Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 RNU7-174P-201ENST00000516248 59 ntBASIC-1.62□□□□□ -2.67
RAB3DO95716 RNU6-303P-201ENST00000517091 106 ntBASIC-1.62□□□□□ -2.67
RAB3DO95716 RNU6-706P-201ENST00000517229 104 ntBASIC-1.62□□□□□ -2.67
RAB3DO95716 RNU6-458P-201ENST00000384179 107 ntBASIC-1.63□□□□□ -2.67
RAB3DO95716 SNORA8.1-201ENST00000384250 140 ntBASIC-1.63□□□□□ -2.67
RAB3DO95716 RNU6-604P-201ENST00000390917 100 ntBASIC-1.63□□□□□ -2.67
RAB3DO95716 U6.58-201ENST00000613107 107 ntBASIC-1.63□□□□□ -2.67
RAB3DO95716 MIR548BB-201ENST00000626714 66 ntBASIC-1.63□□□□□ -2.67
RAB3DO95716 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.64□□□□□ -2.67
RAB3DO95716 RNU6-22P-201ENST00000384355 107 ntBASIC-1.64□□□□□ -2.67
RAB3DO95716 RNU6-557P-201ENST00000516842 110 ntBASIC-1.64□□□□□ -2.67
RAB3DO95716 MIR3668-201ENST00000582138 75 ntBASIC-1.64□□□□□ -2.67
RAB3DO95716 AP001318.4-201ENST00000616637 121 ntBASIC-1.64□□□□□ -2.67
RAB3DO95716 MALAT1.1-201ENST00000618249 95 ntBASIC-1.64□□□□□ -2.67
RAB3DO95716 RNU6-497P-201ENST00000365316 104 ntBASIC-1.65□□□□□ -2.67
RAB3DO95716 AL078595.1-201ENST00000404458 226 ntBASIC-1.65□□□□□ -2.67
RAB3DO95716 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.65□□□□□ -2.67
RAB3DO95716 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.65□□□□□ -2.67
RAB3DO95716 MIR3671-201ENST00000580455 88 ntBASIC-1.65□□□□□ -2.67
RAB3DO95716 AC091912.2-201ENST00000624798 167 ntBASIC-1.65□□□□□ -2.67
RAB3DO95716 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.66□□□□□ -2.68
RAB3DO95716 SNORD45.1-201ENST00000363181 77 ntBASIC-1.66□□□□□ -2.68
RAB3DO95716 RNU6-164P-201ENST00000364604 103 ntBASIC-1.66□□□□□ -2.68
RAB3DO95716 RNU6-686P-201ENST00000364839 107 ntBASIC-1.66□□□□□ -2.68
RAB3DO95716 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.66□□□□□ -2.68
RAB3DO95716 MIR889-201ENST00000401280 79 ntBASIC-1.66□□□□□ -2.68
RAB3DO95716 AC074348.1-201ENST00000426503 132 ntBASIC-1.66□□□□□ -2.68
RAB3DO95716 MIR6874-201ENST00000635894 71 ntBASIC-1.66□□□□□ -2.68
RAB3DO95716 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.67□□□□□ -2.68
RAB3DO95716 MT-TR-201ENST00000387439 65 ntBASIC-1.67□□□□□ -2.68
RAB3DO95716 AC090616.4-201ENST00000448026 115 ntBASIC-1.67□□□□□ -2.68
RAB3DO95716 SNORA40.13-201ENST00000516379 120 ntBASIC-1.67□□□□□ -2.68
RAB3DO95716 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.68□□□□□ -2.68
RAB3DO95716 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.68□□□□□ -2.68
RAB3DO95716 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.69□□□□□ -2.68
RAB3DO95716 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.69□□□□□ -2.68
RAB3DO95716 RNY4P18-201ENST00000391107 89 ntBASIC-1.69□□□□□ -2.68
RAB3DO95716 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.69□□□□□ -2.68
RAB3DO95716 RNA5SP461-201ENST00000516451 104 ntBASIC-1.69□□□□□ -2.68
RAB3DO95716 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.7□□□□□ -2.68
RAB3DO95716 RNU6-587P-201ENST00000391282 106 ntBASIC-1.7□□□□□ -2.68
RAB3DO95716 MIR4484-201ENST00000582855 83 ntBASIC-1.7□□□□□ -2.68
RAB3DO95716 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.71□□□□□ -2.68
RAB3DO95716 RNU6-696P-201ENST00000390834 107 ntBASIC-1.71□□□□□ -2.68
RAB3DO95716 RNU6-129P-201ENST00000391022 107 ntBASIC-1.71□□□□□ -2.68
RAB3DO95716 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.71□□□□□ -2.68
RAB3DO95716 MIR488-201ENST00000365739 83 ntBASIC-1.72□□□□□ -2.68
RAB3DO95716 RNU6-313P-201ENST00000516317 112 ntBASIC-1.72□□□□□ -2.68
RAB3DO95716 U4.4-201ENST00000620626 117 ntBASIC-1.72□□□□□ -2.68
RAB3DO95716 MIR548M-201ENST00000408260 86 ntBASIC-1.73□□□□□ -2.69
RAB3DO95716 MIR548V-201ENST00000584165 80 ntBASIC-1.73□□□□□ -2.69
RAB3DO95716 RNU6-698P-201ENST00000363523 107 ntBASIC-1.74□□□□□ -2.69
RAB3DO95716 RNU6-34P-201ENST00000364874 107 ntBASIC-1.74□□□□□ -2.69
RAB3DO95716 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.74□□□□□ -2.69
RAB3DO95716 MIR409-201ENST00000362237 79 ntBASIC-1.75□□□□□ -2.69
RAB3DO95716 RNU6-598P-201ENST00000364017 105 ntBASIC-1.75□□□□□ -2.69
RAB3DO95716 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.75□□□□□ -2.69
RAB3DO95716 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.75□□□□□ -2.69
RAB3DO95716 RNU6-630P-201ENST00000391258 106 ntBASIC-1.76□□□□□ -2.69
RAB3DO95716 RNU6-168P-201ENST00000516189 101 ntBASIC-1.76□□□□□ -2.69
RAB3DO95716 MIR429-201ENST00000362106 83 ntBASIC-1.77□□□□□ -2.69
RAB3DO95716 MIR630-201ENST00000384957 97 ntBASIC-1.77□□□□□ -2.69
RAB3DO95716 HLA-S-202ENST00000425174 53 ntBASIC-1.77□□□□□ -2.69
RAB3DO95716 RNU6-640P-201ENST00000363693 105 ntBASIC-1.78□□□□□ -2.69
RAB3DO95716 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.78□□□□□ -2.69
RAB3DO95716 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.78□□□□□ -2.69
RAB3DO95716 MIR4520-1-201ENST00000582609 70 ntBASIC-1.78□□□□□ -2.69
RAB3DO95716 MIR6502-201ENST00000617296 76 ntBASIC-1.78□□□□□ -2.69
RAB3DO95716 U2.18-201ENST00000622185 84 ntBASIC-1.78□□□□□ -2.69
RAB3DO95716 AC006160.2-201ENST00000637708 154 ntBASIC-1.78□□□□□ -2.69
RAB3DO95716 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.79□□□□□ -2.7
RAB3DO95716 RNU6-675P-201ENST00000384236 104 ntBASIC-1.79□□□□□ -2.7
RAB3DO95716 MTND4LP1-201ENST00000446263 157 ntBASIC-1.79□□□□□ -2.7
RAB3DO95716 RNU6-608P-201ENST00000383927 104 ntBASIC-1.8□□□□□ -2.7
RAB3DO95716 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.8□□□□□ -2.7
RAB3DO95716 MIR520D-201ENST00000385002 87 ntBASIC-1.8□□□□□ -2.7
RAB3DO95716 MIR4770-201ENST00000579149 58 ntBASIC-1.8□□□□□ -2.7
RAB3DO95716 MIR1297-201ENST00000637311 77 ntBASIC-1.8□□□□□ -2.7
RAB3DO95716 RNU6-755P-201ENST00000364400 103 ntBASIC-1.81□□□□□ -2.7
RAB3DO95716 AC018880.2-201ENST00000414265 201 ntBASIC-1.81□□□□□ -2.7
RAB3DO95716 RNA5SP180-201ENST00000516181 101 ntBASIC-1.81□□□□□ -2.7
RAB3DO95716 RNU6-844P-201ENST00000517175 102 ntBASIC-1.81□□□□□ -2.7
RAB3DO95716 SNORD113.1-201ENST00000363280 73 ntBASIC-1.82□□□□□ -2.7
RAB3DO95716 RNU6-226P-201ENST00000363778 107 ntBASIC-1.82□□□□□ -2.7
RAB3DO95716 RNU6-668P-201ENST00000364180 107 ntBASIC-1.82□□□□□ -2.7
RAB3DO95716 MIR5591-201ENST00000578248 65 ntBASIC-1.82□□□□□ -2.7
RAB3DO95716 MIR664A-201ENST00000626086 82 ntBASIC-1.82□□□□□ -2.7
RAB3DO95716 SNORA63.4-201ENST00000362763 126 ntBASIC-1.83□□□□□ -2.7
RAB3DO95716 RNU6-32P-201ENST00000383948 107 ntBASIC-1.83□□□□□ -2.7
RAB3DO95716 RNU6-13P-201ENST00000384248 107 ntBASIC-1.83□□□□□ -2.7
RAB3DO95716 RNU6-12P-201ENST00000384604 107 ntBASIC-1.83□□□□□ -2.7
RAB3DO95716 RNU6-41P-201ENST00000384741 107 ntBASIC-1.83□□□□□ -2.7
RAB3DO95716 SNORD113-2-201ENST00000391082 72 ntBASIC-1.83□□□□□ -2.7
RAB3DO95716 MIR3910-1-201ENST00000580936 111 ntBASIC-1.83□□□□□ -2.7
RAB3DO95716 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.84□□□□□ -2.7
RAB3DO95716 SNORD45A-201ENST00000384512 84 ntBASIC-1.84□□□□□ -2.7
RAB3DO95716 RNA5SP215-201ENST00000363440 122 ntBASIC-1.85□□□□□ -2.71
RAB3DO95716 RNU6-147P-201ENST00000383983 107 ntBASIC-1.85□□□□□ -2.71
RAB3DO95716 RNU6-380P-201ENST00000410207 107 ntBASIC-1.85□□□□□ -2.71
RAB3DO95716 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 229 ms