Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 Y_RNA.115-201ENST00000363272 98 ntBASIC1.03□□□□□ -2.24
ALDH1A1P00352 AC098934.3-201ENST00000430450 190 ntBASIC1.03□□□□□ -2.24
ALDH1A1P00352 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.03□□□□□ -2.24
ALDH1A1P00352 AP000676.1-201ENST00000533307 52 ntBASIC1.03□□□□□ -2.24
ALDH1A1P00352 Y_RNA.68-201ENST00000362881 102 ntBASIC1.02□□□□□ -2.25
ALDH1A1P00352 RNA5SP128-201ENST00000365305 116 ntBASIC1.02□□□□□ -2.25
ALDH1A1P00352 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
ALDH1A1P00352 MIR936-201ENST00000401264 98 ntBASIC1.01□□□□□ -2.25
ALDH1A1P00352 SNORD57-201ENST00000448188 72 ntBASIC1.01□□□□□ -2.25
ALDH1A1P00352 MIR4464-201ENST00000580818 92 ntBASIC1.01□□□□□ -2.25
ALDH1A1P00352 Y_RNA.139-201ENST00000363464 102 ntBASIC1□□□□□ -2.25
ALDH1A1P00352 U7.5-201ENST00000517224 61 ntBASIC1□□□□□ -2.25
ALDH1A1P00352 RNU6-945P-201ENST00000383947 107 ntBASIC0.99□□□□□ -2.25
ALDH1A1P00352 MIR6888-201ENST00000621977 67 ntBASIC0.99□□□□□ -2.25
ALDH1A1P00352 MIR499B-201ENST00000636498 73 ntBASIC0.99□□□□□ -2.25
ALDH1A1P00352 RNA5SP330-201ENST00000517096 96 ntBASIC0.97□□□□□ -2.25
ALDH1A1P00352 RNU6-1174P-201ENST00000517278 101 ntBASIC0.97□□□□□ -2.25
ALDH1A1P00352 snoR1.1-201ENST00000628177 80 ntBASIC0.97□□□□□ -2.25
ALDH1A1P00352 Y_RNA.433-201ENST00000384089 102 ntBASIC0.96□□□□□ -2.26
ALDH1A1P00352 RNU6-974P-201ENST00000384099 108 ntBASIC0.96□□□□□ -2.26
ALDH1A1P00352 RNU6-110P-201ENST00000384508 104 ntBASIC0.96□□□□□ -2.26
ALDH1A1P00352 RNU6-724P-201ENST00000390958 105 ntBASIC0.96□□□□□ -2.26
ALDH1A1P00352 RNU7-88P-201ENST00000458752 63 ntBASIC0.96□□□□□ -2.26
ALDH1A1P00352 AL445584.3-201ENST00000617173 78 ntBASIC0.96□□□□□ -2.26
ALDH1A1P00352 MTRNR2L9-201ENST00000622562 75 ntBASIC0.96□□□□□ -2.26
ALDH1A1P00352 SCARNA11.2-201ENST00000517183 154 ntBASIC0.95□□□□□ -2.26
ALDH1A1P00352 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
ALDH1A1P00352 MIR6835-201ENST00000621552 64 ntBASIC0.95□□□□□ -2.26
ALDH1A1P00352 RNU6-1204P-201ENST00000363948 107 ntBASIC0.94□□□□□ -2.26
ALDH1A1P00352 RNU6-863P-201ENST00000515989 104 ntBASIC0.93□□□□□ -2.26
ALDH1A1P00352 SNORD63.1-201ENST00000516178 80 ntBASIC0.93□□□□□ -2.26
ALDH1A1P00352 RNA5SP98-201ENST00000363158 137 ntBASIC0.92□□□□□ -2.26
ALDH1A1P00352 MIR29B1-201ENST00000385015 81 ntBASIC0.92□□□□□ -2.26
ALDH1A1P00352 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.92□□□□□ -2.26
ALDH1A1P00352 RNA5SP121-201ENST00000516537 101 ntBASIC0.92□□□□□ -2.26
ALDH1A1P00352 MIR8087-201ENST00000612745 78 ntBASIC0.92□□□□□ -2.26
ALDH1A1P00352 RNA5SP257-201ENST00000363023 116 ntBASIC0.91□□□□□ -2.26
ALDH1A1P00352 SNORD45.2-201ENST00000363552 72 ntBASIC0.91□□□□□ -2.26
ALDH1A1P00352 SNORA62.4-201ENST00000365504 151 ntBASIC0.91□□□□□ -2.26
ALDH1A1P00352 RNU7-55P-201ENST00000459426 62 ntBASIC0.91□□□□□ -2.26
ALDH1A1P00352 RNU7-129P-201ENST00000516128 62 ntBASIC0.91□□□□□ -2.26
ALDH1A1P00352 MIR330-201ENST00000362196 94 ntBASIC0.9□□□□□ -2.27
ALDH1A1P00352 MIR508-201ENST00000384857 115 ntBASIC0.9□□□□□ -2.27
ALDH1A1P00352 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
ALDH1A1P00352 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
ALDH1A1P00352 AL391099.1-201ENST00000624635 187 ntBASIC0.9□□□□□ -2.27
ALDH1A1P00352 RNA5SP347-201ENST00000362445 119 ntBASIC0.89□□□□□ -2.27
ALDH1A1P00352 SNORD44.1-201ENST00000363202 61 ntBASIC0.89□□□□□ -2.27
ALDH1A1P00352 MIR4711-201ENST00000578274 70 ntBASIC0.89□□□□□ -2.27
ALDH1A1P00352 MIR6866-201ENST00000638146 69 ntBASIC0.89□□□□□ -2.27
ALDH1A1P00352 MIR3170-201ENST00000582699 77 ntBASIC0.88□□□□□ -2.27
ALDH1A1P00352 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
ALDH1A1P00352 RNU6-973P-201ENST00000364690 107 ntBASIC0.87□□□□□ -2.27
ALDH1A1P00352 RNU6-742P-201ENST00000365289 107 ntBASIC0.87□□□□□ -2.27
ALDH1A1P00352 RNA5SP193-201ENST00000410353 107 ntBASIC0.87□□□□□ -2.27
ALDH1A1P00352 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
ALDH1A1P00352 uc_338.36-201ENST00000622331 158 ntBASIC0.87□□□□□ -2.27
ALDH1A1P00352 RNU6-822P-201ENST00000362707 106 ntBASIC0.86□□□□□ -2.27
ALDH1A1P00352 Y_RNA.613-201ENST00000410726 97 ntBASIC0.86□□□□□ -2.27
ALDH1A1P00352 SNORD63.2-201ENST00000516303 64 ntBASIC0.86□□□□□ -2.27
ALDH1A1P00352 MIR548H4-201ENST00000408689 111 ntBASIC0.85□□□□□ -2.27
ALDH1A1P00352 RNU6-721P-201ENST00000410155 105 ntBASIC0.85□□□□□ -2.27
ALDH1A1P00352 RNU6-1133P-201ENST00000410963 100 ntBASIC0.85□□□□□ -2.27
ALDH1A1P00352 AC108740.1-201ENST00000498629 225 ntBASIC0.85□□□□□ -2.27
ALDH1A1P00352 AC096531.1-201ENST00000419107 107 ntBASIC0.84□□□□□ -2.27
ALDH1A1P00352 uc_338.17-201ENST00000619633 179 ntBASIC0.84□□□□□ -2.27
ALDH1A1P00352 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
ALDH1A1P00352 AC104408.1-201ENST00000605241 170 ntBASIC0.83□□□□□ -2.28
ALDH1A1P00352 RNU6-900P-201ENST00000384498 102 ntBASIC0.82□□□□□ -2.28
ALDH1A1P00352 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
ALDH1A1P00352 U6.103-201ENST00000637085 61 ntBASIC0.81□□□□□ -2.28
ALDH1A1P00352 Y_RNA.321-201ENST00000365149 102 ntBASIC0.8□□□□□ -2.28
ALDH1A1P00352 RNU6-127P-201ENST00000390897 107 ntBASIC0.8□□□□□ -2.28
ALDH1A1P00352 RNU6-1008P-201ENST00000384160 104 ntBASIC0.79□□□□□ -2.28
ALDH1A1P00352 RNU6-59P-201ENST00000384787 107 ntBASIC0.79□□□□□ -2.28
ALDH1A1P00352 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
ALDH1A1P00352 RNU6-530P-201ENST00000391180 107 ntBASIC0.79□□□□□ -2.28
ALDH1A1P00352 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
ALDH1A1P00352 RNU6-1111P-201ENST00000391118 107 ntBASIC0.78□□□□□ -2.28
ALDH1A1P00352 RNU6-732P-201ENST00000516033 103 ntBASIC0.78□□□□□ -2.28
ALDH1A1P00352 RNU6-1238P-201ENST00000517215 102 ntBASIC0.78□□□□□ -2.28
ALDH1A1P00352 MIR103A1-201ENST00000362165 78 ntBASIC0.77□□□□□ -2.29
ALDH1A1P00352 RNA5SP62-201ENST00000363457 110 ntBASIC0.77□□□□□ -2.29
ALDH1A1P00352 MIR1197-201ENST00000408818 88 ntBASIC0.77□□□□□ -2.29
ALDH1A1P00352 SNORA68.3-201ENST00000515906 83 ntBASIC0.76□□□□□ -2.29
ALDH1A1P00352 MIR5704-201ENST00000584029 77 ntBASIC0.76□□□□□ -2.29
ALDH1A1P00352 MIR8068-201ENST00000618032 68 ntBASIC0.76□□□□□ -2.29
ALDH1A1P00352 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
ALDH1A1P00352 RNU6-455P-201ENST00000384681 107 ntBASIC0.75□□□□□ -2.29
ALDH1A1P00352 RNU6-258P-201ENST00000390884 101 ntBASIC0.75□□□□□ -2.29
ALDH1A1P00352 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
ALDH1A1P00352 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.75□□□□□ -2.29
ALDH1A1P00352 MIR6514-201ENST00000622549 70 ntBASIC0.75□□□□□ -2.29
ALDH1A1P00352 MIR5087-201ENST00000635826 76 ntBASIC0.75□□□□□ -2.29
ALDH1A1P00352 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.74□□□□□ -2.29
ALDH1A1P00352 MIR1468-201ENST00000410600 86 ntBASIC0.73□□□□□ -2.29
ALDH1A1P00352 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.73□□□□□ -2.29
ALDH1A1P00352 CR383656.4-201ENST00000546909 122 ntBASIC0.73□□□□□ -2.29
ALDH1A1P00352 MIR6507-201ENST00000613630 70 ntBASIC0.73□□□□□ -2.29
ALDH1A1P00352 SNORA42.1-201ENST00000363515 137 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 247.1 ms