Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 Y_RNA.423-201ENST00000384057 113 ntBASIC1.12□□□□□ -2.23
PRDM9Q9NQV7 MIR518A1-201ENST00000385068 85 ntBASIC1.12□□□□□ -2.23
PRDM9Q9NQV7 AC084368.1-201ENST00000620935 65 ntBASIC1.12□□□□□ -2.23
PRDM9Q9NQV7 MIR608-201ENST00000384820 100 ntBASIC1.11□□□□□ -2.23
PRDM9Q9NQV7 RNA5SP102-201ENST00000516865 106 ntBASIC1.11□□□□□ -2.23
PRDM9Q9NQV7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PRDM9Q9NQV7 RNU6-247P-201ENST00000362636 107 ntBASIC1.1□□□□□ -2.23
PRDM9Q9NQV7 MIR876-201ENST00000401147 81 ntBASIC1.1□□□□□ -2.23
PRDM9Q9NQV7 MIR6755-201ENST00000619993 66 ntBASIC1.1□□□□□ -2.23
PRDM9Q9NQV7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.23
PRDM9Q9NQV7 SNORD115-23-201ENST00000364461 82 ntBASIC1.09□□□□□ -2.23
PRDM9Q9NQV7 RNU6-110P-201ENST00000384508 104 ntBASIC1.09□□□□□ -2.23
PRDM9Q9NQV7 MIR489-201ENST00000384923 84 ntBASIC1.09□□□□□ -2.23
PRDM9Q9NQV7 RNU6-863P-201ENST00000515989 104 ntBASIC1.09□□□□□ -2.23
PRDM9Q9NQV7 MIR4452-201ENST00000583004 71 ntBASIC1.09□□□□□ -2.23
PRDM9Q9NQV7 RNU6-1206P-201ENST00000516339 103 ntBASIC1.08□□□□□ -2.24
PRDM9Q9NQV7 AL353803.5-201ENST00000599815 141 ntBASIC1.08□□□□□ -2.24
PRDM9Q9NQV7 MIR106A-201ENST00000384870 81 ntBASIC1.07□□□□□ -2.24
PRDM9Q9NQV7 MIR760-201ENST00000390220 80 ntBASIC1.07□□□□□ -2.24
PRDM9Q9NQV7 RNU6-1232P-201ENST00000516299 86 ntBASIC1.07□□□□□ -2.24
PRDM9Q9NQV7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
PRDM9Q9NQV7 RNA5SP128-201ENST00000365305 116 ntBASIC1.06□□□□□ -2.24
PRDM9Q9NQV7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PRDM9Q9NQV7 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
PRDM9Q9NQV7 AC098934.3-201ENST00000430450 190 ntBASIC1.05□□□□□ -2.24
PRDM9Q9NQV7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
PRDM9Q9NQV7 RN7SL660P-201ENST00000614852 299 ntBASIC1.05□□□□□ -2.24
PRDM9Q9NQV7 RNU6-598P-201ENST00000364017 105 ntBASIC1.04□□□□□ -2.24
PRDM9Q9NQV7 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
PRDM9Q9NQV7 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
PRDM9Q9NQV7 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
PRDM9Q9NQV7 Y_RNA.69-201ENST00000362885 109 ntBASIC1.03□□□□□ -2.24
PRDM9Q9NQV7 SNORD114-22-201ENST00000365423 72 ntBASIC1.02□□□□□ -2.25
PRDM9Q9NQV7 RNA5SP220-201ENST00000516298 104 ntBASIC1.02□□□□□ -2.25
PRDM9Q9NQV7 RNU4-54P-201ENST00000516428 129 ntBASIC1.02□□□□□ -2.25
PRDM9Q9NQV7 RNU6-42P-201ENST00000384165 107 ntBASIC1.01□□□□□ -2.25
PRDM9Q9NQV7 RNU7-151P-201ENST00000516930 53 ntBASIC1.01□□□□□ -2.25
PRDM9Q9NQV7 MIR548AA1-201ENST00000384971 97 ntBASIC1□□□□□ -2.25
PRDM9Q9NQV7 RNU6-696P-201ENST00000390834 107 ntBASIC1□□□□□ -2.25
PRDM9Q9NQV7 AC108676.2-201ENST00000605225 163 ntBASIC1□□□□□ -2.25
PRDM9Q9NQV7 U2.18-201ENST00000622185 84 ntBASIC1□□□□□ -2.25
PRDM9Q9NQV7 RNU6-828P-201ENST00000364876 107 ntBASIC0.99□□□□□ -2.25
PRDM9Q9NQV7 RNU6-995P-201ENST00000391244 107 ntBASIC0.99□□□□□ -2.25
PRDM9Q9NQV7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.99□□□□□ -2.25
PRDM9Q9NQV7 MIR3925-201ENST00000584674 77 ntBASIC0.99□□□□□ -2.25
PRDM9Q9NQV7 MIR96-201ENST00000362288 78 ntBASIC0.98□□□□□ -2.25
PRDM9Q9NQV7 RNU6-924P-201ENST00000362926 108 ntBASIC0.98□□□□□ -2.25
PRDM9Q9NQV7 RNU1-93P-201ENST00000364704 169 ntBASIC0.98□□□□□ -2.25
PRDM9Q9NQV7 MIR545-201ENST00000385085 106 ntBASIC0.98□□□□□ -2.25
PRDM9Q9NQV7 MIR579-201ENST00000385221 98 ntBASIC0.98□□□□□ -2.25
PRDM9Q9NQV7 MIR125B1-201ENST00000385236 88 ntBASIC0.98□□□□□ -2.25
PRDM9Q9NQV7 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
PRDM9Q9NQV7 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
PRDM9Q9NQV7 MIR329-2-201ENST00000385029 84 ntBASIC0.97□□□□□ -2.25
PRDM9Q9NQV7 snoR1.1-201ENST00000628177 80 ntBASIC0.97□□□□□ -2.25
PRDM9Q9NQV7 RNA5SP98-201ENST00000363158 137 ntBASIC0.96□□□□□ -2.26
PRDM9Q9NQV7 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
PRDM9Q9NQV7 RNU6-1262P-201ENST00000516217 96 ntBASIC0.96□□□□□ -2.26
PRDM9Q9NQV7 AP000676.1-201ENST00000533307 52 ntBASIC0.96□□□□□ -2.26
PRDM9Q9NQV7 MIR4432-201ENST00000581823 84 ntBASIC0.96□□□□□ -2.26
PRDM9Q9NQV7 MIR6734-201ENST00000621166 68 ntBASIC0.96□□□□□ -2.26
PRDM9Q9NQV7 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
PRDM9Q9NQV7 Y_RNA.540-201ENST00000384638 111 ntBASIC0.95□□□□□ -2.26
PRDM9Q9NQV7 AL451105.1-201ENST00000450005 189 ntBASIC0.94□□□□□ -2.26
PRDM9Q9NQV7 Y_RNA.698-201ENST00000516798 118 ntBASIC0.94□□□□□ -2.26
PRDM9Q9NQV7 AC211469.2-201ENST00000605461 205 ntBASIC0.94□□□□□ -2.26
PRDM9Q9NQV7 SNORA62.4-201ENST00000365504 151 ntBASIC0.93□□□□□ -2.26
PRDM9Q9NQV7 SCARNA11.2-201ENST00000517183 154 ntBASIC0.93□□□□□ -2.26
PRDM9Q9NQV7 SNORD57-201ENST00000448188 72 ntBASIC0.92□□□□□ -2.26
PRDM9Q9NQV7 RNU7-129P-201ENST00000516128 62 ntBASIC0.92□□□□□ -2.26
PRDM9Q9NQV7 MIR548AL-201ENST00000578416 97 ntBASIC0.92□□□□□ -2.26
PRDM9Q9NQV7 MIR151B-201ENST00000584249 96 ntBASIC0.92□□□□□ -2.26
PRDM9Q9NQV7 AC022709.1-201ENST00000615967 87 ntBASIC0.92□□□□□ -2.26
PRDM9Q9NQV7 MIR520E-201ENST00000384867 87 ntBASIC0.91□□□□□ -2.26
PRDM9Q9NQV7 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
PRDM9Q9NQV7 MIR6857-201ENST00000613267 93 ntBASIC0.91□□□□□ -2.26
PRDM9Q9NQV7 MIR499B-201ENST00000636498 73 ntBASIC0.91□□□□□ -2.26
PRDM9Q9NQV7 RPS29P1-201ENST00000465274 159 ntBASIC0.9□□□□□ -2.27
PRDM9Q9NQV7 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
PRDM9Q9NQV7 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
PRDM9Q9NQV7 RNU6-1223P-201ENST00000517124 104 ntBASIC0.9□□□□□ -2.27
PRDM9Q9NQV7 MIR6788-201ENST00000618842 66 ntBASIC0.9□□□□□ -2.27
PRDM9Q9NQV7 uc_338.17-201ENST00000619633 179 ntBASIC0.9□□□□□ -2.27
PRDM9Q9NQV7 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
PRDM9Q9NQV7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.89□□□□□ -2.27
PRDM9Q9NQV7 AC108740.1-201ENST00000498629 225 ntBASIC0.88□□□□□ -2.27
PRDM9Q9NQV7 SNORD45.2-201ENST00000363552 72 ntBASIC0.87□□□□□ -2.27
PRDM9Q9NQV7 RNU6-1267P-201ENST00000410747 107 ntBASIC0.87□□□□□ -2.27
PRDM9Q9NQV7 RNU7-55P-201ENST00000459426 62 ntBASIC0.87□□□□□ -2.27
PRDM9Q9NQV7 RNA5SP480-201ENST00000516840 109 ntBASIC0.87□□□□□ -2.27
PRDM9Q9NQV7 MIR4464-201ENST00000580818 92 ntBASIC0.87□□□□□ -2.27
PRDM9Q9NQV7 MIR6515-201ENST00000619843 57 ntBASIC0.87□□□□□ -2.27
PRDM9Q9NQV7 AL391099.1-201ENST00000624635 187 ntBASIC0.87□□□□□ -2.27
PRDM9Q9NQV7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
PRDM9Q9NQV7 SNORD44.1-201ENST00000363202 61 ntBASIC0.86□□□□□ -2.27
PRDM9Q9NQV7 RNU6-973P-201ENST00000364690 107 ntBASIC0.86□□□□□ -2.27
PRDM9Q9NQV7 MIR548J-201ENST00000408833 112 ntBASIC0.86□□□□□ -2.27
PRDM9Q9NQV7 SNORD63.1-201ENST00000516178 80 ntBASIC0.86□□□□□ -2.27
PRDM9Q9NQV7 AL445584.3-201ENST00000617173 78 ntBASIC0.86□□□□□ -2.27
PRDM9Q9NQV7 RNU6-945P-201ENST00000383947 107 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms