Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 SNORD116-19-201ENST00000384729 92 ntBASIC-1.67□□□□□ -2.68
CNTNAP1P78357 MIR1302-5-201ENST00000408164 150 ntBASIC-1.67□□□□□ -2.68
CNTNAP1P78357 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.67□□□□□ -2.68
CNTNAP1P78357 RNA5SP405-201ENST00000363059 114 ntBASIC-1.68□□□□□ -2.68
CNTNAP1P78357 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
CNTNAP1P78357 RNU6-340P-201ENST00000364005 107 ntBASIC-1.69□□□□□ -2.68
CNTNAP1P78357 RNU2-51P-201ENST00000410708 197 ntBASIC-1.69□□□□□ -2.68
CNTNAP1P78357 AL353691.2-201ENST00000443795 59 ntBASIC-1.69□□□□□ -2.68
CNTNAP1P78357 RNU7-61P-201ENST00000515897 61 ntBASIC-1.69□□□□□ -2.68
CNTNAP1P78357 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.7□□□□□ -2.68
CNTNAP1P78357 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 RNU6-194P-201ENST00000363862 105 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 MIR590-201ENST00000385008 97 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 RNU6-907P-201ENST00000390924 102 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.72□□□□□ -2.68
CNTNAP1P78357 SNORD115-22-201ENST00000364456 82 ntBASIC-1.72□□□□□ -2.69
CNTNAP1P78357 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.72□□□□□ -2.69
CNTNAP1P78357 RNU7-153P-201ENST00000516455 62 ntBASIC-1.72□□□□□ -2.69
CNTNAP1P78357 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.73□□□□□ -2.69
CNTNAP1P78357 SNORD77.2-201ENST00000391045 68 ntBASIC-1.73□□□□□ -2.69
CNTNAP1P78357 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.73□□□□□ -2.69
CNTNAP1P78357 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.74□□□□□ -2.69
CNTNAP1P78357 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.74□□□□□ -2.69
CNTNAP1P78357 AL078595.1-201ENST00000404458 226 ntBASIC-1.74□□□□□ -2.69
CNTNAP1P78357 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.74□□□□□ -2.69
CNTNAP1P78357 U7.3-201ENST00000616123 62 ntBASIC-1.74□□□□□ -2.69
CNTNAP1P78357 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.75□□□□□ -2.69
CNTNAP1P78357 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.75□□□□□ -2.69
CNTNAP1P78357 AL035461.1-201ENST00000421490 332 ntBASIC-1.75□□□□□ -2.69
CNTNAP1P78357 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.75□□□□□ -2.69
CNTNAP1P78357 MIR519C-201ENST00000385053 87 ntBASIC-1.76□□□□□ -2.69
CNTNAP1P78357 RNU6-807P-201ENST00000516805 107 ntBASIC-1.76□□□□□ -2.69
CNTNAP1P78357 SNORD115-27-201ENST00000364430 82 ntBASIC-1.77□□□□□ -2.69
CNTNAP1P78357 RNU6-164P-201ENST00000364604 103 ntBASIC-1.77□□□□□ -2.69
CNTNAP1P78357 RNU6-656P-201ENST00000516785 107 ntBASIC-1.77□□□□□ -2.69
CNTNAP1P78357 MTATP8P2-201ENST00000435212 202 ntBASIC-1.78□□□□□ -2.69
CNTNAP1P78357 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.79□□□□□ -2.7
CNTNAP1P78357 RNU6-162P-201ENST00000516228 103 ntBASIC-1.79□□□□□ -2.7
CNTNAP1P78357 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
CNTNAP1P78357 U2.7-201ENST00000619197 100 ntBASIC-1.8□□□□□ -2.7
CNTNAP1P78357 RNA5SP26-201ENST00000362406 119 ntBASIC-1.81□□□□□ -2.7
CNTNAP1P78357 RNU6-106P-201ENST00000384405 107 ntBASIC-1.81□□□□□ -2.7
CNTNAP1P78357 RNU6-554P-201ENST00000410466 106 ntBASIC-1.81□□□□□ -2.7
CNTNAP1P78357 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.82□□□□□ -2.7
CNTNAP1P78357 RNU6-109P-201ENST00000516364 107 ntBASIC-1.82□□□□□ -2.7
CNTNAP1P78357 RNU6-184P-201ENST00000516514 107 ntBASIC-1.82□□□□□ -2.7
CNTNAP1P78357 RNU6-794P-201ENST00000517261 64 ntBASIC-1.82□□□□□ -2.7
CNTNAP1P78357 MIR4490-201ENST00000582647 84 ntBASIC-1.82□□□□□ -2.7
CNTNAP1P78357 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.83□□□□□ -2.7
CNTNAP1P78357 RNU6-246P-201ENST00000384702 107 ntBASIC-1.83□□□□□ -2.7
CNTNAP1P78357 SNORD115-37-201ENST00000363768 82 ntBASIC-1.84□□□□□ -2.7
CNTNAP1P78357 U7.5-201ENST00000517224 61 ntBASIC-1.84□□□□□ -2.7
CNTNAP1P78357 MIR5683-201ENST00000636514 76 ntBASIC-1.84□□□□□ -2.7
CNTNAP1P78357 RNU6-230P-201ENST00000362457 104 ntBASIC-1.85□□□□□ -2.7
CNTNAP1P78357 RNU6-633P-201ENST00000362612 103 ntBASIC-1.85□□□□□ -2.71
CNTNAP1P78357 MIR548AG1-201ENST00000579932 66 ntBASIC-1.85□□□□□ -2.71
CNTNAP1P78357 RNU6-645P-201ENST00000364649 106 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 SNORD19-201ENST00000391191 68 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 RNU7-88P-201ENST00000458752 63 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 RNU6-766P-201ENST00000362478 107 ntBASIC-1.87□□□□□ -2.71
CNTNAP1P78357 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.87□□□□□ -2.71
CNTNAP1P78357 AC008267.6-201ENST00000441664 139 ntBASIC-1.87□□□□□ -2.71
CNTNAP1P78357 AC090425.1-201ENST00000610007 140 ntBASIC-1.87□□□□□ -2.71
CNTNAP1P78357 RNU6-624P-201ENST00000363411 107 ntBASIC-1.88□□□□□ -2.71
CNTNAP1P78357 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.88□□□□□ -2.71
CNTNAP1P78357 RNU6-774P-201ENST00000363238 107 ntBASIC-1.89□□□□□ -2.71
CNTNAP1P78357 MIR2052-201ENST00000636055 55 ntBASIC-1.89□□□□□ -2.71
CNTNAP1P78357 SNORA19-201ENST00000384737 128 ntBASIC-1.9□□□□□ -2.71
CNTNAP1P78357 RNU6-803P-201ENST00000516034 102 ntBASIC-1.9□□□□□ -2.71
CNTNAP1P78357 AP002795.1-201ENST00000534879 84 ntBASIC-1.9□□□□□ -2.71
CNTNAP1P78357 RNU6-959P-201ENST00000384671 107 ntBASIC-1.91□□□□□ -2.72
CNTNAP1P78357 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.91□□□□□ -2.72
CNTNAP1P78357 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.91□□□□□ -2.72
CNTNAP1P78357 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.92□□□□□ -2.72
CNTNAP1P78357 AC093729.1-201ENST00000513074 128 ntBASIC-1.92□□□□□ -2.72
CNTNAP1P78357 MIR4668-201ENST00000582284 70 ntBASIC-1.92□□□□□ -2.72
CNTNAP1P78357 MIR548C-201ENST00000384815 97 ntBASIC-1.93□□□□□ -2.72
CNTNAP1P78357 RNU6-557P-201ENST00000516842 110 ntBASIC-1.93□□□□□ -2.72
CNTNAP1P78357 MIR3133-201ENST00000583157 78 ntBASIC-1.93□□□□□ -2.72
CNTNAP1P78357 RNU6-834P-201ENST00000362367 110 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 RNU6-478P-201ENST00000363904 110 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 RNU6-400P-201ENST00000391173 106 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 RNU6-168P-201ENST00000516189 101 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 RNU6-303P-201ENST00000517091 106 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.94□□□□□ -2.72
CNTNAP1P78357 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.95□□□□□ -2.72
CNTNAP1P78357 RNU4-88P-201ENST00000411220 86 ntBASIC-1.95□□□□□ -2.72
CNTNAP1P78357 RNU7-174P-201ENST00000516248 59 ntBASIC-1.95□□□□□ -2.72
CNTNAP1P78357 RNU6-589P-201ENST00000516485 107 ntBASIC-1.95□□□□□ -2.72
CNTNAP1P78357 MIR3675-201ENST00000583661 73 ntBASIC-1.95□□□□□ -2.72
CNTNAP1P78357 MIR429-201ENST00000362106 83 ntBASIC-1.96□□□□□ -2.72
CNTNAP1P78357 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.96□□□□□ -2.72
CNTNAP1P78357 RNU6-458P-201ENST00000384179 107 ntBASIC-1.96□□□□□ -2.72
CNTNAP1P78357 U6.58-201ENST00000613107 107 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 234.6 ms