Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 U7.5-201ENST00000517224 61 ntBASIC1.39□□□□□ -2.19
VPS9D1Q9Y2B5 MIR8070-201ENST00000616510 88 ntBASIC1.39□□□□□ -2.19
VPS9D1Q9Y2B5 TRMT112P2-201ENST00000512910 132 ntBASIC1.38□□□□□ -2.19
VPS9D1Q9Y2B5 Y_RNA.698-201ENST00000516798 118 ntBASIC1.38□□□□□ -2.19
VPS9D1Q9Y2B5 SNORA25.18-201ENST00000607153 114 ntBASIC1.38□□□□□ -2.19
VPS9D1Q9Y2B5 Y_RNA.423-201ENST00000384057 113 ntBASIC1.37□□□□□ -2.19
VPS9D1Q9Y2B5 RNU6-59P-201ENST00000384787 107 ntBASIC1.37□□□□□ -2.19
VPS9D1Q9Y2B5 RNU7-88P-201ENST00000458752 63 ntBASIC1.37□□□□□ -2.19
VPS9D1Q9Y2B5 RNU6-1232P-201ENST00000516299 86 ntBASIC1.37□□□□□ -2.19
VPS9D1Q9Y2B5 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
VPS9D1Q9Y2B5 SNORA36.2-201ENST00000384004 127 ntBASIC1.36□□□□□ -2.19
VPS9D1Q9Y2B5 MIR1287-201ENST00000408492 90 ntBASIC1.36□□□□□ -2.19
VPS9D1Q9Y2B5 AC098934.3-201ENST00000430450 190 ntBASIC1.36□□□□□ -2.19
VPS9D1Q9Y2B5 SNORD63.1-201ENST00000516178 80 ntBASIC1.36□□□□□ -2.19
VPS9D1Q9Y2B5 snoR1.1-201ENST00000628177 80 ntBASIC1.36□□□□□ -2.19
VPS9D1Q9Y2B5 SNORD118-201ENST00000363593 134 ntBASIC1.35□□□□□ -2.19
VPS9D1Q9Y2B5 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
VPS9D1Q9Y2B5 RNU6-1174P-201ENST00000517278 101 ntBASIC1.35□□□□□ -2.19
VPS9D1Q9Y2B5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
VPS9D1Q9Y2B5 MIR501-201ENST00000390204 84 ntBASIC1.34□□□□□ -2.19
VPS9D1Q9Y2B5 MIR548H4-201ENST00000408689 111 ntBASIC1.34□□□□□ -2.19
VPS9D1Q9Y2B5 ACA64.5-201ENST00000516207 127 ntBASIC1.34□□□□□ -2.19
VPS9D1Q9Y2B5 SNORD63.2-201ENST00000516303 64 ntBASIC1.34□□□□□ -2.19
VPS9D1Q9Y2B5 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
VPS9D1Q9Y2B5 AL353765.1-201ENST00000605514 183 ntBASIC1.34□□□□□ -2.19
VPS9D1Q9Y2B5 RN7SL660P-201ENST00000614852 299 ntBASIC1.34□□□□□ -2.19
VPS9D1Q9Y2B5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
VPS9D1Q9Y2B5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.33□□□□□ -2.2
VPS9D1Q9Y2B5 AP000676.1-201ENST00000533307 52 ntBASIC1.33□□□□□ -2.2
VPS9D1Q9Y2B5 MTRNR2L9-201ENST00000622562 75 ntBASIC1.33□□□□□ -2.2
VPS9D1Q9Y2B5 MIR140-201ENST00000385282 100 ntBASIC1.32□□□□□ -2.2
VPS9D1Q9Y2B5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
VPS9D1Q9Y2B5 Y_RNA.321-201ENST00000365149 102 ntBASIC1.31□□□□□ -2.2
VPS9D1Q9Y2B5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
VPS9D1Q9Y2B5 RNU6-530P-201ENST00000391180 107 ntBASIC1.31□□□□□ -2.2
VPS9D1Q9Y2B5 SNORA40.8-201ENST00000411034 126 ntBASIC1.31□□□□□ -2.2
VPS9D1Q9Y2B5 RNU6-848P-201ENST00000515948 107 ntBASIC1.3□□□□□ -2.2
VPS9D1Q9Y2B5 RNU6-617P-201ENST00000516147 107 ntBASIC1.3□□□□□ -2.2
VPS9D1Q9Y2B5 RNU6-473P-201ENST00000516164 107 ntBASIC1.3□□□□□ -2.2
VPS9D1Q9Y2B5 RNU6-1049P-201ENST00000516414 107 ntBASIC1.3□□□□□ -2.2
VPS9D1Q9Y2B5 RNU6-1223P-201ENST00000517124 104 ntBASIC1.3□□□□□ -2.2
VPS9D1Q9Y2B5 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
VPS9D1Q9Y2B5 MIR3170-201ENST00000582699 77 ntBASIC1.3□□□□□ -2.2
VPS9D1Q9Y2B5 MIR7111-201ENST00000619751 72 ntBASIC1.3□□□□□ -2.2
VPS9D1Q9Y2B5 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
VPS9D1Q9Y2B5 AC138207.3-201ENST00000585289 166 ntBASIC1.29□□□□□ -2.2
VPS9D1Q9Y2B5 MIR6888-201ENST00000621977 67 ntBASIC1.29□□□□□ -2.2
VPS9D1Q9Y2B5 RNU6-392P-201ENST00000364926 101 ntBASIC1.28□□□□□ -2.2
VPS9D1Q9Y2B5 SNORD71-201ENST00000411292 86 ntBASIC1.28□□□□□ -2.2
VPS9D1Q9Y2B5 MIR4464-201ENST00000580818 92 ntBASIC1.28□□□□□ -2.2
VPS9D1Q9Y2B5 MIR499A-201ENST00000384903 122 ntBASIC1.27□□□□□ -2.21
VPS9D1Q9Y2B5 RNU6-894P-201ENST00000517094 105 ntBASIC1.27□□□□□ -2.21
VPS9D1Q9Y2B5 SNORA62.4-201ENST00000365504 151 ntBASIC1.26□□□□□ -2.21
VPS9D1Q9Y2B5 MIR106A-201ENST00000384870 81 ntBASIC1.26□□□□□ -2.21
VPS9D1Q9Y2B5 MIR876-201ENST00000401147 81 ntBASIC1.26□□□□□ -2.21
VPS9D1Q9Y2B5 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
VPS9D1Q9Y2B5 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
VPS9D1Q9Y2B5 AL445584.3-201ENST00000617173 78 ntBASIC1.26□□□□□ -2.21
VPS9D1Q9Y2B5 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
VPS9D1Q9Y2B5 MIR760-201ENST00000390220 80 ntBASIC1.25□□□□□ -2.21
VPS9D1Q9Y2B5 MIR6755-201ENST00000619993 66 ntBASIC1.25□□□□□ -2.21
VPS9D1Q9Y2B5 RNU6-1111P-201ENST00000391118 107 ntBASIC1.24□□□□□ -2.21
VPS9D1Q9Y2B5 MIR1276-201ENST00000408707 83 ntBASIC1.24□□□□□ -2.21
VPS9D1Q9Y2B5 MIR3925-201ENST00000584674 77 ntBASIC1.24□□□□□ -2.21
VPS9D1Q9Y2B5 AC104408.1-201ENST00000605241 170 ntBASIC1.23□□□□□ -2.21
VPS9D1Q9Y2B5 MIR518A1-201ENST00000385068 85 ntBASIC1.22□□□□□ -2.21
VPS9D1Q9Y2B5 RNU6-1326P-201ENST00000391262 107 ntBASIC1.22□□□□□ -2.21
VPS9D1Q9Y2B5 Y_RNA.613-201ENST00000410726 97 ntBASIC1.22□□□□□ -2.21
VPS9D1Q9Y2B5 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
VPS9D1Q9Y2B5 MIR4317-201ENST00000637586 65 ntBASIC1.22□□□□□ -2.21
VPS9D1Q9Y2B5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
VPS9D1Q9Y2B5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
VPS9D1Q9Y2B5 RNU6-1133P-201ENST00000410963 100 ntBASIC1.21□□□□□ -2.22
VPS9D1Q9Y2B5 RNU4-54P-201ENST00000516428 129 ntBASIC1.21□□□□□ -2.22
VPS9D1Q9Y2B5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.2□□□□□ -2.22
VPS9D1Q9Y2B5 RNA5SP128-201ENST00000365305 116 ntBASIC1.2□□□□□ -2.22
VPS9D1Q9Y2B5 Y_RNA.355-201ENST00000365462 98 ntBASIC1.2□□□□□ -2.22
VPS9D1Q9Y2B5 RNA5SP102-201ENST00000516865 106 ntBASIC1.2□□□□□ -2.22
VPS9D1Q9Y2B5 AL391099.1-201ENST00000624635 187 ntBASIC1.2□□□□□ -2.22
VPS9D1Q9Y2B5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VPS9D1Q9Y2B5 MIR96-201ENST00000362288 78 ntBASIC1.19□□□□□ -2.22
VPS9D1Q9Y2B5 MIR1468-201ENST00000410600 86 ntBASIC1.19□□□□□ -2.22
VPS9D1Q9Y2B5 RNA5SP98-201ENST00000363158 137 ntBASIC1.18□□□□□ -2.22
VPS9D1Q9Y2B5 Y_RNA.345-201ENST00000365384 92 ntBASIC1.18□□□□□ -2.22
VPS9D1Q9Y2B5 uc_338.36-201ENST00000622331 158 ntBASIC1.18□□□□□ -2.22
VPS9D1Q9Y2B5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VPS9D1Q9Y2B5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
VPS9D1Q9Y2B5 SCARNA11.2-201ENST00000517183 154 ntBASIC1.17□□□□□ -2.22
VPS9D1Q9Y2B5 MIR4661-201ENST00000582720 75 ntBASIC1.17□□□□□ -2.22
VPS9D1Q9Y2B5 MIR6504-201ENST00000613520 61 ntBASIC1.17□□□□□ -2.22
VPS9D1Q9Y2B5 MIR499B-201ENST00000636498 73 ntBASIC1.17□□□□□ -2.22
VPS9D1Q9Y2B5 RNU6-1238P-201ENST00000517215 102 ntBASIC1.16□□□□□ -2.22
VPS9D1Q9Y2B5 MIR6507-201ENST00000613630 70 ntBASIC1.16□□□□□ -2.22
VPS9D1Q9Y2B5 SNORD114-27-201ENST00000363766 70 ntBASIC1.15□□□□□ -2.23
VPS9D1Q9Y2B5 MIR489-201ENST00000384923 84 ntBASIC1.15□□□□□ -2.23
VPS9D1Q9Y2B5 SNORD114-22-201ENST00000365423 72 ntBASIC1.14□□□□□ -2.23
VPS9D1Q9Y2B5 RNU7-129P-201ENST00000516128 62 ntBASIC1.14□□□□□ -2.23
VPS9D1Q9Y2B5 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
VPS9D1Q9Y2B5 Y_RNA.206-201ENST00000364136 102 ntBASIC1.13□□□□□ -2.23
VPS9D1Q9Y2B5 RNU6-1047P-201ENST00000364418 107 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms