Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 RNU6-633P-201ENST00000362612 103 ntBASIC-1.52□□□□□ -2.65
BRCA1P38398 RNU6-554P-201ENST00000410466 106 ntBASIC-1.52□□□□□ -2.65
BRCA1P38398 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.53□□□□□ -2.65
BRCA1P38398 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.53□□□□□ -2.65
BRCA1P38398 U4.4-201ENST00000620626 117 ntBASIC-1.53□□□□□ -2.65
BRCA1P38398 RNY4P27-201ENST00000363341 96 ntBASIC-1.54□□□□□ -2.66
BRCA1P38398 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.54□□□□□ -2.66
BRCA1P38398 AC006160.2-201ENST00000637708 154 ntBASIC-1.54□□□□□ -2.66
BRCA1P38398 SNORD116-14-201ENST00000383894 92 ntBASIC-1.54□□□□□ -2.66
BRCA1P38398 SNORD116-17-201ENST00000383929 92 ntBASIC-1.54□□□□□ -2.66
BRCA1P38398 SNORD116-15-201ENST00000384445 92 ntBASIC-1.54□□□□□ -2.66
BRCA1P38398 SNORD116-19-201ENST00000384729 92 ntBASIC-1.54□□□□□ -2.66
BRCA1P38398 MIR1302-5-201ENST00000408164 150 ntBASIC-1.54□□□□□ -2.66
BRCA1P38398 RNU6-807P-201ENST00000516805 107 ntBASIC-1.54□□□□□ -2.66
BRCA1P38398 AC099654.10-201ENST00000640395 161 ntBASIC-1.54□□□□□ -2.66
BRCA1P38398 RNU6-698P-201ENST00000363523 107 ntBASIC-1.55□□□□□ -2.66
BRCA1P38398 RNU6-226P-201ENST00000363778 107 ntBASIC-1.55□□□□□ -2.66
BRCA1P38398 RNU6-34P-201ENST00000364874 107 ntBASIC-1.55□□□□□ -2.66
BRCA1P38398 MIR548AG1-201ENST00000579932 66 ntBASIC-1.55□□□□□ -2.66
BRCA1P38398 RNA5SP215-201ENST00000363440 122 ntBASIC-1.56□□□□□ -2.66
BRCA1P38398 MIR630-201ENST00000384957 97 ntBASIC-1.56□□□□□ -2.66
BRCA1P38398 AC090616.4-201ENST00000448026 115 ntBASIC-1.56□□□□□ -2.66
BRCA1P38398 RNU6-255P-201ENST00000516957 105 ntBASIC-1.56□□□□□ -2.66
BRCA1P38398 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.56□□□□□ -2.66
BRCA1P38398 AC091912.2-201ENST00000624798 167 ntBASIC-1.56□□□□□ -2.66
BRCA1P38398 RNU6-458P-201ENST00000384179 107 ntBASIC-1.56□□□□□ -2.66
BRCA1P38398 U6.58-201ENST00000613107 107 ntBASIC-1.56□□□□□ -2.66
BRCA1P38398 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.57□□□□□ -2.66
BRCA1P38398 AC008267.6-201ENST00000441664 139 ntBASIC-1.58□□□□□ -2.66
BRCA1P38398 RNU6-303P-201ENST00000517091 106 ntBASIC-1.58□□□□□ -2.66
BRCA1P38398 MIR429-201ENST00000362106 83 ntBASIC-1.58□□□□□ -2.66
BRCA1P38398 RNU6-645P-201ENST00000364649 106 ntBASIC-1.58□□□□□ -2.66
BRCA1P38398 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.58□□□□□ -2.66
BRCA1P38398 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.58□□□□□ -2.66
BRCA1P38398 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.58□□□□□ -2.66
BRCA1P38398 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.59□□□□□ -2.66
BRCA1P38398 RNU6-119P-201ENST00000364882 107 ntBASIC-1.59□□□□□ -2.66
BRCA1P38398 RNU6-630P-201ENST00000391258 106 ntBASIC-1.59□□□□□ -2.66
BRCA1P38398 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.59□□□□□ -2.66
BRCA1P38398 RNU6-732P-201ENST00000516033 103 ntBASIC-1.59□□□□□ -2.66
BRCA1P38398 RNU6-982P-201ENST00000516216 102 ntBASIC-1.59□□□□□ -2.66
BRCA1P38398 RNU6-79P-201ENST00000362511 107 ntBASIC-1.6□□□□□ -2.67
BRCA1P38398 RNU6-478P-201ENST00000363904 110 ntBASIC-1.6□□□□□ -2.67
BRCA1P38398 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.6□□□□□ -2.67
BRCA1P38398 RNU6-109P-201ENST00000516364 107 ntBASIC-1.6□□□□□ -2.67
BRCA1P38398 RNU6-184P-201ENST00000516514 107 ntBASIC-1.6□□□□□ -2.67
BRCA1P38398 AC090425.1-201ENST00000610007 140 ntBASIC-1.6□□□□□ -2.67
BRCA1P38398 AP001318.4-201ENST00000616637 121 ntBASIC-1.6□□□□□ -2.67
BRCA1P38398 RNU6-168P-201ENST00000516189 101 ntBASIC-1.6□□□□□ -2.67
BRCA1P38398 SNORA40.13-201ENST00000516379 120 ntBASIC-1.6□□□□□ -2.67
BRCA1P38398 MIR8053-201ENST00000613344 75 ntBASIC-1.6□□□□□ -2.67
BRCA1P38398 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.61□□□□□ -2.67
BRCA1P38398 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.61□□□□□ -2.67
BRCA1P38398 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.61□□□□□ -2.67
BRCA1P38398 MIR6502-201ENST00000617296 76 ntBASIC-1.61□□□□□ -2.67
BRCA1P38398 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.62□□□□□ -2.67
BRCA1P38398 RNU6-587P-201ENST00000391282 106 ntBASIC-1.62□□□□□ -2.67
BRCA1P38398 SNORD113-2-201ENST00000391082 72 ntBASIC-1.63□□□□□ -2.67
BRCA1P38398 RPL35AP4-201ENST00000412007 102 ntBASIC-1.63□□□□□ -2.67
BRCA1P38398 RNU6-589P-201ENST00000516485 107 ntBASIC-1.63□□□□□ -2.67
BRCA1P38398 MIR548V-201ENST00000584165 80 ntBASIC-1.63□□□□□ -2.67
BRCA1P38398 RNU6-766P-201ENST00000362478 107 ntBASIC-1.63□□□□□ -2.67
BRCA1P38398 SNORD45.1-201ENST00000363181 77 ntBASIC-1.63□□□□□ -2.67
BRCA1P38398 SNORA8.1-201ENST00000384250 140 ntBASIC-1.63□□□□□ -2.67
BRCA1P38398 MIR4668-201ENST00000582284 70 ntBASIC-1.63□□□□□ -2.67
BRCA1P38398 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.64□□□□□ -2.67
BRCA1P38398 RNU6-695P-201ENST00000391157 104 ntBASIC-1.64□□□□□ -2.67
BRCA1P38398 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.64□□□□□ -2.67
BRCA1P38398 MTND4LP1-201ENST00000446263 157 ntBASIC-1.64□□□□□ -2.67
BRCA1P38398 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.64□□□□□ -2.67
BRCA1P38398 RNU6-209P-201ENST00000384118 107 ntBASIC-1.65□□□□□ -2.67
BRCA1P38398 RNU6-22P-201ENST00000384355 107 ntBASIC-1.65□□□□□ -2.67
BRCA1P38398 MIR548AA1-201ENST00000384971 97 ntBASIC-1.65□□□□□ -2.67
BRCA1P38398 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.65□□□□□ -2.67
BRCA1P38398 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.65□□□□□ -2.67
BRCA1P38398 AC093729.1-201ENST00000513074 128 ntBASIC-1.65□□□□□ -2.67
BRCA1P38398 RNU6-267P-201ENST00000516714 103 ntBASIC-1.65□□□□□ -2.67
BRCA1P38398 SNORD113.1-201ENST00000363280 73 ntBASIC-1.66□□□□□ -2.68
BRCA1P38398 RNY4P18-201ENST00000391107 89 ntBASIC-1.66□□□□□ -2.68
BRCA1P38398 MIR23C-201ENST00000579846 100 ntBASIC-1.67□□□□□ -2.68
BRCA1P38398 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.67□□□□□ -2.68
BRCA1P38398 RNU6-755P-201ENST00000364400 103 ntBASIC-1.67□□□□□ -2.68
BRCA1P38398 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.67□□□□□ -2.68
BRCA1P38398 AC120024.2-201ENST00000576526 175 ntBASIC-1.67□□□□□ -2.68
BRCA1P38398 MIR6874-201ENST00000635894 71 ntBASIC-1.67□□□□□ -2.68
BRCA1P38398 AC074348.1-201ENST00000426503 132 ntBASIC-1.68□□□□□ -2.68
BRCA1P38398 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.69□□□□□ -2.68
BRCA1P38398 MIR450A1-201ENST00000362262 91 ntBASIC-1.7□□□□□ -2.68
BRCA1P38398 MIR548C-201ENST00000384815 97 ntBASIC-1.7□□□□□ -2.68
BRCA1P38398 AL031737.1-201ENST00000450125 223 ntBASIC-1.71□□□□□ -2.68
BRCA1P38398 RNU6-557P-201ENST00000516842 110 ntBASIC-1.71□□□□□ -2.68
BRCA1P38398 RNU7-151P-201ENST00000516930 53 ntBASIC-1.71□□□□□ -2.68
BRCA1P38398 MIR548M-201ENST00000408260 86 ntBASIC-1.71□□□□□ -2.68
BRCA1P38398 MIR3133-201ENST00000583157 78 ntBASIC-1.71□□□□□ -2.68
BRCA1P38398 U2.18-201ENST00000622185 84 ntBASIC-1.71□□□□□ -2.68
BRCA1P38398 RNU6-330P-201ENST00000363015 107 ntBASIC-1.72□□□□□ -2.68
BRCA1P38398 RNU6-400P-201ENST00000391173 106 ntBASIC-1.72□□□□□ -2.68
BRCA1P38398 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.72□□□□□ -2.68
BRCA1P38398 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.72□□□□□ -2.68
BRCA1P38398 snosnR66.1-201ENST00000391095 99 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms