Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-592P-201ENST00000411333 103 ntBASIC-0.69□□□□□ -2.52
NPHP3Q7Z494 AL035461.1-201ENST00000421490 332 ntBASIC-0.69□□□□□ -2.52
NPHP3Q7Z494 RNU6-640P-201ENST00000363693 105 ntBASIC-0.7□□□□□ -2.52
NPHP3Q7Z494 SNORD115-37-201ENST00000363768 82 ntBASIC-0.7□□□□□ -2.52
NPHP3Q7Z494 RNU6-340P-201ENST00000364005 107 ntBASIC-0.7□□□□□ -2.52
NPHP3Q7Z494 RNU6-44P-201ENST00000384045 107 ntBASIC-0.7□□□□□ -2.52
NPHP3Q7Z494 RNU6-905P-201ENST00000384434 107 ntBASIC-0.7□□□□□ -2.52
NPHP3Q7Z494 SNORD77.2-201ENST00000391045 68 ntBASIC-0.7□□□□□ -2.52
NPHP3Q7Z494 RNU6-402P-201ENST00000410678 103 ntBASIC-0.7□□□□□ -2.52
NPHP3Q7Z494 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.7□□□□□ -2.52
NPHP3Q7Z494 RNU6-219P-201ENST00000364728 107 ntBASIC-0.71□□□□□ -2.52
NPHP3Q7Z494 MIR4436A-201ENST00000585278 85 ntBASIC-0.71□□□□□ -2.52
NPHP3Q7Z494 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.72□□□□□ -2.52
NPHP3Q7Z494 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.72□□□□□ -2.52
NPHP3Q7Z494 RNY1P7-201ENST00000384743 110 ntBASIC-0.72□□□□□ -2.52
NPHP3Q7Z494 AC093729.1-201ENST00000513074 128 ntBASIC-0.72□□□□□ -2.52
NPHP3Q7Z494 YWHAEP3-201ENST00000582767 121 ntBASIC-0.72□□□□□ -2.52
NPHP3Q7Z494 U2.22-201ENST00000636441 106 ntBASIC-0.72□□□□□ -2.52
NPHP3Q7Z494 MIR518B-201ENST00000385127 83 ntBASIC-0.73□□□□□ -2.53
NPHP3Q7Z494 MIR548AI-201ENST00000579940 88 ntBASIC-0.73□□□□□ -2.53
NPHP3Q7Z494 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
NPHP3Q7Z494 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.74□□□□□ -2.53
NPHP3Q7Z494 SNORD114-14-201ENST00000362723 75 ntBASIC-0.75□□□□□ -2.53
NPHP3Q7Z494 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.75□□□□□ -2.53
NPHP3Q7Z494 SNORD22.1-201ENST00000516331 125 ntBASIC-0.75□□□□□ -2.53
NPHP3Q7Z494 MIR548BB-201ENST00000626714 66 ntBASIC-0.75□□□□□ -2.53
NPHP3Q7Z494 RNU6-624P-201ENST00000363411 107 ntBASIC-0.76□□□□□ -2.53
NPHP3Q7Z494 RNU6-681P-201ENST00000364012 104 ntBASIC-0.76□□□□□ -2.53
NPHP3Q7Z494 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.76□□□□□ -2.53
NPHP3Q7Z494 CYP3A54P-201ENST00000566950 75 ntBASIC-0.76□□□□□ -2.53
NPHP3Q7Z494 AC140658.3-201ENST00000567603 271 ntBASIC-0.76□□□□□ -2.53
NPHP3Q7Z494 RNU6-497P-201ENST00000365316 104 ntBASIC-0.77□□□□□ -2.53
NPHP3Q7Z494 MIR1255B2-201ENST00000408618 67 ntBASIC-0.77□□□□□ -2.53
NPHP3Q7Z494 RNU6-721P-201ENST00000410155 105 ntBASIC-0.77□□□□□ -2.53
NPHP3Q7Z494 AC021146.6-201ENST00000514659 117 ntBASIC-0.77□□□□□ -2.53
NPHP3Q7Z494 RNU6-752P-201ENST00000516376 102 ntBASIC-0.77□□□□□ -2.53
NPHP3Q7Z494 MIR3179-1-201ENST00000578940 84 ntBASIC-0.77□□□□□ -2.53
NPHP3Q7Z494 MIR3179-2-201ENST00000579107 84 ntBASIC-0.77□□□□□ -2.53
NPHP3Q7Z494 MIR3179-3-201ENST00000579566 84 ntBASIC-0.77□□□□□ -2.53
NPHP3Q7Z494 MIR3179-4-201ENST00000617599 84 ntBASIC-0.77□□□□□ -2.53
NPHP3Q7Z494 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.78□□□□□ -2.53
NPHP3Q7Z494 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.78□□□□□ -2.53
NPHP3Q7Z494 AL353803.5-201ENST00000599815 141 ntBASIC-0.78□□□□□ -2.53
NPHP3Q7Z494 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.79□□□□□ -2.54
NPHP3Q7Z494 MIR521-2-201ENST00000384818 87 ntBASIC-0.79□□□□□ -2.54
NPHP3Q7Z494 SNORA13-201ENST00000458790 133 ntBASIC-0.79□□□□□ -2.54
NPHP3Q7Z494 MIR3681-201ENST00000580089 72 ntBASIC-0.8□□□□□ -2.54
NPHP3Q7Z494 MIR6739-201ENST00000622461 75 ntBASIC-0.8□□□□□ -2.54
NPHP3Q7Z494 MIR124-2-201ENST00000385081 109 ntBASIC-0.81□□□□□ -2.54
NPHP3Q7Z494 SNORD74.6-201ENST00000364796 70 ntBASIC-0.82□□□□□ -2.54
NPHP3Q7Z494 SNORA62.4-201ENST00000365504 151 ntBASIC-0.82□□□□□ -2.54
NPHP3Q7Z494 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.82□□□□□ -2.54
NPHP3Q7Z494 AP000533.3-201ENST00000447704 118 ntBASIC-0.82□□□□□ -2.54
NPHP3Q7Z494 RNU6-168P-201ENST00000516189 101 ntBASIC-0.82□□□□□ -2.54
NPHP3Q7Z494 RNU6-844P-201ENST00000517175 102 ntBASIC-0.82□□□□□ -2.54
NPHP3Q7Z494 MIR4464-201ENST00000580818 92 ntBASIC-0.82□□□□□ -2.54
NPHP3Q7Z494 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.83□□□□□ -2.54
NPHP3Q7Z494 RNA5SP89-201ENST00000410300 108 ntBASIC-0.83□□□□□ -2.54
NPHP3Q7Z494 RNY1P9-201ENST00000532431 109 ntBASIC-0.83□□□□□ -2.54
NPHP3Q7Z494 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.84□□□□□ -2.54
NPHP3Q7Z494 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.84□□□□□ -2.54
NPHP3Q7Z494 RNU6-675P-201ENST00000384236 104 ntBASIC-0.84□□□□□ -2.54
NPHP3Q7Z494 AC022137.1-201ENST00000483735 151 ntBASIC-0.84□□□□□ -2.54
NPHP3Q7Z494 RNA5SP470-201ENST00000516463 106 ntBASIC-0.84□□□□□ -2.54
NPHP3Q7Z494 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.85□□□□□ -2.54
NPHP3Q7Z494 RNU6-49P-201ENST00000384256 107 ntBASIC-0.85□□□□□ -2.54
NPHP3Q7Z494 MIR517B-201ENST00000385102 67 ntBASIC-0.85□□□□□ -2.54
NPHP3Q7Z494 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.85□□□□□ -2.54
NPHP3Q7Z494 SNORD18.2-201ENST00000459604 70 ntBASIC-0.85□□□□□ -2.54
NPHP3Q7Z494 MIR6888-201ENST00000621977 67 ntBASIC-0.85□□□□□ -2.54
NPHP3Q7Z494 RNU6-330P-201ENST00000363015 107 ntBASIC-0.86□□□□□ -2.55
NPHP3Q7Z494 RNU6-478P-201ENST00000363904 110 ntBASIC-0.86□□□□□ -2.55
NPHP3Q7Z494 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.86□□□□□ -2.55
NPHP3Q7Z494 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.86□□□□□ -2.55
NPHP3Q7Z494 SNORD57-201ENST00000448188 72 ntBASIC-0.86□□□□□ -2.55
NPHP3Q7Z494 RNU6-881P-201ENST00000516813 102 ntBASIC-0.86□□□□□ -2.55
NPHP3Q7Z494 RNU6-557P-201ENST00000516842 110 ntBASIC-0.86□□□□□ -2.55
NPHP3Q7Z494 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.87□□□□□ -2.55
NPHP3Q7Z494 AL445584.3-201ENST00000617173 78 ntBASIC-0.87□□□□□ -2.55
NPHP3Q7Z494 RNU6-686P-201ENST00000364839 107 ntBASIC-0.88□□□□□ -2.55
NPHP3Q7Z494 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.88□□□□□ -2.55
NPHP3Q7Z494 RNU6-656P-201ENST00000516785 107 ntBASIC-0.88□□□□□ -2.55
NPHP3Q7Z494 AC006160.2-201ENST00000637708 154 ntBASIC-0.88□□□□□ -2.55
NPHP3Q7Z494 MIR519A2-201ENST00000384990 87 ntBASIC-0.89□□□□□ -2.55
NPHP3Q7Z494 RNU6-303P-201ENST00000517091 106 ntBASIC-0.89□□□□□ -2.55
NPHP3Q7Z494 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.89□□□□□ -2.55
NPHP3Q7Z494 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.89□□□□□ -2.55
NPHP3Q7Z494 RNU6-129P-201ENST00000391022 107 ntBASIC-0.89□□□□□ -2.55
NPHP3Q7Z494 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.89□□□□□ -2.55
NPHP3Q7Z494 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.9□□□□□ -2.55
NPHP3Q7Z494 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.9□□□□□ -2.55
NPHP3Q7Z494 RNU6-518P-201ENST00000516056 96 ntBASIC-0.9□□□□□ -2.55
NPHP3Q7Z494 MIR3675-201ENST00000583661 73 ntBASIC-0.9□□□□□ -2.55
NPHP3Q7Z494 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.91□□□□□ -2.56
NPHP3Q7Z494 MIR587-201ENST00000384845 96 ntBASIC-0.91□□□□□ -2.56
NPHP3Q7Z494 RNY4P30-201ENST00000410216 95 ntBASIC-0.91□□□□□ -2.56
NPHP3Q7Z494 SNX3P1X-201ENST00000414887 175 ntBASIC-0.91□□□□□ -2.56
NPHP3Q7Z494 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.91□□□□□ -2.56
NPHP3Q7Z494 IGLL4P-201ENST00000614590 133 ntBASIC-0.91□□□□□ -2.56
NPHP3Q7Z494 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 263.9 ms