Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNU6-945P-201ENST00000383947 107 ntBASIC0.99□□□□□ -2.25
RNF40O75150 RNU6-974P-201ENST00000384099 108 ntBASIC0.99□□□□□ -2.25
RNF40O75150 MIR29B1-201ENST00000385015 81 ntBASIC0.99□□□□□ -2.25
RNF40O75150 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.99□□□□□ -2.25
RNF40O75150 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
RNF40O75150 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
RNF40O75150 MIR5000-201ENST00000577717 103 ntBASIC0.98□□□□□ -2.25
RNF40O75150 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
RNF40O75150 snoR1.1-201ENST00000628177 80 ntBASIC0.98□□□□□ -2.25
RNF40O75150 SNORD44.1-201ENST00000363202 61 ntBASIC0.97□□□□□ -2.25
RNF40O75150 RNU7-88P-201ENST00000458752 63 ntBASIC0.97□□□□□ -2.25
RNF40O75150 RNU7-129P-201ENST00000516128 62 ntBASIC0.97□□□□□ -2.25
RNF40O75150 CYP3A137P-201ENST00000562436 69 ntBASIC0.97□□□□□ -2.25
RNF40O75150 SNORD63.1-201ENST00000516178 80 ntBASIC0.96□□□□□ -2.26
RNF40O75150 AL391099.1-201ENST00000624635 187 ntBASIC0.96□□□□□ -2.26
RNF40O75150 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
RNF40O75150 RNU6-973P-201ENST00000364690 107 ntBASIC0.94□□□□□ -2.26
RNF40O75150 SNORA62.4-201ENST00000365504 151 ntBASIC0.94□□□□□ -2.26
RNF40O75150 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
RNF40O75150 RNU6-724P-201ENST00000390958 105 ntBASIC0.94□□□□□ -2.26
RNF40O75150 PSMC1P5-201ENST00000512850 177 ntBASIC0.94□□□□□ -2.26
RNF40O75150 AC096531.1-201ENST00000419107 107 ntBASIC0.93□□□□□ -2.26
RNF40O75150 RNU6-1204P-201ENST00000363948 107 ntBASIC0.92□□□□□ -2.26
RNF40O75150 AC108740.1-201ENST00000498629 225 ntBASIC0.92□□□□□ -2.26
RNF40O75150 MIR3170-201ENST00000582699 77 ntBASIC0.92□□□□□ -2.26
RNF40O75150 uc_338.17-201ENST00000619633 179 ntBASIC0.92□□□□□ -2.26
RNF40O75150 RNA5SP325-201ENST00000363756 130 ntBASIC0.91□□□□□ -2.26
RNF40O75150 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
RNF40O75150 MIR548H4-201ENST00000408689 111 ntBASIC0.91□□□□□ -2.26
RNF40O75150 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
RNF40O75150 AC104408.1-201ENST00000605241 170 ntBASIC0.9□□□□□ -2.27
RNF40O75150 RNU6-127P-201ENST00000390897 107 ntBASIC0.89□□□□□ -2.27
RNF40O75150 Y_RNA.613-201ENST00000410726 97 ntBASIC0.89□□□□□ -2.27
RNF40O75150 MIR4714-201ENST00000580728 77 ntBASIC0.88□□□□□ -2.27
RNF40O75150 uc_338.36-201ENST00000622331 158 ntBASIC0.88□□□□□ -2.27
RNF40O75150 SNORD45.2-201ENST00000363552 72 ntBASIC0.87□□□□□ -2.27
RNF40O75150 RNU6-900P-201ENST00000384498 102 ntBASIC0.87□□□□□ -2.27
RNF40O75150 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.87□□□□□ -2.27
RNF40O75150 SNORA68.3-201ENST00000515906 83 ntBASIC0.87□□□□□ -2.27
RNF40O75150 SNORD63.2-201ENST00000516303 64 ntBASIC0.87□□□□□ -2.27
RNF40O75150 RN7SL793P-201ENST00000583259 296 ntBASIC0.87□□□□□ -2.27
RNF40O75150 MIR103A1-201ENST00000362165 78 ntBASIC0.86□□□□□ -2.27
RNF40O75150 RNU6-742P-201ENST00000365289 107 ntBASIC0.86□□□□□ -2.27
RNF40O75150 MIR216A-201ENST00000385063 110 ntBASIC0.86□□□□□ -2.27
RNF40O75150 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
RNF40O75150 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.86□□□□□ -2.27
RNF40O75150 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RNF40O75150 MIR548H2-201ENST00000408874 88 ntBASIC0.85□□□□□ -2.27
RNF40O75150 RNU6-1133P-201ENST00000410963 100 ntBASIC0.85□□□□□ -2.27
RNF40O75150 RNU6-732P-201ENST00000516033 103 ntBASIC0.85□□□□□ -2.27
RNF40O75150 RNU6-822P-201ENST00000362707 106 ntBASIC0.84□□□□□ -2.27
RNF40O75150 RNU6-721P-201ENST00000410155 105 ntBASIC0.83□□□□□ -2.28
RNF40O75150 Y_RNA.321-201ENST00000365149 102 ntBASIC0.82□□□□□ -2.28
RNF40O75150 RNU6-59P-201ENST00000384787 107 ntBASIC0.82□□□□□ -2.28
RNF40O75150 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
RNF40O75150 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
RNF40O75150 MIR6514-201ENST00000622549 70 ntBASIC0.82□□□□□ -2.28
RNF40O75150 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.81□□□□□ -2.28
RNF40O75150 RNU6-1238P-201ENST00000517215 102 ntBASIC0.81□□□□□ -2.28
RNF40O75150 MIR5704-201ENST00000584029 77 ntBASIC0.81□□□□□ -2.28
RNF40O75150 MIR8068-201ENST00000618032 68 ntBASIC0.81□□□□□ -2.28
RNF40O75150 SNORA42.1-201ENST00000363515 137 ntBASIC0.8□□□□□ -2.28
RNF40O75150 RNU6-258P-201ENST00000390884 101 ntBASIC0.8□□□□□ -2.28
RNF40O75150 CR383656.4-201ENST00000546909 122 ntBASIC0.8□□□□□ -2.28
RNF40O75150 MIR6507-201ENST00000613630 70 ntBASIC0.8□□□□□ -2.28
RNF40O75150 MIRLET7D-201ENST00000362263 87 ntBASIC0.79□□□□□ -2.28
RNF40O75150 RNU6-815P-201ENST00000384080 113 ntBASIC0.79□□□□□ -2.28
RNF40O75150 RNU6-455P-201ENST00000384681 107 ntBASIC0.79□□□□□ -2.28
RNF40O75150 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
RNF40O75150 MIR148A-201ENST00000362215 68 ntBASIC0.78□□□□□ -2.28
RNF40O75150 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
RNF40O75150 MIR520D-201ENST00000385002 87 ntBASIC0.78□□□□□ -2.28
RNF40O75150 RNU6-1111P-201ENST00000391118 107 ntBASIC0.78□□□□□ -2.28
RNF40O75150 RNU6-530P-201ENST00000391180 107 ntBASIC0.78□□□□□ -2.28
RNF40O75150 MIR6513-201ENST00000621188 64 ntBASIC0.78□□□□□ -2.28
RNF40O75150 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.77□□□□□ -2.29
RNF40O75150 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
RNF40O75150 RNU6-1008P-201ENST00000384160 104 ntBASIC0.76□□□□□ -2.29
RNF40O75150 RNU6-180P-201ENST00000516697 61 ntBASIC0.76□□□□□ -2.29
RNF40O75150 U6.103-201ENST00000637085 61 ntBASIC0.76□□□□□ -2.29
RNF40O75150 SNORD56B-201ENST00000384713 71 ntBASIC0.74□□□□□ -2.29
RNF40O75150 SNORD19-201ENST00000391191 68 ntBASIC0.74□□□□□ -2.29
RNF40O75150 MIR6854-201ENST00000614935 69 ntBASIC0.74□□□□□ -2.29
RNF40O75150 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
RNF40O75150 MIR643-201ENST00000385267 97 ntBASIC0.73□□□□□ -2.29
RNF40O75150 MIR936-201ENST00000401264 98 ntBASIC0.73□□□□□ -2.29
RNF40O75150 MIR1468-201ENST00000410600 86 ntBASIC0.73□□□□□ -2.29
RNF40O75150 MIR193B-201ENST00000384907 83 ntBASIC0.72□□□□□ -2.29
RNF40O75150 AC114755.3-201ENST00000481111 251 ntBASIC0.72□□□□□ -2.29
RNF40O75150 AC069113.3-201ENST00000521019 150 ntBASIC0.72□□□□□ -2.29
RNF40O75150 RNA5SP163-201ENST00000410304 99 ntBASIC0.7□□□□□ -2.3
RNF40O75150 RNA5SP62-201ENST00000363457 110 ntBASIC0.69□□□□□ -2.3
RNF40O75150 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
RNF40O75150 SNORD114-23-201ENST00000363536 72 ntBASIC0.68□□□□□ -2.3
RNF40O75150 AC244250.2-201ENST00000418731 148 ntBASIC0.68□□□□□ -2.3
RNF40O75150 MIR1273G-201ENST00000577677 100 ntBASIC0.68□□□□□ -2.3
RNF40O75150 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.68□□□□□ -2.3
RNF40O75150 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
RNF40O75150 RNU6-1233P-201ENST00000362922 102 ntBASIC0.67□□□□□ -2.3
RNF40O75150 SNORA27.2-201ENST00000363365 126 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms