Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SNORA13-201ENST00000458790 133 ntBASIC-0.63□□□□□ -2.51
CCDC71Q8IV32 RNU6-274P-201ENST00000459566 107 ntBASIC-0.63□□□□□ -2.51
CCDC71Q8IV32 RNA5SP169-201ENST00000517268 117 ntBASIC-0.63□□□□□ -2.51
CCDC71Q8IV32 RNU6-633P-201ENST00000362612 103 ntBASIC-0.64□□□□□ -2.51
CCDC71Q8IV32 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
CCDC71Q8IV32 AL500527.2-201ENST00000454105 95 ntBASIC-0.64□□□□□ -2.51
CCDC71Q8IV32 MIR4306-201ENST00000583390 91 ntBASIC-0.64□□□□□ -2.51
CCDC71Q8IV32 MIR4723-201ENST00000585070 81 ntBASIC-0.64□□□□□ -2.51
CCDC71Q8IV32 MIR6509-201ENST00000614603 85 ntBASIC-0.64□□□□□ -2.51
CCDC71Q8IV32 snoR1.1-201ENST00000628177 80 ntBASIC-0.64□□□□□ -2.51
CCDC71Q8IV32 U6.96-201ENST00000636425 70 ntBASIC-0.64□□□□□ -2.51
CCDC71Q8IV32 SNORD115-27-201ENST00000364430 82 ntBASIC-0.65□□□□□ -2.51
CCDC71Q8IV32 SNORD115-23-201ENST00000364461 82 ntBASIC-0.65□□□□□ -2.51
CCDC71Q8IV32 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.65□□□□□ -2.51
CCDC71Q8IV32 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.65□□□□□ -2.51
CCDC71Q8IV32 AL450471.1-201ENST00000447509 127 ntBASIC-0.65□□□□□ -2.51
CCDC71Q8IV32 AL691482.2-201ENST00000457453 84 ntBASIC-0.65□□□□□ -2.51
CCDC71Q8IV32 RNU6-406P-201ENST00000516470 107 ntBASIC-0.65□□□□□ -2.51
CCDC71Q8IV32 SNORD38.3-201ENST00000516599 73 ntBASIC-0.65□□□□□ -2.51
CCDC71Q8IV32 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.66□□□□□ -2.52
CCDC71Q8IV32 SNORA2.1-201ENST00000363089 137 ntBASIC-0.66□□□□□ -2.52
CCDC71Q8IV32 SNORA3B-201ENST00000391305 131 ntBASIC-0.66□□□□□ -2.52
CCDC71Q8IV32 YWHAEP3-201ENST00000582767 121 ntBASIC-0.66□□□□□ -2.52
CCDC71Q8IV32 MIR3657-201ENST00000584818 117 ntBASIC-0.66□□□□□ -2.52
CCDC71Q8IV32 MIR6854-201ENST00000614935 69 ntBASIC-0.66□□□□□ -2.52
CCDC71Q8IV32 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.67□□□□□ -2.52
CCDC71Q8IV32 RNY4P27-201ENST00000363341 96 ntBASIC-0.67□□□□□ -2.52
CCDC71Q8IV32 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
CCDC71Q8IV32 AC021146.6-201ENST00000514659 117 ntBASIC-0.67□□□□□ -2.52
CCDC71Q8IV32 RNU6-752P-201ENST00000516376 102 ntBASIC-0.67□□□□□ -2.52
CCDC71Q8IV32 MIR4668-201ENST00000582284 70 ntBASIC-0.67□□□□□ -2.52
CCDC71Q8IV32 MIR4499-201ENST00000584834 69 ntBASIC-0.67□□□□□ -2.52
CCDC71Q8IV32 MIR365A-201ENST00000362260 87 ntBASIC-0.68□□□□□ -2.52
CCDC71Q8IV32 SNORD115-37-201ENST00000363768 82 ntBASIC-0.68□□□□□ -2.52
CCDC71Q8IV32 RNU6-215P-201ENST00000365169 102 ntBASIC-0.68□□□□□ -2.52
CCDC71Q8IV32 MIR518B-201ENST00000385127 83 ntBASIC-0.68□□□□□ -2.52
CCDC71Q8IV32 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.68□□□□□ -2.52
CCDC71Q8IV32 MIR4441-201ENST00000582623 100 ntBASIC-0.68□□□□□ -2.52
CCDC71Q8IV32 MIR5704-201ENST00000584029 77 ntBASIC-0.68□□□□□ -2.52
CCDC71Q8IV32 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.68□□□□□ -2.52
CCDC71Q8IV32 MALAT1.1-201ENST00000618249 95 ntBASIC-0.68□□□□□ -2.52
CCDC71Q8IV32 RNU6-208P-201ENST00000362431 107 ntBASIC-0.69□□□□□ -2.52
CCDC71Q8IV32 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.69□□□□□ -2.52
CCDC71Q8IV32 SNORD116-22-201ENST00000384430 92 ntBASIC-0.69□□□□□ -2.52
CCDC71Q8IV32 MIR203A-201ENST00000384836 110 ntBASIC-0.69□□□□□ -2.52
CCDC71Q8IV32 MIR1285-2-201ENST00000408311 88 ntBASIC-0.69□□□□□ -2.52
CCDC71Q8IV32 RNU6-919P-201ENST00000516731 104 ntBASIC-0.69□□□□□ -2.52
CCDC71Q8IV32 RNU6-340P-201ENST00000364005 107 ntBASIC-0.7□□□□□ -2.52
CCDC71Q8IV32 RNU6-681P-201ENST00000364012 104 ntBASIC-0.7□□□□□ -2.52
CCDC71Q8IV32 SNORD74.6-201ENST00000364796 70 ntBASIC-0.7□□□□□ -2.52
CCDC71Q8IV32 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.7□□□□□ -2.52
CCDC71Q8IV32 SNORD20-201ENST00000384550 80 ntBASIC-0.7□□□□□ -2.52
CCDC71Q8IV32 SNORD77.2-201ENST00000391045 68 ntBASIC-0.7□□□□□ -2.52
CCDC71Q8IV32 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.7□□□□□ -2.52
CCDC71Q8IV32 MIR3165-201ENST00000579874 75 ntBASIC-0.7□□□□□ -2.52
CCDC71Q8IV32 SNORD114-3-201ENST00000364969 75 ntBASIC-0.71□□□□□ -2.52
CCDC71Q8IV32 RNU6-32P-201ENST00000383948 107 ntBASIC-0.71□□□□□ -2.52
CCDC71Q8IV32 RNU6-13P-201ENST00000384248 107 ntBASIC-0.71□□□□□ -2.52
CCDC71Q8IV32 RNU6-12P-201ENST00000384604 107 ntBASIC-0.71□□□□□ -2.52
CCDC71Q8IV32 RNU6-41P-201ENST00000384741 107 ntBASIC-0.71□□□□□ -2.52
CCDC71Q8IV32 MIR1207-201ENST00000408249 87 ntBASIC-0.71□□□□□ -2.52
CCDC71Q8IV32 RNU4-61P-201ENST00000411243 107 ntBASIC-0.71□□□□□ -2.52
CCDC71Q8IV32 RNA5SP147-201ENST00000516493 109 ntBASIC-0.71□□□□□ -2.52
CCDC71Q8IV32 RNU6-624P-201ENST00000363411 107 ntBASIC-0.72□□□□□ -2.52
CCDC71Q8IV32 SNORA62.4-201ENST00000365504 151 ntBASIC-0.72□□□□□ -2.52
CCDC71Q8IV32 AC093729.1-201ENST00000513074 128 ntBASIC-0.72□□□□□ -2.52
CCDC71Q8IV32 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
CCDC71Q8IV32 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.73□□□□□ -2.53
CCDC71Q8IV32 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.73□□□□□ -2.53
CCDC71Q8IV32 MIR548AI-201ENST00000579940 88 ntBASIC-0.73□□□□□ -2.53
CCDC71Q8IV32 MIR8068-201ENST00000618032 68 ntBASIC-0.73□□□□□ -2.53
CCDC71Q8IV32 AC090617.8-201ENST00000623339 167 ntBASIC-0.73□□□□□ -2.53
CCDC71Q8IV32 MIR1246-201ENST00000636535 73 ntBASIC-0.73□□□□□ -2.53
CCDC71Q8IV32 SNORA63.4-201ENST00000362763 126 ntBASIC-0.74□□□□□ -2.53
CCDC71Q8IV32 RNU6-219P-201ENST00000364728 107 ntBASIC-0.74□□□□□ -2.53
CCDC71Q8IV32 SNORA33.1-201ENST00000364957 130 ntBASIC-0.74□□□□□ -2.53
CCDC71Q8IV32 RNU6-147P-201ENST00000383983 107 ntBASIC-0.74□□□□□ -2.53
CCDC71Q8IV32 MIR521-2-201ENST00000384818 87 ntBASIC-0.74□□□□□ -2.53
CCDC71Q8IV32 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.74□□□□□ -2.53
CCDC71Q8IV32 MIR3179-1-201ENST00000578940 84 ntBASIC-0.74□□□□□ -2.53
CCDC71Q8IV32 MIR3179-2-201ENST00000579107 84 ntBASIC-0.74□□□□□ -2.53
CCDC71Q8IV32 MIR3179-3-201ENST00000579566 84 ntBASIC-0.74□□□□□ -2.53
CCDC71Q8IV32 MIR3179-4-201ENST00000617599 84 ntBASIC-0.74□□□□□ -2.53
CCDC71Q8IV32 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.75□□□□□ -2.53
CCDC71Q8IV32 RNU6-497P-201ENST00000365316 104 ntBASIC-0.75□□□□□ -2.53
CCDC71Q8IV32 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.75□□□□□ -2.53
CCDC71Q8IV32 AL035461.1-201ENST00000421490 332 ntBASIC-0.75□□□□□ -2.53
CCDC71Q8IV32 SNORD22.1-201ENST00000516331 125 ntBASIC-0.75□□□□□ -2.53
CCDC71Q8IV32 uc_338.19-201ENST00000616808 99 ntBASIC-0.75□□□□□ -2.53
CCDC71Q8IV32 MIR6739-201ENST00000622461 75 ntBASIC-0.75□□□□□ -2.53
CCDC71Q8IV32 RNU6-640P-201ENST00000363693 105 ntBASIC-0.76□□□□□ -2.53
CCDC71Q8IV32 RNU6-226P-201ENST00000363778 107 ntBASIC-0.76□□□□□ -2.53
CCDC71Q8IV32 RNU6-402P-201ENST00000410678 103 ntBASIC-0.76□□□□□ -2.53
CCDC71Q8IV32 SCARNA18B-201ENST00000458806 135 ntBASIC-0.76□□□□□ -2.53
CCDC71Q8IV32 AC140658.3-201ENST00000567603 271 ntBASIC-0.76□□□□□ -2.53
CCDC71Q8IV32 RNU6-905P-201ENST00000384434 107 ntBASIC-0.77□□□□□ -2.53
CCDC71Q8IV32 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.77□□□□□ -2.53
CCDC71Q8IV32 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.77□□□□□ -2.53
CCDC71Q8IV32 RNU6-881P-201ENST00000516813 102 ntBASIC-0.77□□□□□ -2.53
CCDC71Q8IV32 RNU6-706P-201ENST00000517229 104 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 1686.6 ms