Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU4-63P-201ENST00000411313 118 ntBASIC-0.16□□□□□ -2.44
COL5A1P20908 AC114755.3-201ENST00000481111 251 ntBASIC-0.16□□□□□ -2.44
COL5A1P20908 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.16□□□□□ -2.44
COL5A1P20908 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.16□□□□□ -2.44
COL5A1P20908 MIR4712-201ENST00000583750 82 ntBASIC-0.16□□□□□ -2.44
COL5A1P20908 AL590491.3-201ENST00000610731 82 ntBASIC-0.16□□□□□ -2.44
COL5A1P20908 MIR8068-201ENST00000618032 68 ntBASIC-0.16□□□□□ -2.44
COL5A1P20908 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 RNU6-881P-201ENST00000516813 102 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 uc_338.36-201ENST00000622331 158 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 SNORD45.1-201ENST00000363181 77 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 RNU6-587P-201ENST00000391282 106 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 MTND4LP1-201ENST00000446263 157 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 RNU6-982P-201ENST00000516216 102 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 MIR6851-201ENST00000617060 67 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 U6.96-201ENST00000636425 70 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 MIR4788-201ENST00000639104 80 ntBASIC-0.17□□□□□ -2.44
COL5A1P20908 RNU6-573P-201ENST00000383938 106 ntBASIC-0.18□□□□□ -2.44
COL5A1P20908 SNORD18.2-201ENST00000459604 70 ntBASIC-0.18□□□□□ -2.44
COL5A1P20908 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.18□□□□□ -2.44
COL5A1P20908 RNU6-542P-201ENST00000516405 103 ntBASIC-0.19□□□□□ -2.44
COL5A1P20908 RNU6-973P-201ENST00000364690 107 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 MIR601-201ENST00000385256 79 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 SNORD126-201ENST00000459475 77 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 RNU6-857P-201ENST00000515893 110 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 RNA5SP66-201ENST00000517178 101 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 U4.4-201ENST00000620626 117 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 MIR198-201ENST00000637333 62 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 RNU6-330P-201ENST00000363015 107 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 RNU6-242P-201ENST00000384359 107 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 SNORA13-201ENST00000458790 133 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 RNU7-174P-201ENST00000516248 59 ntBASIC-0.2□□□□□ -2.44
COL5A1P20908 RNU6-698P-201ENST00000363523 107 ntBASIC-0.21□□□□□ -2.44
COL5A1P20908 RNU6-34P-201ENST00000364874 107 ntBASIC-0.21□□□□□ -2.44
COL5A1P20908 SNORD45A-201ENST00000384512 84 ntBASIC-0.21□□□□□ -2.44
COL5A1P20908 MIR630-201ENST00000384957 97 ntBASIC-0.21□□□□□ -2.44
COL5A1P20908 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.21□□□□□ -2.44
COL5A1P20908 SNORD22.1-201ENST00000516331 125 ntBASIC-0.21□□□□□ -2.44
COL5A1P20908 MIR8064-201ENST00000612863 90 ntBASIC-0.21□□□□□ -2.44
COL5A1P20908 AL445584.3-201ENST00000617173 78 ntBASIC-0.21□□□□□ -2.44
COL5A1P20908 SNORA62.4-201ENST00000365504 151 ntBASIC-0.22□□□□□ -2.44
COL5A1P20908 SNORD78.1-201ENST00000390866 65 ntBASIC-0.22□□□□□ -2.44
COL5A1P20908 RNA5SP275-201ENST00000363936 118 ntBASIC-0.22□□□□□ -2.45
COL5A1P20908 SNORD74.6-201ENST00000364796 70 ntBASIC-0.22□□□□□ -2.45
COL5A1P20908 MIR518B-201ENST00000385127 83 ntBASIC-0.22□□□□□ -2.45
COL5A1P20908 SNORD75.1-201ENST00000408373 60 ntBASIC-0.22□□□□□ -2.45
COL5A1P20908 AL021921.1-201ENST00000442774 93 ntBASIC-0.22□□□□□ -2.45
COL5A1P20908 RNA5SP470-201ENST00000516463 106 ntBASIC-0.22□□□□□ -2.45
COL5A1P20908 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.22□□□□□ -2.45
COL5A1P20908 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.22□□□□□ -2.45
COL5A1P20908 U7.5-201ENST00000517224 61 ntBASIC-0.22□□□□□ -2.45
COL5A1P20908 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.22□□□□□ -2.45
COL5A1P20908 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.22□□□□□ -2.45
COL5A1P20908 RNU6-645P-201ENST00000364649 106 ntBASIC-0.23□□□□□ -2.45
COL5A1P20908 SNORD38.3-201ENST00000516599 73 ntBASIC-0.23□□□□□ -2.45
COL5A1P20908 AL353803.5-201ENST00000599815 141 ntBASIC-0.23□□□□□ -2.45
COL5A1P20908 SNORD114-14-201ENST00000362723 75 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 MIR3179-1-201ENST00000578940 84 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 MIR3179-2-201ENST00000579107 84 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 MIR3179-3-201ENST00000579566 84 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 MIR3179-4-201ENST00000617599 84 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 U2.7-201ENST00000619197 100 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 MIR204-201ENST00000385200 110 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 RNU6-663P-201ENST00000391105 106 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 SNORA72.7-201ENST00000516349 94 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 MIR5704-201ENST00000584029 77 ntBASIC-0.24□□□□□ -2.45
COL5A1P20908 RNU6-924P-201ENST00000362926 108 ntBASIC-0.25□□□□□ -2.45
COL5A1P20908 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.25□□□□□ -2.45
COL5A1P20908 AP000533.3-201ENST00000447704 118 ntBASIC-0.25□□□□□ -2.45
COL5A1P20908 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.25□□□□□ -2.45
COL5A1P20908 MIR3134-201ENST00000579433 74 ntBASIC-0.25□□□□□ -2.45
COL5A1P20908 MIR548V-201ENST00000584165 80 ntBASIC-0.25□□□□□ -2.45
COL5A1P20908 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.25□□□□□ -2.45
COL5A1P20908 MIR6888-201ENST00000621977 67 ntBASIC-0.25□□□□□ -2.45
COL5A1P20908 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.26□□□□□ -2.45
COL5A1P20908 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
COL5A1P20908 MIR4436A-201ENST00000585278 85 ntBASIC-0.26□□□□□ -2.45
COL5A1P20908 MIR548AZ-201ENST00000616567 95 ntBASIC-0.26□□□□□ -2.45
COL5A1P20908 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.27□□□□□ -2.45
COL5A1P20908 RNU6-411P-201ENST00000384451 107 ntBASIC-0.27□□□□□ -2.45
COL5A1P20908 MIR124-2-201ENST00000385081 109 ntBASIC-0.27□□□□□ -2.45
COL5A1P20908 MIR196A2-201ENST00000385189 110 ntBASIC-0.27□□□□□ -2.45
COL5A1P20908 SNORD113-2-201ENST00000391082 72 ntBASIC-0.27□□□□□ -2.45
COL5A1P20908 MIR4484-201ENST00000582855 83 ntBASIC-0.27□□□□□ -2.45
COL5A1P20908 SNORA25.5-201ENST00000363782 126 ntBASIC-0.27□□□□□ -2.45
COL5A1P20908 SNORD115-31-201ENST00000365318 82 ntBASIC-0.27□□□□□ -2.45
COL5A1P20908 RNU6-604P-201ENST00000390917 100 ntBASIC-0.27□□□□□ -2.45
COL5A1P20908 AL445193.1-201ENST00000441183 141 ntBASIC-0.27□□□□□ -2.45
COL5A1P20908 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.28□□□□□ -2.45
COL5A1P20908 RNA5SP225-201ENST00000410874 135 ntBASIC-0.28□□□□□ -2.45
COL5A1P20908 RNU6-634P-201ENST00000459134 106 ntBASIC-0.28□□□□□ -2.45
COL5A1P20908 AC021146.6-201ENST00000514659 117 ntBASIC-0.28□□□□□ -2.45
COL5A1P20908 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.28□□□□□ -2.45
COL5A1P20908 MIR4464-201ENST00000580818 92 ntBASIC-0.28□□□□□ -2.45
COL5A1P20908 MIR4662A-201ENST00000637499 67 ntBASIC-0.28□□□□□ -2.45
COL5A1P20908 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms