Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.27□□□□□ -2.37
COL2A1P02458 IGLVI-20-201ENST00000519296 130 ntBASIC0.27□□□□□ -2.37
COL2A1P02458 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
COL2A1P02458 SNORD115-25-201ENST00000362619 82 ntBASIC0.26□□□□□ -2.37
COL2A1P02458 MIR4723-201ENST00000585070 81 ntBASIC0.26□□□□□ -2.37
COL2A1P02458 RNU6-940P-201ENST00000363433 104 ntBASIC0.25□□□□□ -2.37
COL2A1P02458 RNU6-302P-201ENST00000365249 107 ntBASIC0.25□□□□□ -2.37
COL2A1P02458 RNA5SP266-201ENST00000410273 108 ntBASIC0.25□□□□□ -2.37
COL2A1P02458 RNA5SP163-201ENST00000410304 99 ntBASIC0.25□□□□□ -2.37
COL2A1P02458 MIR3938-201ENST00000582157 103 ntBASIC0.25□□□□□ -2.37
COL2A1P02458 RNU6-1312P-201ENST00000362425 108 ntBASIC0.24□□□□□ -2.37
COL2A1P02458 SNORD113-4-201ENST00000364802 75 ntBASIC0.24□□□□□ -2.37
COL2A1P02458 MIRLET7B-201ENST00000385140 83 ntBASIC0.24□□□□□ -2.37
COL2A1P02458 MIR6514-201ENST00000622549 70 ntBASIC0.24□□□□□ -2.37
COL2A1P02458 Y_RNA.74-201ENST00000362911 99 ntBASIC0.23□□□□□ -2.37
COL2A1P02458 Y_RNA.282-201ENST00000364793 102 ntBASIC0.23□□□□□ -2.37
COL2A1P02458 RNU6-614P-201ENST00000384369 107 ntBASIC0.23□□□□□ -2.37
COL2A1P02458 AL021921.1-201ENST00000442774 93 ntBASIC0.23□□□□□ -2.37
COL2A1P02458 RNA5SP67-201ENST00000516422 131 ntBASIC0.23□□□□□ -2.37
COL2A1P02458 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
COL2A1P02458 AL353803.5-201ENST00000599815 141 ntBASIC0.23□□□□□ -2.37
COL2A1P02458 U6.59-201ENST00000615686 107 ntBASIC0.23□□□□□ -2.37
COL2A1P02458 Y_RNA.109-201ENST00000363215 102 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 SNORD116.2-201ENST00000391251 93 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 AC079150.2-201ENST00000443733 78 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 RNU7-88P-201ENST00000458752 63 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 MIR5704-201ENST00000584029 77 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 Y_RNA.236-201ENST00000364427 111 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 RNU6-122P-201ENST00000516818 107 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 MIR4493-201ENST00000584016 73 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 AC108676.2-201ENST00000605225 163 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 MIR8068-201ENST00000618032 68 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 snoR1.1-201ENST00000628177 80 ntBASIC0.22□□□□□ -2.37
COL2A1P02458 MIR579-201ENST00000385221 98 ntBASIC0.21□□□□□ -2.38
COL2A1P02458 MIR876-201ENST00000401147 81 ntBASIC0.21□□□□□ -2.38
COL2A1P02458 MIR548H2-201ENST00000408874 88 ntBASIC0.21□□□□□ -2.38
COL2A1P02458 MIR4432-201ENST00000581823 84 ntBASIC0.21□□□□□ -2.38
COL2A1P02458 AC104408.1-201ENST00000605241 170 ntBASIC0.21□□□□□ -2.38
COL2A1P02458 MIR7978-201ENST00000636158 59 ntBASIC0.21□□□□□ -2.38
COL2A1P02458 AC090625.1-201ENST00000357130 210 ntBASIC0.2□□□□□ -2.38
COL2A1P02458 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
COL2A1P02458 MIR604-201ENST00000384880 94 ntBASIC0.2□□□□□ -2.38
COL2A1P02458 MIR6507-201ENST00000613630 70 ntBASIC0.2□□□□□ -2.38
COL2A1P02458 SNORD114-5-201ENST00000362928 70 ntBASIC0.19□□□□□ -2.38
COL2A1P02458 RNU6-455P-201ENST00000384681 107 ntBASIC0.19□□□□□ -2.38
COL2A1P02458 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.19□□□□□ -2.38
COL2A1P02458 RNU6-848P-201ENST00000515948 107 ntBASIC0.19□□□□□ -2.38
COL2A1P02458 RNU6-617P-201ENST00000516147 107 ntBASIC0.19□□□□□ -2.38
COL2A1P02458 RNU6-473P-201ENST00000516164 107 ntBASIC0.19□□□□□ -2.38
COL2A1P02458 RNU6-1049P-201ENST00000516414 107 ntBASIC0.19□□□□□ -2.38
COL2A1P02458 RNA5SP134-201ENST00000516492 96 ntBASIC0.19□□□□□ -2.38
COL2A1P02458 U2.18-201ENST00000622185 84 ntBASIC0.19□□□□□ -2.38
COL2A1P02458 SNORD114-31-201ENST00000363219 75 ntBASIC0.18□□□□□ -2.38
COL2A1P02458 SNORD95.1-201ENST00000364099 68 ntBASIC0.18□□□□□ -2.38
COL2A1P02458 Y_RNA.457-201ENST00000384237 111 ntBASIC0.18□□□□□ -2.38
COL2A1P02458 MIR145-201ENST00000384967 88 ntBASIC0.18□□□□□ -2.38
COL2A1P02458 RNU6-1133P-201ENST00000410963 100 ntBASIC0.18□□□□□ -2.38
COL2A1P02458 AL445193.1-201ENST00000441183 141 ntBASIC0.18□□□□□ -2.38
COL2A1P02458 SNORD2-201ENST00000459163 69 ntBASIC0.18□□□□□ -2.38
COL2A1P02458 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
COL2A1P02458 AP001180.6-201ENST00000584918 159 ntBASIC0.18□□□□□ -2.38
COL2A1P02458 MIR6888-201ENST00000621977 67 ntBASIC0.18□□□□□ -2.38
COL2A1P02458 RNU6-458P-201ENST00000384179 107 ntBASIC0.17□□□□□ -2.38
COL2A1P02458 MIR124-2-201ENST00000385081 109 ntBASIC0.17□□□□□ -2.38
COL2A1P02458 RNU4-37P-201ENST00000410214 84 ntBASIC0.17□□□□□ -2.38
COL2A1P02458 MIR1468-201ENST00000410600 86 ntBASIC0.17□□□□□ -2.38
COL2A1P02458 MIR4768-201ENST00000585270 74 ntBASIC0.17□□□□□ -2.38
COL2A1P02458 U6.58-201ENST00000613107 107 ntBASIC0.17□□□□□ -2.38
COL2A1P02458 AL391099.1-201ENST00000624635 187 ntBASIC0.17□□□□□ -2.38
COL2A1P02458 RNU6-810P-201ENST00000364001 107 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 RNU6-598P-201ENST00000364017 105 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 RNU6-669P-201ENST00000365575 107 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 Y_RNA.610-201ENST00000410681 103 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 Y_RNA.698-201ENST00000516798 118 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 U7.5-201ENST00000517224 61 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 RNU6-929P-201ENST00000384429 107 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 SNORD116-16-201ENST00000384533 92 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 RNU6-901P-201ENST00000384593 106 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 RNU6-246P-201ENST00000384702 107 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 RNU6-987P-201ENST00000384759 104 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 RNU6-172P-201ENST00000411000 93 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 RNA5SP470-201ENST00000516463 106 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 RNU6-231P-201ENST00000517122 103 ntBASIC0.16□□□□□ -2.38
COL2A1P02458 SNORD1B-201ENST00000363091 84 ntBASIC0.15□□□□□ -2.39
COL2A1P02458 MIR610-201ENST00000385139 96 ntBASIC0.15□□□□□ -2.39
COL2A1P02458 RNU6-180P-201ENST00000516697 61 ntBASIC0.15□□□□□ -2.39
COL2A1P02458 SNORD114-9-201ENST00000364370 72 ntBASIC0.14□□□□□ -2.39
COL2A1P02458 SNORD115-23-201ENST00000364461 82 ntBASIC0.14□□□□□ -2.39
COL2A1P02458 RNU6-1327P-201ENST00000365302 105 ntBASIC0.14□□□□□ -2.39
COL2A1P02458 RNU6-936P-201ENST00000384005 107 ntBASIC0.14□□□□□ -2.39
COL2A1P02458 RNU7-154P-201ENST00000516194 62 ntBASIC0.14□□□□□ -2.39
COL2A1P02458 MIR4464-201ENST00000580818 92 ntBASIC0.14□□□□□ -2.39
COL2A1P02458 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.14□□□□□ -2.39
COL2A1P02458 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
COL2A1P02458 AC244250.2-201ENST00000418731 148 ntBASIC0.13□□□□□ -2.39
COL2A1P02458 RNU6-1262P-201ENST00000516217 96 ntBASIC0.13□□□□□ -2.39
COL2A1P02458 CR383656.4-201ENST00000546909 122 ntBASIC0.13□□□□□ -2.39
COL2A1P02458 MIR4315-1-201ENST00000636800 73 ntBASIC0.13□□□□□ -2.39
COL2A1P02458 MIR4315-2-201ENST00000640925 73 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms