Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC008267.6-201ENST00000441664 139 ntBASIC-1.62□□□□□ -2.67
CCDC89Q8N998 RNU6-746P-201ENST00000384112 109 ntBASIC-1.63□□□□□ -2.67
CCDC89Q8N998 SNORD77.2-201ENST00000391045 68 ntBASIC-1.64□□□□□ -2.67
CCDC89Q8N998 AL035461.1-201ENST00000421490 332 ntBASIC-1.64□□□□□ -2.67
CCDC89Q8N998 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.64□□□□□ -2.67
CCDC89Q8N998 SNORD63.1-201ENST00000516178 80 ntBASIC-1.64□□□□□ -2.67
CCDC89Q8N998 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.64□□□□□ -2.67
CCDC89Q8N998 SNORA26.4-201ENST00000391188 123 ntBASIC-1.66□□□□□ -2.68
CCDC89Q8N998 snoU13.19-201ENST00000459148 104 ntBASIC-1.66□□□□□ -2.68
CCDC89Q8N998 RNU6-766P-201ENST00000362478 107 ntBASIC-1.67□□□□□ -2.68
CCDC89Q8N998 RNU6-681P-201ENST00000364012 104 ntBASIC-1.67□□□□□ -2.68
CCDC89Q8N998 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.67□□□□□ -2.68
CCDC89Q8N998 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.67□□□□□ -2.68
CCDC89Q8N998 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
CCDC89Q8N998 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.68□□□□□ -2.68
CCDC89Q8N998 MTATP8P2-201ENST00000435212 202 ntBASIC-1.68□□□□□ -2.68
CCDC89Q8N998 RNU6-656P-201ENST00000516785 107 ntBASIC-1.68□□□□□ -2.68
CCDC89Q8N998 MIR548AG1-201ENST00000579932 66 ntBASIC-1.68□□□□□ -2.68
CCDC89Q8N998 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.69□□□□□ -2.68
CCDC89Q8N998 SNORD115-22-201ENST00000364456 82 ntBASIC-1.69□□□□□ -2.68
CCDC89Q8N998 AL021921.1-201ENST00000442774 93 ntBASIC-1.69□□□□□ -2.68
CCDC89Q8N998 RNU6-589P-201ENST00000516485 107 ntBASIC-1.69□□□□□ -2.68
CCDC89Q8N998 RNY1P9-201ENST00000532431 109 ntBASIC-1.69□□□□□ -2.68
CCDC89Q8N998 SNORD115-33-201ENST00000363723 82 ntBASIC-1.7□□□□□ -2.68
CCDC89Q8N998 MIR378F-201ENST00000578143 78 ntBASIC-1.7□□□□□ -2.68
CCDC89Q8N998 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.71□□□□□ -2.68
CCDC89Q8N998 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.71□□□□□ -2.68
CCDC89Q8N998 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.71□□□□□ -2.68
CCDC89Q8N998 MIR4668-201ENST00000582284 70 ntBASIC-1.72□□□□□ -2.68
CCDC89Q8N998 MIR4324-201ENST00000584846 72 ntBASIC-1.72□□□□□ -2.68
CCDC89Q8N998 MIR6738-201ENST00000619620 64 ntBASIC-1.72□□□□□ -2.68
CCDC89Q8N998 RNU6-633P-201ENST00000362612 103 ntBASIC-1.73□□□□□ -2.69
CCDC89Q8N998 SNORD115-37-201ENST00000363768 82 ntBASIC-1.73□□□□□ -2.69
CCDC89Q8N998 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.73□□□□□ -2.69
CCDC89Q8N998 RNU6-81P-201ENST00000365608 104 ntBASIC-1.74□□□□□ -2.69
CCDC89Q8N998 RNU7-88P-201ENST00000458752 63 ntBASIC-1.74□□□□□ -2.69
CCDC89Q8N998 U2.7-201ENST00000619197 100 ntBASIC-1.74□□□□□ -2.69
CCDC89Q8N998 MIR450A1-201ENST00000362262 91 ntBASIC-1.75□□□□□ -2.69
CCDC89Q8N998 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.75□□□□□ -2.69
CCDC89Q8N998 MIR3671-201ENST00000580455 88 ntBASIC-1.75□□□□□ -2.69
CCDC89Q8N998 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.76□□□□□ -2.69
CCDC89Q8N998 RNU6-158P-201ENST00000517104 100 ntBASIC-1.76□□□□□ -2.69
CCDC89Q8N998 MIR3668-201ENST00000582138 75 ntBASIC-1.76□□□□□ -2.69
CCDC89Q8N998 MIR548C-201ENST00000384815 97 ntBASIC-1.77□□□□□ -2.69
CCDC89Q8N998 RNU7-134P-201ENST00000458997 64 ntBASIC-1.77□□□□□ -2.69
CCDC89Q8N998 RNU6-645P-201ENST00000364649 106 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 RNU6-246P-201ENST00000384702 107 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 AL353691.2-201ENST00000443795 59 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 RNU6-732P-201ENST00000516033 103 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 RNA5SP67-201ENST00000516422 131 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 U7.5-201ENST00000517224 61 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 RNU6-24P-201ENST00000384440 107 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 MT-TR-201ENST00000387439 65 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 RNU2-51P-201ENST00000410708 197 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 AC093729.1-201ENST00000513074 128 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 RNU6-330P-201ENST00000363015 107 ntBASIC-1.8□□□□□ -2.7
CCDC89Q8N998 RNU6-624P-201ENST00000363411 107 ntBASIC-1.8□□□□□ -2.7
CCDC89Q8N998 MIR29B1-201ENST00000385015 81 ntBASIC-1.8□□□□□ -2.7
CCDC89Q8N998 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.8□□□□□ -2.7
CCDC89Q8N998 AL031737.1-201ENST00000450125 223 ntBASIC-1.8□□□□□ -2.7
CCDC89Q8N998 MIR507-201ENST00000385234 94 ntBASIC-1.81□□□□□ -2.7
CCDC89Q8N998 RNU6-267P-201ENST00000516714 103 ntBASIC-1.81□□□□□ -2.7
CCDC89Q8N998 MIR6818-201ENST00000621576 65 ntBASIC-1.81□□□□□ -2.7
CCDC89Q8N998 MIR2052-201ENST00000636055 55 ntBASIC-1.81□□□□□ -2.7
CCDC89Q8N998 RNU6-834P-201ENST00000362367 110 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 RNU6-22P-201ENST00000384355 107 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 MIR587-201ENST00000384845 96 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 RNU4-61P-201ENST00000411243 107 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 AP002795.1-201ENST00000534879 84 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 MIR4306-201ENST00000583390 91 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 RNU6-10P-201ENST00000384036 107 ntBASIC-1.83□□□□□ -2.7
CCDC89Q8N998 RNU6-807P-201ENST00000516805 107 ntBASIC-1.83□□□□□ -2.7
CCDC89Q8N998 SNORD19-201ENST00000391191 68 ntBASIC-1.84□□□□□ -2.7
CCDC89Q8N998 RNU6-402P-201ENST00000410678 103 ntBASIC-1.84□□□□□ -2.7
CCDC89Q8N998 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.84□□□□□ -2.7
CCDC89Q8N998 AC132825.6-201ENST00000638861 357 ntBASIC-1.84□□□□□ -2.7
CCDC89Q8N998 RNU6-219P-201ENST00000364728 107 ntBASIC-1.85□□□□□ -2.71
CCDC89Q8N998 SNORD116-22-201ENST00000384430 92 ntBASIC-1.85□□□□□ -2.71
CCDC89Q8N998 RNU6-479P-201ENST00000516348 105 ntBASIC-1.85□□□□□ -2.71
CCDC89Q8N998 MALAT1.1-201ENST00000618249 95 ntBASIC-1.85□□□□□ -2.71
CCDC89Q8N998 RNA5SP26-201ENST00000362406 119 ntBASIC-1.86□□□□□ -2.71
CCDC89Q8N998 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.86□□□□□ -2.71
CCDC89Q8N998 MIR3675-201ENST00000583661 73 ntBASIC-1.86□□□□□ -2.71
CCDC89Q8N998 AP001318.4-201ENST00000616637 121 ntBASIC-1.86□□□□□ -2.71
CCDC89Q8N998 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.86□□□□□ -2.71
CCDC89Q8N998 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.87□□□□□ -2.71
CCDC89Q8N998 MIR548BB-201ENST00000626714 66 ntBASIC-1.87□□□□□ -2.71
CCDC89Q8N998 SNORA8.1-201ENST00000384250 140 ntBASIC-1.88□□□□□ -2.71
CCDC89Q8N998 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.88□□□□□ -2.71
CCDC89Q8N998 MIR5683-201ENST00000636514 76 ntBASIC-1.88□□□□□ -2.71
CCDC89Q8N998 RNU6-604P-201ENST00000390917 100 ntBASIC-1.89□□□□□ -2.71
CCDC89Q8N998 RNU6-303P-201ENST00000517091 106 ntBASIC-1.89□□□□□ -2.71
CCDC89Q8N998 RNU6-576P-201ENST00000390854 102 ntBASIC-1.9□□□□□ -2.71
CCDC89Q8N998 MIR548M-201ENST00000408260 86 ntBASIC-1.9□□□□□ -2.71
CCDC89Q8N998 RNU6-982P-201ENST00000516216 102 ntBASIC-1.9□□□□□ -2.71
CCDC89Q8N998 SNORA40.13-201ENST00000516379 120 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms