Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.22□□□□□ -2.44
HOXC4P09017 SNORA72.7-201ENST00000516349 94 ntBASIC-0.22□□□□□ -2.44
HOXC4P09017 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.22□□□□□ -2.44
HOXC4P09017 MIR4263-201ENST00000584745 83 ntBASIC-0.22□□□□□ -2.44
HOXC4P09017 MIR6854-201ENST00000614935 69 ntBASIC-0.22□□□□□ -2.44
HOXC4P09017 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.23□□□□□ -2.45
HOXC4P09017 RNU6-411P-201ENST00000384451 107 ntBASIC-0.23□□□□□ -2.45
HOXC4P09017 RNU6-35P-201ENST00000384530 107 ntBASIC-0.23□□□□□ -2.45
HOXC4P09017 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.23□□□□□ -2.45
HOXC4P09017 MIR6851-201ENST00000617060 67 ntBASIC-0.23□□□□□ -2.45
HOXC4P09017 MIR6888-201ENST00000621977 67 ntBASIC-0.23□□□□□ -2.45
HOXC4P09017 RNU7-174P-201ENST00000516248 59 ntBASIC-0.24□□□□□ -2.45
HOXC4P09017 RNA5SP470-201ENST00000516463 106 ntBASIC-0.24□□□□□ -2.45
HOXC4P09017 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.24□□□□□ -2.45
HOXC4P09017 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.24□□□□□ -2.45
HOXC4P09017 AC093726.3-201ENST00000637588 150 ntBASIC-0.24□□□□□ -2.45
HOXC4P09017 RNU6-668P-201ENST00000364180 107 ntBASIC-0.25□□□□□ -2.45
HOXC4P09017 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.25□□□□□ -2.45
HOXC4P09017 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.25□□□□□ -2.45
HOXC4P09017 MIR4645-201ENST00000583158 77 ntBASIC-0.25□□□□□ -2.45
HOXC4P09017 MIR548V-201ENST00000584165 80 ntBASIC-0.25□□□□□ -2.45
HOXC4P09017 AP001180.6-201ENST00000584918 159 ntBASIC-0.25□□□□□ -2.45
HOXC4P09017 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.26□□□□□ -2.45
HOXC4P09017 SNORD114-28-201ENST00000363610 72 ntBASIC-0.26□□□□□ -2.45
HOXC4P09017 RNU6-540P-201ENST00000384622 101 ntBASIC-0.26□□□□□ -2.45
HOXC4P09017 AL021921.1-201ENST00000442774 93 ntBASIC-0.26□□□□□ -2.45
HOXC4P09017 MTND4LP1-201ENST00000446263 157 ntBASIC-0.26□□□□□ -2.45
HOXC4P09017 RNU7-154P-201ENST00000516194 62 ntBASIC-0.26□□□□□ -2.45
HOXC4P09017 AL445584.3-201ENST00000617173 78 ntBASIC-0.26□□□□□ -2.45
HOXC4P09017 RNU6-895P-201ENST00000384125 103 ntBASIC-0.27□□□□□ -2.45
HOXC4P09017 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.27□□□□□ -2.45
HOXC4P09017 MIR124-2-201ENST00000385081 109 ntBASIC-0.27□□□□□ -2.45
HOXC4P09017 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.27□□□□□ -2.45
HOXC4P09017 U4.4-201ENST00000620626 117 ntBASIC-0.27□□□□□ -2.45
HOXC4P09017 RNU6-776P-201ENST00000364403 104 ntBASIC-0.28□□□□□ -2.45
HOXC4P09017 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.28□□□□□ -2.45
HOXC4P09017 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.28□□□□□ -2.45
HOXC4P09017 SNORA62.4-201ENST00000365504 151 ntBASIC-0.28□□□□□ -2.45
HOXC4P09017 MIR630-201ENST00000384957 97 ntBASIC-0.28□□□□□ -2.45
HOXC4P09017 MIR517B-201ENST00000385102 67 ntBASIC-0.28□□□□□ -2.45
HOXC4P09017 RNU6-634P-201ENST00000459134 106 ntBASIC-0.28□□□□□ -2.45
HOXC4P09017 RNU6-320P-201ENST00000516511 106 ntBASIC-0.28□□□□□ -2.45
HOXC4P09017 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.29□□□□□ -2.46
HOXC4P09017 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.29□□□□□ -2.46
HOXC4P09017 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.29□□□□□ -2.46
HOXC4P09017 MIR196A2-201ENST00000385189 110 ntBASIC-0.29□□□□□ -2.46
HOXC4P09017 MIR204-201ENST00000385200 110 ntBASIC-0.29□□□□□ -2.46
HOXC4P09017 SNORD22.1-201ENST00000516331 125 ntBASIC-0.29□□□□□ -2.46
HOXC4P09017 MIR4493-201ENST00000584016 73 ntBASIC-0.29□□□□□ -2.46
HOXC4P09017 AC108676.2-201ENST00000605225 163 ntBASIC-0.29□□□□□ -2.46
HOXC4P09017 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.3□□□□□ -2.46
HOXC4P09017 MIR518B-201ENST00000385127 83 ntBASIC-0.3□□□□□ -2.46
HOXC4P09017 MIR1265-201ENST00000408444 86 ntBASIC-0.3□□□□□ -2.46
HOXC4P09017 RNU6-721P-201ENST00000410155 105 ntBASIC-0.3□□□□□ -2.46
HOXC4P09017 MIR101-1-201ENST00000362265 75 ntBASIC-0.31□□□□□ -2.46
HOXC4P09017 RNA5SP215-201ENST00000363440 122 ntBASIC-0.31□□□□□ -2.46
HOXC4P09017 RNU6-698P-201ENST00000363523 107 ntBASIC-0.31□□□□□ -2.46
HOXC4P09017 RNU6-34P-201ENST00000364874 107 ntBASIC-0.31□□□□□ -2.46
HOXC4P09017 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.31□□□□□ -2.46
HOXC4P09017 RNU6-246P-201ENST00000384702 107 ntBASIC-0.31□□□□□ -2.46
HOXC4P09017 SNORD126-201ENST00000459475 77 ntBASIC-0.31□□□□□ -2.46
HOXC4P09017 SNORD14C-201ENST00000365382 88 ntBASIC-0.32□□□□□ -2.46
HOXC4P09017 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.32□□□□□ -2.46
HOXC4P09017 RNU6-663P-201ENST00000391105 106 ntBASIC-0.32□□□□□ -2.46
HOXC4P09017 MIR3179-1-201ENST00000578940 84 ntBASIC-0.32□□□□□ -2.46
HOXC4P09017 MIR3179-2-201ENST00000579107 84 ntBASIC-0.32□□□□□ -2.46
HOXC4P09017 MIR3179-3-201ENST00000579566 84 ntBASIC-0.32□□□□□ -2.46
HOXC4P09017 MIR4436A-201ENST00000585278 85 ntBASIC-0.32□□□□□ -2.46
HOXC4P09017 MIR8064-201ENST00000612863 90 ntBASIC-0.32□□□□□ -2.46
HOXC4P09017 MIR3179-4-201ENST00000617599 84 ntBASIC-0.32□□□□□ -2.46
HOXC4P09017 MIR4662A-201ENST00000637499 67 ntBASIC-0.32□□□□□ -2.46
HOXC4P09017 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.33□□□□□ -2.46
HOXC4P09017 RNA5SP275-201ENST00000363936 118 ntBASIC-0.33□□□□□ -2.46
HOXC4P09017 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.33□□□□□ -2.46
HOXC4P09017 MIR604-201ENST00000384880 94 ntBASIC-0.33□□□□□ -2.46
HOXC4P09017 SNORD113-2-201ENST00000391082 72 ntBASIC-0.33□□□□□ -2.46
HOXC4P09017 SNORD30.1-201ENST00000391309 70 ntBASIC-0.33□□□□□ -2.46
HOXC4P09017 RNU6-284P-201ENST00000411105 106 ntBASIC-0.33□□□□□ -2.46
HOXC4P09017 MIR6086-201ENST00000638065 55 ntBASIC-0.33□□□□□ -2.46
HOXC4P09017 SNORD74.6-201ENST00000364796 70 ntBASIC-0.34□□□□□ -2.46
HOXC4P09017 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.34□□□□□ -2.46
HOXC4P09017 AP000533.3-201ENST00000447704 118 ntBASIC-0.34□□□□□ -2.46
HOXC4P09017 SNORD18.2-201ENST00000459604 70 ntBASIC-0.34□□□□□ -2.46
HOXC4P09017 RNU6-758P-201ENST00000516292 89 ntBASIC-0.34□□□□□ -2.46
HOXC4P09017 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.35□□□□□ -2.47
HOXC4P09017 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.35□□□□□ -2.47
HOXC4P09017 RNA5SP368-201ENST00000364298 116 ntBASIC-0.35□□□□□ -2.47
HOXC4P09017 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.35□□□□□ -2.47
HOXC4P09017 RNU6-630P-201ENST00000391258 106 ntBASIC-0.35□□□□□ -2.47
HOXC4P09017 SNORA3B-201ENST00000391305 131 ntBASIC-0.35□□□□□ -2.47
HOXC4P09017 SNORD75.1-201ENST00000408373 60 ntBASIC-0.35□□□□□ -2.47
HOXC4P09017 Z95118.1-201ENST00000421372 247 ntBASIC-0.35□□□□□ -2.47
HOXC4P09017 RNU7-88P-201ENST00000458752 63 ntBASIC-0.35□□□□□ -2.47
HOXC4P09017 U7.5-201ENST00000517224 61 ntBASIC-0.35□□□□□ -2.47
HOXC4P09017 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.36□□□□□ -2.47
HOXC4P09017 RNU6-458P-201ENST00000384179 107 ntBASIC-0.36□□□□□ -2.47
HOXC4P09017 SNORA41B-201ENST00000384785 128 ntBASIC-0.36□□□□□ -2.47
HOXC4P09017 MIR527-201ENST00000385244 85 ntBASIC-0.36□□□□□ -2.47
HOXC4P09017 RNA5SP451-201ENST00000410588 110 ntBASIC-0.36□□□□□ -2.47
HOXC4P09017 RNU6-638P-201ENST00000516582 104 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 228 ms