Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 MIR224-201ENST00000384889 81 ntBASIC-0.38□□□□□ -2.47
NUP88Q99567 RNU6-752P-201ENST00000516376 102 ntBASIC-0.38□□□□□ -2.47
NUP88Q99567 RNA5SP67-201ENST00000516422 131 ntBASIC-0.38□□□□□ -2.47
NUP88Q99567 RNU6-320P-201ENST00000516511 106 ntBASIC-0.38□□□□□ -2.47
NUP88Q99567 MIR5582-201ENST00000579697 68 ntBASIC-0.38□□□□□ -2.47
NUP88Q99567 SNORD115-23-201ENST00000364461 82 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 RNA5SP331-201ENST00000364986 107 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 MIRLET7B-201ENST00000385140 83 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 RNA5SP169-201ENST00000517268 117 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 U6.96-201ENST00000636425 70 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 SNORA2.1-201ENST00000363089 137 ntBASIC-0.4□□□□□ -2.47
NUP88Q99567 RNU6-129P-201ENST00000391022 107 ntBASIC-0.4□□□□□ -2.47
NUP88Q99567 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.4□□□□□ -2.47
NUP88Q99567 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.4□□□□□ -2.47
NUP88Q99567 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.4□□□□□ -2.47
NUP88Q99567 RNA5SP66-201ENST00000517178 101 ntBASIC-0.4□□□□□ -2.47
NUP88Q99567 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
NUP88Q99567 MIR409-201ENST00000362237 79 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 RNU6-478P-201ENST00000363904 110 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 AC096531.1-201ENST00000419107 107 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 MIR5704-201ENST00000584029 77 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 MIR8068-201ENST00000618032 68 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 MIR494-201ENST00000349529 81 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 RNU6-973P-201ENST00000364690 107 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 AC114755.3-201ENST00000481111 251 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 uc_338.36-201ENST00000622331 158 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 RNU6-686P-201ENST00000364839 107 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 SNORA33.1-201ENST00000364957 130 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 RNU6-380P-201ENST00000410207 107 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 AL445193.1-201ENST00000441183 141 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 RNU6-557P-201ENST00000516842 110 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 MIR5588-201ENST00000581890 63 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 snoR1.1-201ENST00000628177 80 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 MIR450A2-201ENST00000385022 100 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 RNA5SP170-201ENST00000517150 101 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 AL391099.1-201ENST00000624635 187 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 SNORD38.3-201ENST00000516599 73 ntBASIC-0.45□□□□□ -2.48
NUP88Q99567 MIR4432-201ENST00000581823 84 ntBASIC-0.45□□□□□ -2.48
NUP88Q99567 MIR6851-201ENST00000617060 67 ntBASIC-0.45□□□□□ -2.48
NUP88Q99567 AC093726.3-201ENST00000637588 150 ntBASIC-0.45□□□□□ -2.48
NUP88Q99567 RNU6-330P-201ENST00000363015 107 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 RNU6-242P-201ENST00000384359 107 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 MIR196A2-201ENST00000385189 110 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 SNORD126-201ENST00000459475 77 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 AC022137.1-201ENST00000483735 151 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 SNORD14C-201ENST00000365382 88 ntBASIC-0.47□□□□□ -2.48
NUP88Q99567 RNU6-303P-201ENST00000517091 106 ntBASIC-0.47□□□□□ -2.48
NUP88Q99567 MIR4464-201ENST00000580818 92 ntBASIC-0.48□□□□□ -2.49
NUP88Q99567 MIR6739-201ENST00000622461 75 ntBASIC-0.48□□□□□ -2.49
NUP88Q99567 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.49□□□□□ -2.49
NUP88Q99567 MIR521-2-201ENST00000384818 87 ntBASIC-0.49□□□□□ -2.49
NUP88Q99567 AC074348.1-201ENST00000426503 132 ntBASIC-0.5□□□□□ -2.49
NUP88Q99567 MIR548AX-201ENST00000580117 73 ntBASIC-0.5□□□□□ -2.49
NUP88Q99567 RNU6-979P-201ENST00000383896 107 ntBASIC-0.51□□□□□ -2.49
NUP88Q99567 SNORA32.3-201ENST00000384772 121 ntBASIC-0.51□□□□□ -2.49
NUP88Q99567 RNA5SP266-201ENST00000410273 108 ntBASIC-0.51□□□□□ -2.49
NUP88Q99567 MIR548AZ-201ENST00000616567 95 ntBASIC-0.51□□□□□ -2.49
NUP88Q99567 RNU6-284P-201ENST00000411105 106 ntBASIC-0.52□□□□□ -2.49
NUP88Q99567 RNU6-656P-201ENST00000516785 107 ntBASIC-0.52□□□□□ -2.49
NUP88Q99567 RNU6-807P-201ENST00000516805 107 ntBASIC-0.52□□□□□ -2.49
NUP88Q99567 MIR4436A-201ENST00000585278 85 ntBASIC-0.52□□□□□ -2.49
NUP88Q99567 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 SNORA8.1-201ENST00000384250 140 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 MIR204-201ENST00000385200 110 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 CYP3A54P-201ENST00000566950 75 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 MIR4484-201ENST00000582855 83 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 MIR3675-201ENST00000583661 73 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 MIR6854-201ENST00000614935 69 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.54□□□□□ -2.5
NUP88Q99567 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.54□□□□□ -2.5
NUP88Q99567 MIR1255B2-201ENST00000408618 67 ntBASIC-0.55□□□□□ -2.5
NUP88Q99567 RNU6-721P-201ENST00000410155 105 ntBASIC-0.55□□□□□ -2.5
NUP88Q99567 RNU4-63P-201ENST00000411313 118 ntBASIC-0.55□□□□□ -2.5
NUP88Q99567 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.55□□□□□ -2.5
NUP88Q99567 AL353803.5-201ENST00000599815 141 ntBASIC-0.55□□□□□ -2.5
NUP88Q99567 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 RNU7-171P-201ENST00000459581 62 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 RNA5SP470-201ENST00000516463 106 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 RNU6-881P-201ENST00000516813 102 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 MIR548AG1-201ENST00000579932 66 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 MIR6888-201ENST00000621977 67 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 MIR1297-201ENST00000637311 77 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.57□□□□□ -2.5
NUP88Q99567 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.57□□□□□ -2.5
NUP88Q99567 SNORD75.1-201ENST00000408373 60 ntBASIC-0.57□□□□□ -2.5
NUP88Q99567 SNORD57-201ENST00000448188 72 ntBASIC-0.57□□□□□ -2.5
NUP88Q99567 RNU6-315P-201ENST00000362666 107 ntBASIC-0.58□□□□□ -2.5
NUP88Q99567 SNORA62.4-201ENST00000365504 151 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 703.8 ms