Protein–RNA interactions for Protein: P0CW19

LIMS3, LIM and senescent cell antigen-like-containing domain protein 3, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3P0CW19 MIR4503-201ENST00000582187 83 ntBASIC-2.76□□□□□ -2.85
LIMS3P0CW19 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.77□□□□□ -2.85
LIMS3P0CW19 RNU6-574P-201ENST00000384265 107 ntBASIC-2.77□□□□□ -2.85
LIMS3P0CW19 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.77□□□□□ -2.85
LIMS3P0CW19 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.78□□□□□ -2.85
LIMS3P0CW19 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.78□□□□□ -2.85
LIMS3P0CW19 RNU7-61P-201ENST00000515897 61 ntBASIC-2.78□□□□□ -2.85
LIMS3P0CW19 MIR3139-201ENST00000579145 76 ntBASIC-2.78□□□□□ -2.85
LIMS3P0CW19 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.79□□□□□ -2.86
LIMS3P0CW19 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.79□□□□□ -2.86
LIMS3P0CW19 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.79□□□□□ -2.86
LIMS3P0CW19 RNU4-88P-201ENST00000411220 86 ntBASIC-2.79□□□□□ -2.86
LIMS3P0CW19 RNU6-196P-201ENST00000384315 107 ntBASIC-2.8□□□□□ -2.86
LIMS3P0CW19 MIR519C-201ENST00000385053 87 ntBASIC-2.8□□□□□ -2.86
LIMS3P0CW19 MTND5P41-201ENST00000517498 206 ntBASIC-2.8□□□□□ -2.86
LIMS3P0CW19 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.81□□□□□ -2.86
LIMS3P0CW19 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.81□□□□□ -2.86
LIMS3P0CW19 RNU6-194P-201ENST00000363862 105 ntBASIC-2.82□□□□□ -2.86
LIMS3P0CW19 MIR520D-201ENST00000385002 87 ntBASIC-2.82□□□□□ -2.86
LIMS3P0CW19 RNU6-587P-201ENST00000391282 106 ntBASIC-2.82□□□□□ -2.86
LIMS3P0CW19 RNU6-257P-201ENST00000410238 98 ntBASIC-2.82□□□□□ -2.86
LIMS3P0CW19 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.82□□□□□ -2.86
LIMS3P0CW19 AL353621.2-201ENST00000605340 133 ntBASIC-2.82□□□□□ -2.86
LIMS3P0CW19 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.83□□□□□ -2.86
LIMS3P0CW19 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.83□□□□□ -2.86
LIMS3P0CW19 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.83□□□□□ -2.86
LIMS3P0CW19 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.83□□□□□ -2.86
LIMS3P0CW19 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.83□□□□□ -2.86
LIMS3P0CW19 RNU6-327P-201ENST00000516270 127 ntBASIC-2.84□□□□□ -2.86
LIMS3P0CW19 RNU6-598P-201ENST00000364017 105 ntBASIC-2.85□□□□□ -2.87
LIMS3P0CW19 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.86□□□□□ -2.87
LIMS3P0CW19 RNU6-698P-201ENST00000363523 107 ntBASIC-2.86□□□□□ -2.87
LIMS3P0CW19 SNORD115-37-201ENST00000363768 82 ntBASIC-2.86□□□□□ -2.87
LIMS3P0CW19 RNU6-34P-201ENST00000364874 107 ntBASIC-2.86□□□□□ -2.87
LIMS3P0CW19 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.86□□□□□ -2.87
LIMS3P0CW19 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.86□□□□□ -2.87
LIMS3P0CW19 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.86□□□□□ -2.87
LIMS3P0CW19 MT-TM-201ENST00000387377 68 ntBASIC-2.87□□□□□ -2.87
LIMS3P0CW19 RNU6-162P-201ENST00000516228 103 ntBASIC-2.87□□□□□ -2.87
LIMS3P0CW19 RNU6-971P-201ENST00000516920 106 ntBASIC-2.87□□□□□ -2.87
LIMS3P0CW19 MIR3675-201ENST00000583661 73 ntBASIC-2.87□□□□□ -2.87
LIMS3P0CW19 U7.3-201ENST00000616123 62 ntBASIC-2.87□□□□□ -2.87
LIMS3P0CW19 AL117351.2-201ENST00000513571 157 ntBASIC-2.88□□□□□ -2.87
LIMS3P0CW19 AC120024.2-201ENST00000576526 175 ntBASIC-2.88□□□□□ -2.87
LIMS3P0CW19 RNU6-379P-201ENST00000363813 104 ntBASIC-2.89□□□□□ -2.87
LIMS3P0CW19 RNU6-563P-201ENST00000364872 108 ntBASIC-2.89□□□□□ -2.87
LIMS3P0CW19 MIR590-201ENST00000385008 97 ntBASIC-2.89□□□□□ -2.87
LIMS3P0CW19 MIR1302-5-201ENST00000408164 150 ntBASIC-2.89□□□□□ -2.87
LIMS3P0CW19 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.89□□□□□ -2.87
LIMS3P0CW19 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.9□□□□□ -2.87
LIMS3P0CW19 SNORD116-21-201ENST00000384507 92 ntBASIC-2.9□□□□□ -2.87
LIMS3P0CW19 RNU6-258P-201ENST00000390884 101 ntBASIC-2.9□□□□□ -2.87
LIMS3P0CW19 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.9□□□□□ -2.87
LIMS3P0CW19 RNU6-659P-201ENST00000516454 104 ntBASIC-2.91□□□□□ -2.88
LIMS3P0CW19 AP001094.1-201ENST00000579805 193 ntBASIC-2.91□□□□□ -2.88
LIMS3P0CW19 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.92□□□□□ -2.88
LIMS3P0CW19 U2.18-201ENST00000622185 84 ntBASIC-2.92□□□□□ -2.88
LIMS3P0CW19 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.93□□□□□ -2.88
LIMS3P0CW19 MTATP8P2-201ENST00000435212 202 ntBASIC-2.93□□□□□ -2.88
LIMS3P0CW19 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.93□□□□□ -2.88
LIMS3P0CW19 RNU6-182P-201ENST00000516970 105 ntBASIC-2.93□□□□□ -2.88
LIMS3P0CW19 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.93□□□□□ -2.88
LIMS3P0CW19 U4.4-201ENST00000620626 117 ntBASIC-2.93□□□□□ -2.88
LIMS3P0CW19 RNA5SP93-201ENST00000362525 114 ntBASIC-2.94□□□□□ -2.88
LIMS3P0CW19 MIR548AA1-201ENST00000384971 97 ntBASIC-2.94□□□□□ -2.88
LIMS3P0CW19 RNU6-604P-201ENST00000390917 100 ntBASIC-2.94□□□□□ -2.88
LIMS3P0CW19 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.94□□□□□ -2.88
LIMS3P0CW19 RNU6-388P-201ENST00000517012 105 ntBASIC-2.94□□□□□ -2.88
LIMS3P0CW19 RNU6-389P-201ENST00000517048 105 ntBASIC-2.94□□□□□ -2.88
LIMS3P0CW19 RNU6-303P-201ENST00000517091 106 ntBASIC-2.94□□□□□ -2.88
LIMS3P0CW19 MIR3170-201ENST00000582699 77 ntBASIC-2.94□□□□□ -2.88
LIMS3P0CW19 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.94□□□□□ -2.88
LIMS3P0CW19 RNU6-624P-201ENST00000363411 107 ntBASIC-2.95□□□□□ -2.88
LIMS3P0CW19 SNORA8.1-201ENST00000384250 140 ntBASIC-2.95□□□□□ -2.88
LIMS3P0CW19 RNU7-200P-201ENST00000516105 62 ntBASIC-2.95□□□□□ -2.88
LIMS3P0CW19 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.96□□□□□ -2.88
LIMS3P0CW19 RNY4P7-201ENST00000364600 96 ntBASIC-2.96□□□□□ -2.88
LIMS3P0CW19 RNU6-982P-201ENST00000516216 102 ntBASIC-2.96□□□□□ -2.88
LIMS3P0CW19 MIR548V-201ENST00000584165 80 ntBASIC-2.96□□□□□ -2.88
LIMS3P0CW19 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.96□□□□□ -2.88
LIMS3P0CW19 RNU6-886P-201ENST00000384319 105 ntBASIC-2.97□□□□□ -2.88
LIMS3P0CW19 MIR466-201ENST00000580653 84 ntBASIC-2.97□□□□□ -2.88
LIMS3P0CW19 RNU6-633P-201ENST00000362612 103 ntBASIC-2.98□□□□□ -2.89
LIMS3P0CW19 RNU6-247P-201ENST00000362636 107 ntBASIC-2.98□□□□□ -2.89
LIMS3P0CW19 RNU6-330P-201ENST00000363015 107 ntBASIC-2.98□□□□□ -2.89
LIMS3P0CW19 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.98□□□□□ -2.89
LIMS3P0CW19 MIR4748-201ENST00000578076 82 ntBASIC-2.98□□□□□ -2.89
LIMS3P0CW19 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.98□□□□□ -2.89
LIMS3P0CW19 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.98□□□□□ -2.89
LIMS3P0CW19 SNORD45.1-201ENST00000363181 77 ntBASIC-2.99□□□□□ -2.89
LIMS3P0CW19 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.99□□□□□ -2.89
LIMS3P0CW19 AC093729.1-201ENST00000513074 128 ntBASIC-2.99□□□□□ -2.89
LIMS3P0CW19 RNU6-463P-201ENST00000384340 107 ntBASIC-3□□□□□ -2.89
LIMS3P0CW19 MTND4LP1-201ENST00000446263 157 ntBASIC-3.01□□□□□ -2.89
LIMS3P0CW19 RNU6-557P-201ENST00000516842 110 ntBASIC-3.01□□□□□ -2.89
LIMS3P0CW19 SNORD116-16-201ENST00000384533 92 ntBASIC-3.02□□□□□ -2.89
LIMS3P0CW19 RNU6-109P-201ENST00000516364 107 ntBASIC-3.02□□□□□ -2.89
LIMS3P0CW19 RNU6-184P-201ENST00000516514 107 ntBASIC-3.02□□□□□ -2.89
LIMS3P0CW19 MIR548W-201ENST00000581970 74 ntBASIC-3.02□□□□□ -2.89
LIMS3P0CW19 RNA5SP215-201ENST00000363440 122 ntBASIC-3.03□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms