Protein–RNA interactions for Protein: Q9UPE1

SRPK3, SRSF protein kinase 3, humanhuman

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3Q9UPE1 RNU6-1022P-201ENST00000365049 104 ntBASIC0.41□□□□□ -2.34
SRPK3Q9UPE1 Y_RNA.468-201ENST00000384298 102 ntBASIC0.41□□□□□ -2.34
SRPK3Q9UPE1 Y_RNA.514-201ENST00000384528 112 ntBASIC0.41□□□□□ -2.34
SRPK3Q9UPE1 RNU7-188P-201ENST00000517063 64 ntBASIC0.41□□□□□ -2.34
SRPK3Q9UPE1 MIR6718-201ENST00000616153 80 ntBASIC0.41□□□□□ -2.34
SRPK3Q9UPE1 MIR198-201ENST00000637333 62 ntBASIC0.41□□□□□ -2.34
SRPK3Q9UPE1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SRPK3Q9UPE1 RNU6-411P-201ENST00000384451 107 ntBASIC0.4□□□□□ -2.35
SRPK3Q9UPE1 AC244090.1-201ENST00000441884 93 ntBASIC0.4□□□□□ -2.35
SRPK3Q9UPE1 RNU6-46P-201ENST00000383860 107 ntBASIC0.39□□□□□ -2.35
SRPK3Q9UPE1 AC021146.9-201ENST00000512503 156 ntBASIC0.39□□□□□ -2.35
SRPK3Q9UPE1 RNA5SP147-201ENST00000516493 109 ntBASIC0.39□□□□□ -2.35
SRPK3Q9UPE1 AC069113.3-201ENST00000521019 150 ntBASIC0.39□□□□□ -2.35
SRPK3Q9UPE1 SNORD45.1-201ENST00000363181 77 ntBASIC0.38□□□□□ -2.35
SRPK3Q9UPE1 SNORA63.6-201ENST00000364921 119 ntBASIC0.38□□□□□ -2.35
SRPK3Q9UPE1 MIR582-201ENST00000365731 98 ntBASIC0.38□□□□□ -2.35
SRPK3Q9UPE1 RNU6-127P-201ENST00000390897 107 ntBASIC0.38□□□□□ -2.35
SRPK3Q9UPE1 RNU6-604P-201ENST00000390917 100 ntBASIC0.38□□□□□ -2.35
SRPK3Q9UPE1 MIR548E-201ENST00000408287 88 ntBASIC0.38□□□□□ -2.35
SRPK3Q9UPE1 MIR101-1-201ENST00000362265 75 ntBASIC0.37□□□□□ -2.35
SRPK3Q9UPE1 Y_RNA.250-201ENST00000364542 110 ntBASIC0.37□□□□□ -2.35
SRPK3Q9UPE1 RNU6-1241P-201ENST00000384536 107 ntBASIC0.37□□□□□ -2.35
SRPK3Q9UPE1 Y_RNA.545-201ENST00000384652 105 ntBASIC0.37□□□□□ -2.35
SRPK3Q9UPE1 SNORA75.1-201ENST00000391130 148 ntBASIC0.37□□□□□ -2.35
SRPK3Q9UPE1 RNU6-587P-201ENST00000391282 106 ntBASIC0.37□□□□□ -2.35
SRPK3Q9UPE1 AC108740.1-201ENST00000498629 225 ntBASIC0.37□□□□□ -2.35
SRPK3Q9UPE1 MIR548AX-201ENST00000580117 73 ntBASIC0.37□□□□□ -2.35
SRPK3Q9UPE1 MIR3925-201ENST00000584674 77 ntBASIC0.37□□□□□ -2.35
SRPK3Q9UPE1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
SRPK3Q9UPE1 MIR154-201ENST00000385243 84 ntBASIC0.36□□□□□ -2.35
SRPK3Q9UPE1 RPS29P8-201ENST00000445109 171 ntBASIC0.36□□□□□ -2.35
SRPK3Q9UPE1 SNORA40.17-201ENST00000517256 115 ntBASIC0.36□□□□□ -2.35
SRPK3Q9UPE1 MIR8053-201ENST00000613344 75 ntBASIC0.36□□□□□ -2.35
SRPK3Q9UPE1 RNU6-1296P-201ENST00000383879 107 ntBASIC0.35□□□□□ -2.35
SRPK3Q9UPE1 MIR876-201ENST00000401147 81 ntBASIC0.35□□□□□ -2.35
SRPK3Q9UPE1 SCARNA11.2-201ENST00000517183 154 ntBASIC0.35□□□□□ -2.35
SRPK3Q9UPE1 snoU13.13-201ENST00000458842 104 ntBASIC0.34□□□□□ -2.36
SRPK3Q9UPE1 RNU6-782P-201ENST00000516852 104 ntBASIC0.34□□□□□ -2.36
SRPK3Q9UPE1 MIR643-201ENST00000385267 97 ntBASIC0.33□□□□□ -2.36
SRPK3Q9UPE1 SNORD2-201ENST00000459163 69 ntBASIC0.33□□□□□ -2.36
SRPK3Q9UPE1 RNU6-1015P-201ENST00000517121 99 ntBASIC0.33□□□□□ -2.36
SRPK3Q9UPE1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.33□□□□□ -2.36
SRPK3Q9UPE1 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
SRPK3Q9UPE1 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
SRPK3Q9UPE1 RNU6-687P-201ENST00000516443 89 ntBASIC0.32□□□□□ -2.36
SRPK3Q9UPE1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.32□□□□□ -2.36
SRPK3Q9UPE1 RNU6-1184P-201ENST00000384588 108 ntBASIC0.31□□□□□ -2.36
SRPK3Q9UPE1 RNU6-175P-201ENST00000516896 107 ntBASIC0.31□□□□□ -2.36
SRPK3Q9UPE1 SNORD115-22-201ENST00000364456 82 ntBASIC0.3□□□□□ -2.36
SRPK3Q9UPE1 RNU6-302P-201ENST00000365249 107 ntBASIC0.3□□□□□ -2.36
SRPK3Q9UPE1 Y_RNA.565-201ENST00000384719 101 ntBASIC0.3□□□□□ -2.36
SRPK3Q9UPE1 RN7SL660P-201ENST00000614852 299 ntBASIC0.3□□□□□ -2.36
SRPK3Q9UPE1 SNORA15B-2-201ENST00000384058 135 ntBASIC0.29□□□□□ -2.36
SRPK3Q9UPE1 SNORA15B-1-201ENST00000384334 135 ntBASIC0.29□□□□□ -2.36
SRPK3Q9UPE1 RNU6-1162P-201ENST00000384443 104 ntBASIC0.29□□□□□ -2.36
SRPK3Q9UPE1 SNORD45A-201ENST00000384512 84 ntBASIC0.29□□□□□ -2.36
SRPK3Q9UPE1 MIR224-201ENST00000384889 81 ntBASIC0.29□□□□□ -2.36
SRPK3Q9UPE1 RNU6-871P-201ENST00000516122 100 ntBASIC0.29□□□□□ -2.36
SRPK3Q9UPE1 MIR6739-201ENST00000622461 75 ntBASIC0.29□□□□□ -2.36
SRPK3Q9UPE1 SNORD114-3-201ENST00000364969 75 ntBASIC0.28□□□□□ -2.36
SRPK3Q9UPE1 RNU6-1036P-201ENST00000383959 104 ntBASIC0.28□□□□□ -2.36
SRPK3Q9UPE1 RNU6-881P-201ENST00000516813 102 ntBASIC0.28□□□□□ -2.36
SRPK3Q9UPE1 RNU6-895P-201ENST00000384125 103 ntBASIC0.27□□□□□ -2.37
SRPK3Q9UPE1 Y_RNA.633-201ENST00000459107 95 ntBASIC0.27□□□□□ -2.37
SRPK3Q9UPE1 RNU6-523P-201ENST00000516304 54 ntBASIC0.27□□□□□ -2.37
SRPK3Q9UPE1 MIR371B-201ENST00000638082 66 ntBASIC0.27□□□□□ -2.37
SRPK3Q9UPE1 RNU6-645P-201ENST00000364649 106 ntBASIC0.26□□□□□ -2.37
SRPK3Q9UPE1 MIR610-201ENST00000385139 96 ntBASIC0.26□□□□□ -2.37
SRPK3Q9UPE1 MIR892B-201ENST00000401279 77 ntBASIC0.26□□□□□ -2.37
SRPK3Q9UPE1 RNU6-634P-201ENST00000459134 106 ntBASIC0.26□□□□□ -2.37
SRPK3Q9UPE1 MIR4320-201ENST00000636981 65 ntBASIC0.26□□□□□ -2.37
SRPK3Q9UPE1 SNORD113.1-201ENST00000363280 73 ntBASIC0.25□□□□□ -2.37
SRPK3Q9UPE1 MIR521-2-201ENST00000384818 87 ntBASIC0.25□□□□□ -2.37
SRPK3Q9UPE1 RNU6-982P-201ENST00000516216 102 ntBASIC0.25□□□□□ -2.37
SRPK3Q9UPE1 SNORD115-31-201ENST00000365318 82 ntBASIC0.24□□□□□ -2.37
SRPK3Q9UPE1 SNORA49-201ENST00000386157 136 ntBASIC0.24□□□□□ -2.37
SRPK3Q9UPE1 MTND4LP1-201ENST00000446263 157 ntBASIC0.24□□□□□ -2.37
SRPK3Q9UPE1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.24□□□□□ -2.37
SRPK3Q9UPE1 AC104408.1-201ENST00000605241 170 ntBASIC0.24□□□□□ -2.37
SRPK3Q9UPE1 MIR6514-201ENST00000622549 70 ntBASIC0.24□□□□□ -2.37
SRPK3Q9UPE1 SNORA42.1-201ENST00000363515 137 ntBASIC0.23□□□□□ -2.37
SRPK3Q9UPE1 MIR106A-201ENST00000384870 81 ntBASIC0.23□□□□□ -2.37
SRPK3Q9UPE1 MIR4768-201ENST00000585270 74 ntBASIC0.23□□□□□ -2.37
SRPK3Q9UPE1 U6.96-201ENST00000636425 70 ntBASIC0.23□□□□□ -2.37
SRPK3Q9UPE1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.22□□□□□ -2.37
SRPK3Q9UPE1 SNORA33.1-201ENST00000364957 130 ntBASIC0.22□□□□□ -2.37
SRPK3Q9UPE1 RNA5SP163-201ENST00000410304 99 ntBASIC0.22□□□□□ -2.37
SRPK3Q9UPE1 MIR593-201ENST00000384856 100 ntBASIC0.21□□□□□ -2.38
SRPK3Q9UPE1 MIR548H2-201ENST00000408874 88 ntBASIC0.21□□□□□ -2.38
SRPK3Q9UPE1 Y_RNA.684-201ENST00000516510 99 ntBASIC0.21□□□□□ -2.38
SRPK3Q9UPE1 RNU6-656P-201ENST00000516785 107 ntBASIC0.21□□□□□ -2.38
SRPK3Q9UPE1 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
SRPK3Q9UPE1 SNORD115-25-201ENST00000362619 82 ntBASIC0.2□□□□□ -2.38
SRPK3Q9UPE1 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
SRPK3Q9UPE1 CR383656.4-201ENST00000546909 122 ntBASIC0.2□□□□□ -2.38
SRPK3Q9UPE1 MIR4743-201ENST00000584576 69 ntBASIC0.2□□□□□ -2.38
SRPK3Q9UPE1 RNU6-1216P-201ENST00000362590 107 ntBASIC0.19□□□□□ -2.38
SRPK3Q9UPE1 Y_RNA.583-201ENST00000391033 113 ntBASIC0.19□□□□□ -2.38
SRPK3Q9UPE1 RNA5SP451-201ENST00000410588 110 ntBASIC0.19□□□□□ -2.38
SRPK3Q9UPE1 RNU4-63P-201ENST00000411313 118 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms