Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC093729.1-201ENST00000513074 128 ntBASIC-1.18□□□□□ -2.6
CD74P04233 MIR5591-201ENST00000578248 65 ntBASIC-1.18□□□□□ -2.6
CD74P04233 MIR4770-201ENST00000579149 58 ntBASIC-1.18□□□□□ -2.6
CD74P04233 MIR4520-1-201ENST00000582609 70 ntBASIC-1.18□□□□□ -2.6
CD74P04233 MIR6502-201ENST00000617296 76 ntBASIC-1.18□□□□□ -2.6
CD74P04233 MIR2052-201ENST00000636055 55 ntBASIC-1.18□□□□□ -2.6
CD74P04233 RNU6-22P-201ENST00000384355 107 ntBASIC-1.19□□□□□ -2.6
CD74P04233 MT-TR-201ENST00000387439 65 ntBASIC-1.19□□□□□ -2.6
CD74P04233 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.19□□□□□ -2.6
CD74P04233 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.19□□□□□ -2.6
CD74P04233 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.19□□□□□ -2.6
CD74P04233 RNU6-158P-201ENST00000517104 100 ntBASIC-1.19□□□□□ -2.6
CD74P04233 RNU6-834P-201ENST00000362367 110 ntBASIC-1.2□□□□□ -2.6
CD74P04233 RNU6-226P-201ENST00000363778 107 ntBASIC-1.2□□□□□ -2.6
CD74P04233 RNU6-645P-201ENST00000364649 106 ntBASIC-1.2□□□□□ -2.6
CD74P04233 U2.7-201ENST00000619197 100 ntBASIC-1.2□□□□□ -2.6
CD74P04233 MIR5683-201ENST00000636514 76 ntBASIC-1.2□□□□□ -2.6
CD74P04233 RNU6-164P-201ENST00000364604 103 ntBASIC-1.21□□□□□ -2.6
CD74P04233 SNORD116-22-201ENST00000384430 92 ntBASIC-1.21□□□□□ -2.6
CD74P04233 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.21□□□□□ -2.6
CD74P04233 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.21□□□□□ -2.6
CD74P04233 RNA5SP180-201ENST00000516181 101 ntBASIC-1.21□□□□□ -2.6
CD74P04233 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.21□□□□□ -2.6
CD74P04233 MIR548M-201ENST00000408260 86 ntBASIC-1.22□□□□□ -2.6
CD74P04233 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.22□□□□□ -2.6
CD74P04233 RNU6-330P-201ENST00000363015 107 ntBASIC-1.23□□□□□ -2.61
CD74P04233 RNU6-624P-201ENST00000363411 107 ntBASIC-1.23□□□□□ -2.61
CD74P04233 RNU6-478P-201ENST00000363904 110 ntBASIC-1.23□□□□□ -2.61
CD74P04233 RNU6-402P-201ENST00000410678 103 ntBASIC-1.23□□□□□ -2.61
CD74P04233 RNU6-267P-201ENST00000516714 103 ntBASIC-1.23□□□□□ -2.61
CD74P04233 RNU6-313P-201ENST00000516317 112 ntBASIC-1.24□□□□□ -2.61
CD74P04233 SNORA40.13-201ENST00000516379 120 ntBASIC-1.24□□□□□ -2.61
CD74P04233 RNA5SP461-201ENST00000516451 104 ntBASIC-1.24□□□□□ -2.61
CD74P04233 RNU6-807P-201ENST00000516805 107 ntBASIC-1.24□□□□□ -2.61
CD74P04233 MIR3675-201ENST00000583661 73 ntBASIC-1.24□□□□□ -2.61
CD74P04233 MALAT1.1-201ENST00000618249 95 ntBASIC-1.24□□□□□ -2.61
CD74P04233 AP001318.4-201ENST00000616637 121 ntBASIC-1.25□□□□□ -2.61
CD74P04233 RNU6-219P-201ENST00000364728 107 ntBASIC-1.26□□□□□ -2.61
CD74P04233 SNORA8.1-201ENST00000384250 140 ntBASIC-1.26□□□□□ -2.61
CD74P04233 RNU6-168P-201ENST00000516189 101 ntBASIC-1.26□□□□□ -2.61
CD74P04233 MIR548BB-201ENST00000626714 66 ntBASIC-1.26□□□□□ -2.61
CD74P04233 MIR365A-201ENST00000362260 87 ntBASIC-1.27□□□□□ -2.61
CD74P04233 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.27□□□□□ -2.61
CD74P04233 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.27□□□□□ -2.61
CD74P04233 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.27□□□□□ -2.61
CD74P04233 MIR520D-201ENST00000385002 87 ntBASIC-1.27□□□□□ -2.61
CD74P04233 MIR548Q-201ENST00000408404 100 ntBASIC-1.27□□□□□ -2.61
CD74P04233 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.27□□□□□ -2.61
CD74P04233 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.27□□□□□ -2.61
CD74P04233 RNU6-303P-201ENST00000517091 106 ntBASIC-1.27□□□□□ -2.61
CD74P04233 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.27□□□□□ -2.61
CD74P04233 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.27□□□□□ -2.61
CD74P04233 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.28□□□□□ -2.61
CD74P04233 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.28□□□□□ -2.61
CD74P04233 SNORD114-3-201ENST00000364969 75 ntBASIC-1.28□□□□□ -2.61
CD74P04233 RNU6-608P-201ENST00000383927 104 ntBASIC-1.28□□□□□ -2.61
CD74P04233 RNU6-604P-201ENST00000390917 100 ntBASIC-1.28□□□□□ -2.61
CD74P04233 RNY4P18-201ENST00000391107 89 ntBASIC-1.28□□□□□ -2.61
CD74P04233 MIR4490-201ENST00000582647 84 ntBASIC-1.28□□□□□ -2.61
CD74P04233 MIR1246-201ENST00000636535 73 ntBASIC-1.28□□□□□ -2.61
CD74P04233 SNORD45.1-201ENST00000363181 77 ntBASIC-1.29□□□□□ -2.62
CD74P04233 RNU6-686P-201ENST00000364839 107 ntBASIC-1.29□□□□□ -2.62
CD74P04233 MIR1285-2-201ENST00000408311 88 ntBASIC-1.29□□□□□ -2.62
CD74P04233 RNU6-982P-201ENST00000516216 102 ntBASIC-1.29□□□□□ -2.62
CD74P04233 RNU6-557P-201ENST00000516842 110 ntBASIC-1.29□□□□□ -2.62
CD74P04233 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.3□□□□□ -2.62
CD74P04233 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.3□□□□□ -2.62
CD74P04233 RNU6-458P-201ENST00000384179 107 ntBASIC-1.3□□□□□ -2.62
CD74P04233 MIR487B-201ENST00000385021 84 ntBASIC-1.3□□□□□ -2.62
CD74P04233 RNA5SP86-201ENST00000390869 98 ntBASIC-1.3□□□□□ -2.62
CD74P04233 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.3□□□□□ -2.62
CD74P04233 U6.58-201ENST00000613107 107 ntBASIC-1.3□□□□□ -2.62
CD74P04233 U4.2-201ENST00000618561 85 ntBASIC-1.3□□□□□ -2.62
CD74P04233 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.31□□□□□ -2.62
CD74P04233 RNU6-630P-201ENST00000391258 106 ntBASIC-1.31□□□□□ -2.62
CD74P04233 MIR4484-201ENST00000582855 83 ntBASIC-1.31□□□□□ -2.62
CD74P04233 RNU6-598P-201ENST00000364017 105 ntBASIC-1.32□□□□□ -2.62
CD74P04233 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.32□□□□□ -2.62
CD74P04233 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.32□□□□□ -2.62
CD74P04233 RNU7-174P-201ENST00000516248 59 ntBASIC-1.32□□□□□ -2.62
CD74P04233 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.32□□□□□ -2.62
CD74P04233 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.32□□□□□ -2.62
CD74P04233 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.33□□□□□ -2.62
CD74P04233 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.33□□□□□ -2.62
CD74P04233 MIR488-201ENST00000365739 83 ntBASIC-1.33□□□□□ -2.62
CD74P04233 RNU6-129P-201ENST00000391022 107 ntBASIC-1.33□□□□□ -2.62
CD74P04233 MIR1207-201ENST00000408249 87 ntBASIC-1.33□□□□□ -2.62
CD74P04233 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
CD74P04233 U2.18-201ENST00000622185 84 ntBASIC-1.33□□□□□ -2.62
CD74P04233 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.34□□□□□ -2.62
CD74P04233 RNU6-79P-201ENST00000362511 107 ntBASIC-1.34□□□□□ -2.62
CD74P04233 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.34□□□□□ -2.62
CD74P04233 RNU6-497P-201ENST00000365316 104 ntBASIC-1.34□□□□□ -2.62
CD74P04233 AC074348.1-201ENST00000426503 132 ntBASIC-1.34□□□□□ -2.62
CD74P04233 MIR3910-1-201ENST00000580936 111 ntBASIC-1.34□□□□□ -2.62
CD74P04233 MIR548V-201ENST00000584165 80 ntBASIC-1.35□□□□□ -2.63
CD74P04233 U4.4-201ENST00000620626 117 ntBASIC-1.35□□□□□ -2.63
CD74P04233 SNORA63.4-201ENST00000362763 126 ntBASIC-1.36□□□□□ -2.63
CD74P04233 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.36□□□□□ -2.63
CD74P04233 RNU6-563P-201ENST00000364872 108 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 216.6 ms