Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 SNORD115-27-201ENST00000364430 82 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 RNU6-24P-201ENST00000384440 107 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 MIR519C-201ENST00000385053 87 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 MIR1255B2-201ENST00000408618 67 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 CYP3A54P-201ENST00000566950 75 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 MIR4306-201ENST00000583390 91 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.83□□□□□ -2.54
FOXA2Q9Y261 RNU6-479P-201ENST00000516348 105 ntBASIC-0.83□□□□□ -2.54
FOXA2Q9Y261 RNU6-752P-201ENST00000516376 102 ntBASIC-0.83□□□□□ -2.54
FOXA2Q9Y261 MIR4464-201ENST00000580818 92 ntBASIC-0.83□□□□□ -2.54
FOXA2Q9Y261 MIR2052-201ENST00000636055 55 ntBASIC-0.83□□□□□ -2.54
FOXA2Q9Y261 RNU6-340P-201ENST00000364005 107 ntBASIC-0.84□□□□□ -2.54
FOXA2Q9Y261 SNORD114-15-201ENST00000364687 72 ntBASIC-0.84□□□□□ -2.54
FOXA2Q9Y261 RNU6-10P-201ENST00000384036 107 ntBASIC-0.84□□□□□ -2.54
FOXA2Q9Y261 MIR521-2-201ENST00000384818 87 ntBASIC-0.84□□□□□ -2.54
FOXA2Q9Y261 RNU2-51P-201ENST00000410708 197 ntBASIC-0.84□□□□□ -2.54
FOXA2Q9Y261 RNU6-681P-201ENST00000364012 104 ntBASIC-0.85□□□□□ -2.55
FOXA2Q9Y261 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
FOXA2Q9Y261 AL031737.1-201ENST00000450125 223 ntBASIC-0.85□□□□□ -2.55
FOXA2Q9Y261 RNU6-313P-201ENST00000516317 112 ntBASIC-0.85□□□□□ -2.55
FOXA2Q9Y261 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
FOXA2Q9Y261 SNORD114-17-201ENST00000364699 75 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 SNORD77.2-201ENST00000391045 68 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 AL445584.3-201ENST00000617173 78 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 MIR6888-201ENST00000621977 67 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 MIR6739-201ENST00000622461 75 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 RNU6-633P-201ENST00000362612 103 ntBASIC-0.87□□□□□ -2.55
FOXA2Q9Y261 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.87□□□□□ -2.55
FOXA2Q9Y261 RNY1P9-201ENST00000532431 109 ntBASIC-0.87□□□□□ -2.55
FOXA2Q9Y261 AC132825.6-201ENST00000638861 357 ntBASIC-0.87□□□□□ -2.55
FOXA2Q9Y261 MIR450A1-201ENST00000362262 91 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 SNORD115-37-201ENST00000363768 82 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 RNA5SP192-201ENST00000364404 120 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 snoU13.19-201ENST00000459148 104 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 MIR4668-201ENST00000582284 70 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.89□□□□□ -2.55
FOXA2Q9Y261 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.89□□□□□ -2.55
FOXA2Q9Y261 RNU6-30P-201ENST00000384561 107 ntBASIC-0.89□□□□□ -2.55
FOXA2Q9Y261 MIR889-201ENST00000401280 79 ntBASIC-0.89□□□□□ -2.55
FOXA2Q9Y261 MIR3910-1-201ENST00000580936 111 ntBASIC-0.89□□□□□ -2.55
FOXA2Q9Y261 RNU6-226P-201ENST00000363778 107 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 RNA5SP461-201ENST00000516451 104 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 MIR548AX-201ENST00000580117 73 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 AP001318.4-201ENST00000616637 121 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 RNU6-924P-201ENST00000362926 108 ntBASIC-0.91□□□□□ -2.56
FOXA2Q9Y261 RNY4P18-201ENST00000391107 89 ntBASIC-0.91□□□□□ -2.56
FOXA2Q9Y261 AL035461.1-201ENST00000421490 332 ntBASIC-0.91□□□□□ -2.56
FOXA2Q9Y261 RNU7-154P-201ENST00000516194 62 ntBASIC-0.91□□□□□ -2.56
FOXA2Q9Y261 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.91□□□□□ -2.56
FOXA2Q9Y261 RNU6-624P-201ENST00000363411 107 ntBASIC-0.92□□□□□ -2.56
FOXA2Q9Y261 SNORD116-22-201ENST00000384430 92 ntBASIC-0.92□□□□□ -2.56
FOXA2Q9Y261 MIR519A2-201ENST00000384990 87 ntBASIC-0.92□□□□□ -2.56
FOXA2Q9Y261 AC093729.1-201ENST00000513074 128 ntBASIC-0.92□□□□□ -2.56
FOXA2Q9Y261 SNORA40.13-201ENST00000516379 120 ntBASIC-0.92□□□□□ -2.56
FOXA2Q9Y261 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.93□□□□□ -2.56
FOXA2Q9Y261 MIR587-201ENST00000384845 96 ntBASIC-0.93□□□□□ -2.56
FOXA2Q9Y261 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.93□□□□□ -2.56
FOXA2Q9Y261 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.93□□□□□ -2.56
FOXA2Q9Y261 snoU83B.1-201ENST00000517136 88 ntBASIC-0.93□□□□□ -2.56
FOXA2Q9Y261 RNA5SP26-201ENST00000362406 119 ntBASIC-0.94□□□□□ -2.56
FOXA2Q9Y261 RNU6-518P-201ENST00000516056 96 ntBASIC-0.94□□□□□ -2.56
FOXA2Q9Y261 MALAT1.1-201ENST00000618249 95 ntBASIC-0.94□□□□□ -2.56
FOXA2Q9Y261 MIR6818-201ENST00000621576 65 ntBASIC-0.94□□□□□ -2.56
FOXA2Q9Y261 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.94□□□□□ -2.56
FOXA2Q9Y261 SNORD113-1-201ENST00000365321 69 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 AL021921.1-201ENST00000442774 93 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 SNORD63.1-201ENST00000516178 80 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 RNU6-656P-201ENST00000516785 107 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 RNU6-706P-201ENST00000517229 104 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 MIR6502-201ENST00000617296 76 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 SNORD115-22-201ENST00000364456 82 ntBASIC-0.96□□□□□ -2.56
FOXA2Q9Y261 RNU6-219P-201ENST00000364728 107 ntBASIC-0.96□□□□□ -2.56
FOXA2Q9Y261 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.96□□□□□ -2.56
FOXA2Q9Y261 RNU6-755P-201ENST00000364400 103 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 RNU6-402P-201ENST00000410678 103 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 RNA5SP476-201ENST00000516613 103 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 MIR5591-201ENST00000578248 65 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 AC091912.2-201ENST00000624798 167 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 MIR6874-201ENST00000635894 71 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 MIR29B1-201ENST00000385015 81 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 SNORD57-201ENST00000448188 72 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 RNA5SP67-201ENST00000516422 131 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 RNU6-267P-201ENST00000516714 103 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 RNU6-557P-201ENST00000516842 110 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 AP002795.1-201ENST00000534879 84 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 MIR3165-201ENST00000579874 75 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 MIR548BB-201ENST00000626714 66 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 RNU6-497P-201ENST00000365316 104 ntBASIC-0.99□□□□□ -2.57
FOXA2Q9Y261 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.99□□□□□ -2.57
FOXA2Q9Y261 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 282.8 ms