Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.06□□□□□ -2.74
RPL28P46779 SNORA40-201ENST00000388090 126 ntBASIC-2.06□□□□□ -2.74
RPL28P46779 RNU6-258P-201ENST00000390884 101 ntBASIC-2.06□□□□□ -2.74
RPL28P46779 RNU6-257P-201ENST00000410238 98 ntBASIC-2.06□□□□□ -2.74
RPL28P46779 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.06□□□□□ -2.74
RPL28P46779 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.06□□□□□ -2.74
RPL28P46779 RNU6-162P-201ENST00000516228 103 ntBASIC-2.06□□□□□ -2.74
RPL28P46779 RNU6-624P-201ENST00000363411 107 ntBASIC-2.07□□□□□ -2.74
RPL28P46779 MIR3675-201ENST00000583661 73 ntBASIC-2.07□□□□□ -2.74
RPL28P46779 MIR548V-201ENST00000584165 80 ntBASIC-2.07□□□□□ -2.74
RPL28P46779 U7.3-201ENST00000616123 62 ntBASIC-2.07□□□□□ -2.74
RPL28P46779 U6.95-201ENST00000636931 70 ntBASIC-2.07□□□□□ -2.74
RPL28P46779 RNU6-797P-201ENST00000363101 109 ntBASIC-2.08□□□□□ -2.74
RPL28P46779 RNU6-867P-201ENST00000364956 107 ntBASIC-2.08□□□□□ -2.74
RPL28P46779 MIR548AA1-201ENST00000384971 97 ntBASIC-2.08□□□□□ -2.74
RPL28P46779 MIR590-201ENST00000385008 97 ntBASIC-2.08□□□□□ -2.74
RPL28P46779 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.09□□□□□ -2.74
RPL28P46779 RNU6-604P-201ENST00000390917 100 ntBASIC-2.09□□□□□ -2.74
RPL28P46779 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.09□□□□□ -2.74
RPL28P46779 MIR4503-201ENST00000582187 83 ntBASIC-2.09□□□□□ -2.74
RPL28P46779 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.09□□□□□ -2.74
RPL28P46779 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.09□□□□□ -2.74
RPL28P46779 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.09□□□□□ -2.74
RPL28P46779 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.09□□□□□ -2.74
RPL28P46779 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.09□□□□□ -2.74
RPL28P46779 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.09□□□□□ -2.74
RPL28P46779 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.1□□□□□ -2.75
RPL28P46779 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.1□□□□□ -2.75
RPL28P46779 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.11□□□□□ -2.75
RPL28P46779 RNU6-880P-201ENST00000384526 107 ntBASIC-2.11□□□□□ -2.75
RPL28P46779 SNORD116-16-201ENST00000384533 92 ntBASIC-2.11□□□□□ -2.75
RPL28P46779 MTATP8P2-201ENST00000435212 202 ntBASIC-2.11□□□□□ -2.75
RPL28P46779 RNU6-971P-201ENST00000516920 106 ntBASIC-2.11□□□□□ -2.75
RPL28P46779 RNU6-980P-201ENST00000516925 103 ntBASIC-2.11□□□□□ -2.75
RPL28P46779 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.12□□□□□ -2.75
RPL28P46779 SNORA8.1-201ENST00000384250 140 ntBASIC-2.12□□□□□ -2.75
RPL28P46779 SNORD113-2-201ENST00000391082 72 ntBASIC-2.12□□□□□ -2.75
RPL28P46779 RNU4-88P-201ENST00000411220 86 ntBASIC-2.12□□□□□ -2.75
RPL28P46779 RNU6-659P-201ENST00000516454 104 ntBASIC-2.12□□□□□ -2.75
RPL28P46779 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.12□□□□□ -2.75
RPL28P46779 RNU6-303P-201ENST00000517091 106 ntBASIC-2.12□□□□□ -2.75
RPL28P46779 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.13□□□□□ -2.75
RPL28P46779 MIR630-201ENST00000384957 97 ntBASIC-2.13□□□□□ -2.75
RPL28P46779 AC074348.1-201ENST00000426503 132 ntBASIC-2.13□□□□□ -2.75
RPL28P46779 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.13□□□□□ -2.75
RPL28P46779 RNU6-766P-201ENST00000362478 107 ntBASIC-2.14□□□□□ -2.75
RPL28P46779 RNU6-633P-201ENST00000362612 103 ntBASIC-2.14□□□□□ -2.75
RPL28P46779 RNU6-247P-201ENST00000362636 107 ntBASIC-2.14□□□□□ -2.75
RPL28P46779 SNORD45.1-201ENST00000363181 77 ntBASIC-2.14□□□□□ -2.75
RPL28P46779 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.14□□□□□ -2.75
RPL28P46779 AC013734.1-201ENST00000619329 111 ntBASIC-2.14□□□□□ -2.75
RPL28P46779 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.14□□□□□ -2.75
RPL28P46779 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.14□□□□□ -2.75
RPL28P46779 SNORD115-37-201ENST00000363768 82 ntBASIC-2.15□□□□□ -2.75
RPL28P46779 SNORD116-21-201ENST00000384507 92 ntBASIC-2.15□□□□□ -2.75
RPL28P46779 RNU6-109P-201ENST00000516364 107 ntBASIC-2.15□□□□□ -2.75
RPL28P46779 RNU6-184P-201ENST00000516514 107 ntBASIC-2.15□□□□□ -2.75
RPL28P46779 RNU6-557P-201ENST00000516842 110 ntBASIC-2.15□□□□□ -2.75
RPL28P46779 RNU6-182P-201ENST00000516970 105 ntBASIC-2.15□□□□□ -2.75
RPL28P46779 AC005520.4-201ENST00000604337 90 ntBASIC-2.15□□□□□ -2.75
RPL28P46779 AL353621.2-201ENST00000605340 133 ntBASIC-2.15□□□□□ -2.75
RPL28P46779 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.15□□□□□ -2.75
RPL28P46779 SNORD1B-201ENST00000363091 84 ntBASIC-2.16□□□□□ -2.76
RPL28P46779 SNORA63-201ENST00000363450 132 ntBASIC-2.16□□□□□ -2.76
RPL28P46779 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.16□□□□□ -2.76
RPL28P46779 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.16□□□□□ -2.76
RPL28P46779 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.16□□□□□ -2.76
RPL28P46779 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.16□□□□□ -2.76
RPL28P46779 SNORA41B-201ENST00000384785 128 ntBASIC-2.17□□□□□ -2.76
RPL28P46779 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.17□□□□□ -2.76
RPL28P46779 AC093729.1-201ENST00000513074 128 ntBASIC-2.17□□□□□ -2.76
RPL28P46779 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.17□□□□□ -2.76
RPL28P46779 SNORA27.2-201ENST00000363365 126 ntBASIC-2.18□□□□□ -2.76
RPL28P46779 RNA5SP215-201ENST00000363440 122 ntBASIC-2.18□□□□□ -2.76
RPL28P46779 RNU6-379P-201ENST00000363813 104 ntBASIC-2.18□□□□□ -2.76
RPL28P46779 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.18□□□□□ -2.76
RPL28P46779 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.18□□□□□ -2.76
RPL28P46779 RNU6-119P-201ENST00000364882 107 ntBASIC-2.18□□□□□ -2.76
RPL28P46779 MIR1302-5-201ENST00000408164 150 ntBASIC-2.18□□□□□ -2.76
RPL28P46779 RNU7-200P-201ENST00000516105 62 ntBASIC-2.18□□□□□ -2.76
RPL28P46779 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.19□□□□□ -2.76
RPL28P46779 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.19□□□□□ -2.76
RPL28P46779 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.19□□□□□ -2.76
RPL28P46779 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.19□□□□□ -2.76
RPL28P46779 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.19□□□□□ -2.76
RPL28P46779 RNU6-196P-201ENST00000384315 107 ntBASIC-2.2□□□□□ -2.76
RPL28P46779 MTND4LP1-201ENST00000446263 157 ntBASIC-2.2□□□□□ -2.76
RPL28P46779 RNU7-151P-201ENST00000516930 53 ntBASIC-2.2□□□□□ -2.76
RPL28P46779 MIR548W-201ENST00000581970 74 ntBASIC-2.2□□□□□ -2.76
RPL28P46779 MIR4668-201ENST00000582284 70 ntBASIC-2.2□□□□□ -2.76
RPL28P46779 RNA5SP405-201ENST00000363059 114 ntBASIC-2.21□□□□□ -2.76
RPL28P46779 RNU6-686P-201ENST00000364839 107 ntBASIC-2.21□□□□□ -2.76
RPL28P46779 SNORD115-31-201ENST00000365318 82 ntBASIC-2.21□□□□□ -2.76
RPL28P46779 RNU6-669P-201ENST00000365575 107 ntBASIC-2.21□□□□□ -2.76
RPL28P46779 RNU6-886P-201ENST00000384319 105 ntBASIC-2.21□□□□□ -2.76
RPL28P46779 RNU6-327P-201ENST00000516270 127 ntBASIC-2.21□□□□□ -2.76
RPL28P46779 RNU6-388P-201ENST00000517012 105 ntBASIC-2.21□□□□□ -2.76
RPL28P46779 RNU6-389P-201ENST00000517048 105 ntBASIC-2.21□□□□□ -2.76
RPL28P46779 U6.97-201ENST00000636904 101 ntBASIC-2.21□□□□□ -2.76
RPL28P46779 RNU6-995P-201ENST00000391244 107 ntBASIC-2.22□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms