Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.25□□□□□ -2.45
TRAIPQ9BWF2 MIR5589-201ENST00000579442 60 ntBASIC-0.25□□□□□ -2.45
TRAIPQ9BWF2 MIR4636-201ENST00000582271 80 ntBASIC-0.25□□□□□ -2.45
TRAIPQ9BWF2 MIR4263-201ENST00000584745 83 ntBASIC-0.25□□□□□ -2.45
TRAIPQ9BWF2 SNORD114-31-201ENST00000363219 75 ntBASIC-0.26□□□□□ -2.45
TRAIPQ9BWF2 RNA5SP173-201ENST00000364857 136 ntBASIC-0.26□□□□□ -2.45
TRAIPQ9BWF2 SNORA49-201ENST00000386157 136 ntBASIC-0.26□□□□□ -2.45
TRAIPQ9BWF2 RNA5SP395-201ENST00000516567 118 ntBASIC-0.26□□□□□ -2.45
TRAIPQ9BWF2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.26□□□□□ -2.45
TRAIPQ9BWF2 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.27□□□□□ -2.45
TRAIPQ9BWF2 MIR4679-1-201ENST00000637619 75 ntBASIC-0.27□□□□□ -2.45
TRAIPQ9BWF2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRAIPQ9BWF2 IGLVI-20-201ENST00000519296 130 ntBASIC-0.28□□□□□ -2.45
TRAIPQ9BWF2 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.3□□□□□ -2.46
TRAIPQ9BWF2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
TRAIPQ9BWF2 AC244250.2-201ENST00000418731 148 ntBASIC-0.3□□□□□ -2.46
TRAIPQ9BWF2 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.3□□□□□ -2.46
TRAIPQ9BWF2 snoR1.1-201ENST00000628177 80 ntBASIC-0.3□□□□□ -2.46
TRAIPQ9BWF2 RNU6-900P-201ENST00000384498 102 ntBASIC-0.31□□□□□ -2.46
TRAIPQ9BWF2 RNU6-901P-201ENST00000384593 106 ntBASIC-0.31□□□□□ -2.46
TRAIPQ9BWF2 SNORD4A-201ENST00000459174 72 ntBASIC-0.31□□□□□ -2.46
TRAIPQ9BWF2 MIR6773-201ENST00000612812 74 ntBASIC-0.31□□□□□ -2.46
TRAIPQ9BWF2 RNU6-573P-201ENST00000383938 106 ntBASIC-0.33□□□□□ -2.46
TRAIPQ9BWF2 MIR521-2-201ENST00000384818 87 ntBASIC-0.33□□□□□ -2.46
TRAIPQ9BWF2 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.33□□□□□ -2.46
TRAIPQ9BWF2 RNU6-330P-201ENST00000363015 107 ntBASIC-0.34□□□□□ -2.46
TRAIPQ9BWF2 AP001180.6-201ENST00000584918 159 ntBASIC-0.34□□□□□ -2.46
TRAIPQ9BWF2 MIR6739-201ENST00000622461 75 ntBASIC-0.34□□□□□ -2.46
TRAIPQ9BWF2 RNU6-502P-201ENST00000362419 108 ntBASIC-0.35□□□□□ -2.47
TRAIPQ9BWF2 SNORD45.1-201ENST00000363181 77 ntBASIC-0.35□□□□□ -2.47
TRAIPQ9BWF2 MIR3666-201ENST00000607845 111 ntBASIC-0.35□□□□□ -2.47
TRAIPQ9BWF2 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.36□□□□□ -2.47
TRAIPQ9BWF2 SNORA33.1-201ENST00000364957 130 ntBASIC-0.37□□□□□ -2.47
TRAIPQ9BWF2 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.37□□□□□ -2.47
TRAIPQ9BWF2 MIR1265-201ENST00000408444 86 ntBASIC-0.37□□□□□ -2.47
TRAIPQ9BWF2 MIR4645-201ENST00000583158 77 ntBASIC-0.37□□□□□ -2.47
TRAIPQ9BWF2 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.38□□□□□ -2.47
TRAIPQ9BWF2 AC145423.2-201ENST00000610631 239 ntBASIC-0.38□□□□□ -2.47
TRAIPQ9BWF2 SNORD114-28-201ENST00000363610 72 ntBASIC-0.39□□□□□ -2.47
TRAIPQ9BWF2 RNU6-787P-201ENST00000384032 107 ntBASIC-0.39□□□□□ -2.47
TRAIPQ9BWF2 MIR4493-201ENST00000584016 73 ntBASIC-0.39□□□□□ -2.47
TRAIPQ9BWF2 MIR8053-201ENST00000613344 75 ntBASIC-0.39□□□□□ -2.47
TRAIPQ9BWF2 MIR6086-201ENST00000638065 55 ntBASIC-0.39□□□□□ -2.47
TRAIPQ9BWF2 MIR9-2-201ENST00000384838 87 ntBASIC-0.4□□□□□ -2.47
TRAIPQ9BWF2 MIRLET7B-201ENST00000385140 83 ntBASIC-0.42□□□□□ -2.48
TRAIPQ9BWF2 RNU6-604P-201ENST00000390917 100 ntBASIC-0.42□□□□□ -2.48
TRAIPQ9BWF2 RNU6-320P-201ENST00000516511 106 ntBASIC-0.42□□□□□ -2.48
TRAIPQ9BWF2 MIR101-1-201ENST00000362265 75 ntBASIC-0.43□□□□□ -2.48
TRAIPQ9BWF2 RNU7-55P-201ENST00000459426 62 ntBASIC-0.43□□□□□ -2.48
TRAIPQ9BWF2 uc_338.36-201ENST00000622331 158 ntBASIC-0.43□□□□□ -2.48
TRAIPQ9BWF2 RNA5SP300-201ENST00000391197 107 ntBASIC-0.44□□□□□ -2.48
TRAIPQ9BWF2 RNA5SP476-201ENST00000516613 103 ntBASIC-0.44□□□□□ -2.48
TRAIPQ9BWF2 AL391099.1-201ENST00000624635 187 ntBASIC-0.44□□□□□ -2.48
TRAIPQ9BWF2 MIR655-201ENST00000362159 97 ntBASIC-0.45□□□□□ -2.48
TRAIPQ9BWF2 RNU6-973P-201ENST00000364690 107 ntBASIC-0.45□□□□□ -2.48
TRAIPQ9BWF2 RNU6-337P-201ENST00000391243 106 ntBASIC-0.45□□□□□ -2.48
TRAIPQ9BWF2 RNU6-758P-201ENST00000516292 89 ntBASIC-0.45□□□□□ -2.48
TRAIPQ9BWF2 SNORA72.7-201ENST00000516349 94 ntBASIC-0.45□□□□□ -2.48
TRAIPQ9BWF2 RNU6-70P-201ENST00000516438 60 ntBASIC-0.45□□□□□ -2.48
TRAIPQ9BWF2 CYP3A54P-201ENST00000566950 75 ntBASIC-0.45□□□□□ -2.48
TRAIPQ9BWF2 RNU6-645P-201ENST00000364649 106 ntBASIC-0.46□□□□□ -2.48
TRAIPQ9BWF2 MIR604-201ENST00000384880 94 ntBASIC-0.46□□□□□ -2.48
TRAIPQ9BWF2 SNORD78.1-201ENST00000390866 65 ntBASIC-0.46□□□□□ -2.48
TRAIPQ9BWF2 RNA5SP470-201ENST00000516463 106 ntBASIC-0.46□□□□□ -2.48
TRAIPQ9BWF2 RNA5SP368-201ENST00000364298 116 ntBASIC-0.47□□□□□ -2.48
TRAIPQ9BWF2 SNORD14C-201ENST00000365382 88 ntBASIC-0.47□□□□□ -2.48
TRAIPQ9BWF2 MIR1255A-201ENST00000408338 113 ntBASIC-0.47□□□□□ -2.48
TRAIPQ9BWF2 RNA5SP66-201ENST00000517178 101 ntBASIC-0.47□□□□□ -2.48
TRAIPQ9BWF2 U7.4-201ENST00000614961 63 ntBASIC-0.47□□□□□ -2.48
TRAIPQ9BWF2 MIR4788-201ENST00000639104 80 ntBASIC-0.47□□□□□ -2.48
TRAIPQ9BWF2 Z95118.1-201ENST00000421372 247 ntBASIC-0.48□□□□□ -2.49
TRAIPQ9BWF2 MTND4LP1-201ENST00000446263 157 ntBASIC-0.48□□□□□ -2.49
TRAIPQ9BWF2 SCARNA18B-201ENST00000458806 135 ntBASIC-0.48□□□□□ -2.49
TRAIPQ9BWF2 MIR8064-201ENST00000612863 90 ntBASIC-0.48□□□□□ -2.49
TRAIPQ9BWF2 RNA5SP275-201ENST00000363936 118 ntBASIC-0.49□□□□□ -2.49
TRAIPQ9BWF2 AC096531.1-201ENST00000419107 107 ntBASIC-0.49□□□□□ -2.49
TRAIPQ9BWF2 AL445193.1-201ENST00000441183 141 ntBASIC-0.49□□□□□ -2.49
TRAIPQ9BWF2 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
TRAIPQ9BWF2 MIR4432-201ENST00000581823 84 ntBASIC-0.49□□□□□ -2.49
TRAIPQ9BWF2 RNU6-228P-201ENST00000362700 106 ntBASIC-0.5□□□□□ -2.49
TRAIPQ9BWF2 MIR154-201ENST00000385243 84 ntBASIC-0.5□□□□□ -2.49
TRAIPQ9BWF2 HAR1A.1-201ENST00000459583 118 ntBASIC-0.5□□□□□ -2.49
TRAIPQ9BWF2 MIR548C-201ENST00000384815 97 ntBASIC-0.51□□□□□ -2.49
TRAIPQ9BWF2 MIR1255B2-201ENST00000408618 67 ntBASIC-0.51□□□□□ -2.49
TRAIPQ9BWF2 AC108676.2-201ENST00000605225 163 ntBASIC-0.51□□□□□ -2.49
TRAIPQ9BWF2 SNORD114-11-201ENST00000363738 75 ntBASIC-0.52□□□□□ -2.49
TRAIPQ9BWF2 AL590491.3-201ENST00000610731 82 ntBASIC-0.52□□□□□ -2.49
TRAIPQ9BWF2 RNU6-24P-201ENST00000384440 107 ntBASIC-0.53□□□□□ -2.49
TRAIPQ9BWF2 RNA5SP451-201ENST00000410588 110 ntBASIC-0.53□□□□□ -2.49
TRAIPQ9BWF2 RNA5SP25-201ENST00000410815 110 ntBASIC-0.53□□□□□ -2.49
TRAIPQ9BWF2 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.53□□□□□ -2.49
TRAIPQ9BWF2 RNU6-656P-201ENST00000516785 107 ntBASIC-0.53□□□□□ -2.49
TRAIPQ9BWF2 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.54□□□□□ -2.5
TRAIPQ9BWF2 AC093726.3-201ENST00000637588 150 ntBASIC-0.54□□□□□ -2.5
TRAIPQ9BWF2 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.55□□□□□ -2.5
TRAIPQ9BWF2 MIR664A-201ENST00000626086 82 ntBASIC-0.55□□□□□ -2.5
TRAIPQ9BWF2 RNU6-895P-201ENST00000384125 103 ntBASIC-0.56□□□□□ -2.5
TRAIPQ9BWF2 SNORA32.3-201ENST00000384772 121 ntBASIC-0.56□□□□□ -2.5
TRAIPQ9BWF2 MIR196A2-201ENST00000385189 110 ntBASIC-0.56□□□□□ -2.5
TRAIPQ9BWF2 RNU6-857P-201ENST00000515893 110 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms