1H1AQ02539 Y_RNA.431-201ENST00000384086 102 ntBASIC-4.09□□□□□ -3.06
HIST1H1AQ02539 MIR519C-201ENST00000385053 87 ntBASIC-4.09□□□□□ -3.06
HIST1H1AQ02539 RNU6-182P-201ENST00000516970 105 ntBASIC-4.09□□□□□ -3.06
HIST1H1AQ02539 Y_RNA.79-201ENST00000362992 113 ntBASIC-4.1□□□□□ -3.07
HIST1H1AQ02539 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-4.1□□□□□ -3.07
HIST1H1AQ02539 RNU6-912P-201ENST00000363800 104 ntBASIC-4.11□□□□□ -3.07
HIST1H1AQ02539 RNU6-649P-201ENST00000384463 107 ntBASIC-4.11□□□□□ -3.07
HIST1H1AQ02539 Y_RNA.830-201ENST00000628531 96 ntBASIC-4.11□□□□□ -3.07
HIST1H1AQ02539 Y_RNA.134-201ENST00000363435 105 ntBASIC-4.12□□□□□ -3.07
HIST1H1AQ02539 Y_RNA.139-201ENST00000363464 102 ntBASIC-4.12□□□□□ -3.07
HIST1H1AQ02539 RNU6-129P-201ENST00000391022 107 ntBASIC-4.12□□□□□ -3.07
HIST1H1AQ02539 Y_RNA.649-201ENST00000459077 103 ntBASIC-4.12□□□□□ -3.07
HIST1H1AQ02539 RNU6-971P-201ENST00000516920 106 ntBASIC-4.12□□□□□ -3.07
HIST1H1AQ02539 RNU6-303P-201ENST00000517091 106 ntBASIC-4.12□□□□□ -3.07
HIST1H1AQ02539 RNU6-828P-201ENST00000364876 107 ntBASIC-4.13□□□□□ -3.07
HIST1H1AQ02539 RNU6-875P-201ENST00000516488 106 ntBASIC-4.13□□□□□ -3.07
HIST1H1AQ02539 AC072026.1-201ENST00000605023 201 ntBASIC-4.13□□□□□ -3.07
HIST1H1AQ02539 RNU6-668P-201ENST00000364180 107 ntBASIC-4.14□□□□□ -3.07
HIST1H1AQ02539 Y_RNA.459-201ENST00000384251 102 ntBASIC-4.14□□□□□ -3.07
HIST1H1AQ02539 RNU6-574P-201ENST00000384265 107 ntBASIC-4.14□□□□□ -3.07
HIST1H1AQ02539 AL731768.1-201ENST00000603124 139 ntBASIC-4.14□□□□□ -3.07
HIST1H1AQ02539 AL157777.2-201ENST00000258070 137 ntBASIC-4.15□□□□□ -3.07
HIST1H1AQ02539 Y_RNA.200-201ENST00000364018 102 ntBASIC-4.15□□□□□ -3.07
HIST1H1AQ02539 Y_RNA.240-201ENST00000364469 95 ntBASIC-4.15□□□□□ -3.07
HIST1H1AQ02539 RNU6-904P-201ENST00000516206 101 ntBASIC-4.15□□□□□ -3.07
HIST1H1AQ02539 RNU4-40P-201ENST00000364351 143 ntBASIC-4.16□□□□□ -3.08
HIST1H1AQ02539 RNU6-530P-201ENST00000391180 107 ntBASIC-4.16□□□□□ -3.08
HIST1H1AQ02539 RNU6-772P-201ENST00000516042 105 ntBASIC-4.16□□□□□ -3.08
HIST1H1AQ02539 MIRLET7A3-201ENST00000362116 74 ntBASIC-4.17□□□□□ -3.08
HIST1H1AQ02539 RNU6-624P-201ENST00000363411 107 ntBASIC-4.17□□□□□ -3.08
HIST1H1AQ02539 RNU7-61P-201ENST00000515897 61 ntBASIC-4.17□□□□□ -3.08
HIST1H1AQ02539 MIR548X2-201ENST00000579776 100 ntBASIC-4.17□□□□□ -3.08
HIST1H1AQ02539 MIR3908-201ENST00000579798 126 ntBASIC-4.17□□□□□ -3.08
HIST1H1AQ02539 SNORA17.4-201ENST00000391287 132 ntBASIC-4.18□□□□□ -3.08
HIST1H1AQ02539 SNORD115-37-201ENST00000363768 82 ntBASIC-4.19□□□□□ -3.08
HIST1H1AQ02539 Y_RNA.216-201ENST00000364205 93 ntBASIC-4.19□□□□□ -3.08
HIST1H1AQ02539 Y_RNA.307-201ENST00000365022 117 ntBASIC-4.19□□□□□ -3.08
HIST1H1AQ02539 AC134503.1-201ENST00000633048 54 ntBASIC-4.19□□□□□ -3.08
HIST1H1AQ02539 AC074348.1-201ENST00000426503 132 ntBASIC-4.2□□□□□ -3.08
HIST1H1AQ02539 Y_RNA.680-201ENST00000516441 93 ntBASIC-4.2□□□□□ -3.08
HIST1H1AQ02539 MTND4P29-201ENST00000503122 1372 ntBASIC-4.2□□□□□ -3.08
HIST1H1AQ02539 Y_RNA.478-201ENST00000384358 107 ntBASIC-4.21□□□□□ -3.08
HIST1H1AQ02539 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.22□□□□□ -3.08
HIST1H1AQ02539 Y_RNA.574-201ENST00000384766 95 ntBASIC-4.22□□□□□ -3.08
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms