Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MIR1297-201ENST00000637311 77 ntBASIC0.05□□□□□ -2.4
CCM2LQ9NUG4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
CCM2LQ9NUG4 RNU6-929P-201ENST00000384429 107 ntBASIC0.04□□□□□ -2.4
CCM2LQ9NUG4 RNU6-180P-201ENST00000516697 61 ntBASIC0.04□□□□□ -2.4
CCM2LQ9NUG4 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
CCM2LQ9NUG4 Y_RNA.788-201ENST00000622394 112 ntBASIC0.04□□□□□ -2.4
CCM2LQ9NUG4 RNA5SP98-201ENST00000363158 137 ntBASIC0.03□□□□□ -2.4
CCM2LQ9NUG4 RNU7-165P-201ENST00000458864 60 ntBASIC0.02□□□□□ -2.41
CCM2LQ9NUG4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.02□□□□□ -2.41
CCM2LQ9NUG4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
CCM2LQ9NUG4 RNU6-604P-201ENST00000390917 100 ntBASIC0.01□□□□□ -2.41
CCM2LQ9NUG4 RNA5SP25-201ENST00000410815 110 ntBASIC0.01□□□□□ -2.41
CCM2LQ9NUG4 Z95118.1-201ENST00000421372 247 ntBASIC0.01□□□□□ -2.41
CCM2LQ9NUG4 RNU6-857P-201ENST00000515893 110 ntBASIC0.01□□□□□ -2.41
CCM2LQ9NUG4 SNORD115-25-201ENST00000362619 82 ntBASIC0□□□□□ -2.41
CCM2LQ9NUG4 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
CCM2LQ9NUG4 SNORD45.1-201ENST00000363181 77 ntBASIC0□□□□□ -2.41
CCM2LQ9NUG4 SNORD114-31-201ENST00000363219 75 ntBASIC0□□□□□ -2.41
CCM2LQ9NUG4 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
CCM2LQ9NUG4 U6.96-201ENST00000636425 70 ntBASIC0□□□□□ -2.41
CCM2LQ9NUG4 SNORA33.1-201ENST00000364957 130 ntBASIC-0.01□□□□□ -2.41
CCM2LQ9NUG4 RNU6-30P-201ENST00000384561 107 ntBASIC-0.01□□□□□ -2.41
CCM2LQ9NUG4 RNU6-758P-201ENST00000516292 89 ntBASIC-0.01□□□□□ -2.41
CCM2LQ9NUG4 IGLVI-20-201ENST00000519296 130 ntBASIC-0.01□□□□□ -2.41
CCM2LQ9NUG4 RNU6-279P-201ENST00000391297 101 ntBASIC-0.02□□□□□ -2.41
CCM2LQ9NUG4 AC104692.1-201ENST00000472406 90 ntBASIC-0.02□□□□□ -2.41
CCM2LQ9NUG4 RNU6-70P-201ENST00000516438 60 ntBASIC-0.02□□□□□ -2.41
CCM2LQ9NUG4 MIR4493-201ENST00000584016 73 ntBASIC-0.02□□□□□ -2.41
CCM2LQ9NUG4 AC145423.2-201ENST00000610631 239 ntBASIC-0.02□□□□□ -2.41
CCM2LQ9NUG4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.02□□□□□ -2.41
CCM2LQ9NUG4 MIR889-201ENST00000401280 79 ntBASIC-0.03□□□□□ -2.41
CCM2LQ9NUG4 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.03□□□□□ -2.41
CCM2LQ9NUG4 MIR3134-201ENST00000579433 74 ntBASIC-0.03□□□□□ -2.41
CCM2LQ9NUG4 AP001180.6-201ENST00000584918 159 ntBASIC-0.03□□□□□ -2.41
CCM2LQ9NUG4 MIR6507-201ENST00000613630 70 ntBASIC-0.03□□□□□ -2.41
CCM2LQ9NUG4 RNA5SP368-201ENST00000364298 116 ntBASIC-0.04□□□□□ -2.42
CCM2LQ9NUG4 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.04□□□□□ -2.42
CCM2LQ9NUG4 RNU6-302P-201ENST00000365249 107 ntBASIC-0.04□□□□□ -2.42
CCM2LQ9NUG4 MIR6773-201ENST00000612812 74 ntBASIC-0.04□□□□□ -2.42
CCM2LQ9NUG4 RNU6-24P-201ENST00000384440 107 ntBASIC-0.05□□□□□ -2.42
CCM2LQ9NUG4 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.05□□□□□ -2.42
CCM2LQ9NUG4 RNU6-455P-201ENST00000384681 107 ntBASIC-0.05□□□□□ -2.42
CCM2LQ9NUG4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
CCM2LQ9NUG4 AC090617.8-201ENST00000623339 167 ntBASIC-0.05□□□□□ -2.42
CCM2LQ9NUG4 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.06□□□□□ -2.42
CCM2LQ9NUG4 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.06□□□□□ -2.42
CCM2LQ9NUG4 AC244250.2-201ENST00000418731 148 ntBASIC-0.06□□□□□ -2.42
CCM2LQ9NUG4 RNU6-982P-201ENST00000516216 102 ntBASIC-0.06□□□□□ -2.42
CCM2LQ9NUG4 uc_338.36-201ENST00000622331 158 ntBASIC-0.06□□□□□ -2.42
CCM2LQ9NUG4 RNU6-502P-201ENST00000362419 108 ntBASIC-0.07□□□□□ -2.42
CCM2LQ9NUG4 RNU6-645P-201ENST00000364649 106 ntBASIC-0.07□□□□□ -2.42
CCM2LQ9NUG4 RNU6-46P-201ENST00000383860 107 ntBASIC-0.07□□□□□ -2.42
CCM2LQ9NUG4 SNORD45A-201ENST00000384512 84 ntBASIC-0.07□□□□□ -2.42
CCM2LQ9NUG4 U7.4-201ENST00000614961 63 ntBASIC-0.07□□□□□ -2.42
CCM2LQ9NUG4 MIR6739-201ENST00000622461 75 ntBASIC-0.07□□□□□ -2.42
CCM2LQ9NUG4 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.08□□□□□ -2.42
CCM2LQ9NUG4 MIR521-2-201ENST00000384818 87 ntBASIC-0.08□□□□□ -2.42
CCM2LQ9NUG4 MIR154-201ENST00000385243 84 ntBASIC-0.08□□□□□ -2.42
CCM2LQ9NUG4 RNU6-337P-201ENST00000391243 106 ntBASIC-0.08□□□□□ -2.42
CCM2LQ9NUG4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.08□□□□□ -2.42
CCM2LQ9NUG4 MIR1295B-201ENST00000636144 60 ntBASIC-0.08□□□□□ -2.42
CCM2LQ9NUG4 SNORD115-22-201ENST00000364456 82 ntBASIC-0.09□□□□□ -2.42
CCM2LQ9NUG4 MIR604-201ENST00000384880 94 ntBASIC-0.09□□□□□ -2.42
CCM2LQ9NUG4 SNORD114-15-201ENST00000364687 72 ntBASIC-0.1□□□□□ -2.43
CCM2LQ9NUG4 SNORD49B-201ENST00000365172 72 ntBASIC-0.1□□□□□ -2.43
CCM2LQ9NUG4 MIR548C-201ENST00000384815 97 ntBASIC-0.1□□□□□ -2.43
CCM2LQ9NUG4 MIR214-201ENST00000385214 110 ntBASIC-0.1□□□□□ -2.43
CCM2LQ9NUG4 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.1□□□□□ -2.43
CCM2LQ9NUG4 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.1□□□□□ -2.43
CCM2LQ9NUG4 RNU6-656P-201ENST00000516785 107 ntBASIC-0.1□□□□□ -2.43
CCM2LQ9NUG4 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.11□□□□□ -2.43
CCM2LQ9NUG4 SNORD114-12-201ENST00000365400 75 ntBASIC-0.11□□□□□ -2.43
CCM2LQ9NUG4 MIR9-2-201ENST00000384838 87 ntBASIC-0.11□□□□□ -2.43
CCM2LQ9NUG4 MIRLET7B-201ENST00000385140 83 ntBASIC-0.11□□□□□ -2.43
CCM2LQ9NUG4 AC108676.2-201ENST00000605225 163 ntBASIC-0.11□□□□□ -2.43
CCM2LQ9NUG4 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.11□□□□□ -2.43
CCM2LQ9NUG4 RNU6-587P-201ENST00000391282 106 ntBASIC-0.12□□□□□ -2.43
CCM2LQ9NUG4 CYP3A54P-201ENST00000566950 75 ntBASIC-0.12□□□□□ -2.43
CCM2LQ9NUG4 MIR8053-201ENST00000613344 75 ntBASIC-0.12□□□□□ -2.43
CCM2LQ9NUG4 RNU6-411P-201ENST00000384451 107 ntBASIC-0.13□□□□□ -2.43
CCM2LQ9NUG4 MIR1255B2-201ENST00000408618 67 ntBASIC-0.13□□□□□ -2.43
CCM2LQ9NUG4 RNU6-881P-201ENST00000516813 102 ntBASIC-0.13□□□□□ -2.43
CCM2LQ9NUG4 MIR101-1-201ENST00000362265 75 ntBASIC-0.14□□□□□ -2.43
CCM2LQ9NUG4 SNORD113.1-201ENST00000363280 73 ntBASIC-0.14□□□□□ -2.43
CCM2LQ9NUG4 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.14□□□□□ -2.43
CCM2LQ9NUG4 MIR4645-201ENST00000583158 77 ntBASIC-0.14□□□□□ -2.43
CCM2LQ9NUG4 MIR655-201ENST00000362159 97 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 SNORD95.1-201ENST00000364099 68 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 RNA5SP331-201ENST00000364986 107 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 SNORD115-31-201ENST00000365318 82 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 RNU6-900P-201ENST00000384498 102 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 RNU6-901P-201ENST00000384593 106 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 AL445193.1-201ENST00000441183 141 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 RNU6-687P-201ENST00000516443 89 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 snoR1.1-201ENST00000628177 80 ntBASIC-0.15□□□□□ -2.43
CCM2LQ9NUG4 RNU6-895P-201ENST00000384125 103 ntBASIC-0.16□□□□□ -2.44
CCM2LQ9NUG4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms