Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU4-54P-201ENST00000516428 129 ntBASIC1.04□□□□□ -2.24
LYSMD3Q7Z3D4 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
LYSMD3Q7Z3D4 RNU6-502P-201ENST00000362419 108 ntBASIC1.03□□□□□ -2.24
LYSMD3Q7Z3D4 RNU6-1036P-201ENST00000383959 104 ntBASIC1.03□□□□□ -2.24
LYSMD3Q7Z3D4 MIR608-201ENST00000384820 100 ntBASIC1.03□□□□□ -2.24
LYSMD3Q7Z3D4 MIR548X-201ENST00000580069 75 ntBASIC1.03□□□□□ -2.24
LYSMD3Q7Z3D4 RPS29P1-201ENST00000465274 159 ntBASIC1.02□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-782P-201ENST00000516852 104 ntBASIC1.02□□□□□ -2.25
LYSMD3Q7Z3D4 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
LYSMD3Q7Z3D4 MIR6755-201ENST00000619993 66 ntBASIC1.02□□□□□ -2.25
LYSMD3Q7Z3D4 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 MIR518A1-201ENST00000385068 85 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 SNORD71-201ENST00000411292 86 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 AC084368.1-201ENST00000620935 65 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 MIR429-201ENST00000362106 83 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-458P-201ENST00000384179 107 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 MIR151B-201ENST00000584249 96 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 U6.58-201ENST00000613107 107 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 AC022709.1-201ENST00000615967 87 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 MIR6767-201ENST00000637302 66 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 RN7SL660P-201ENST00000614852 299 ntBASIC0.99□□□□□ -2.25
LYSMD3Q7Z3D4 MIR548J-201ENST00000408833 112 ntBASIC0.98□□□□□ -2.25
LYSMD3Q7Z3D4 MIR760-201ENST00000390220 80 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-930P-201ENST00000390938 100 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-848P-201ENST00000515948 107 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-617P-201ENST00000516147 107 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-473P-201ENST00000516164 107 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 MIR4490-201ENST00000582647 84 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 AC098934.3-201ENST00000430450 190 ntBASIC0.95□□□□□ -2.26
LYSMD3Q7Z3D4 MIR3925-201ENST00000584674 77 ntBASIC0.95□□□□□ -2.26
LYSMD3Q7Z3D4 AL353803.5-201ENST00000599815 141 ntBASIC0.94□□□□□ -2.26
LYSMD3Q7Z3D4 AL590095.2-201ENST00000604136 117 ntBASIC0.94□□□□□ -2.26
LYSMD3Q7Z3D4 AC211469.2-201ENST00000605461 205 ntBASIC0.94□□□□□ -2.26
LYSMD3Q7Z3D4 RNU6-110P-201ENST00000384508 104 ntBASIC0.93□□□□□ -2.26
LYSMD3Q7Z3D4 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
LYSMD3Q7Z3D4 RNU6-598P-201ENST00000364017 105 ntBASIC0.92□□□□□ -2.26
LYSMD3Q7Z3D4 RNA5SP128-201ENST00000365305 116 ntBASIC0.92□□□□□ -2.26
LYSMD3Q7Z3D4 MIR499B-201ENST00000636498 73 ntBASIC0.92□□□□□ -2.26
LYSMD3Q7Z3D4 MIR373-201ENST00000362273 69 ntBASIC0.91□□□□□ -2.26
LYSMD3Q7Z3D4 Y_RNA.540-201ENST00000384638 111 ntBASIC0.91□□□□□ -2.26
LYSMD3Q7Z3D4 MIR876-201ENST00000401147 81 ntBASIC0.91□□□□□ -2.26
LYSMD3Q7Z3D4 MIR598-201ENST00000384868 97 ntBASIC0.9□□□□□ -2.27
LYSMD3Q7Z3D4 MIR579-201ENST00000385221 98 ntBASIC0.9□□□□□ -2.27
LYSMD3Q7Z3D4 MIR548F3-201ENST00000408509 87 ntBASIC0.9□□□□□ -2.27
LYSMD3Q7Z3D4 RNU6-419P-201ENST00000517030 63 ntBASIC0.9□□□□□ -2.27
LYSMD3Q7Z3D4 U2.18-201ENST00000622185 84 ntBASIC0.9□□□□□ -2.27
LYSMD3Q7Z3D4 SNORD115-23-201ENST00000364461 82 ntBASIC0.89□□□□□ -2.27
LYSMD3Q7Z3D4 RNU7-129P-201ENST00000516128 62 ntBASIC0.89□□□□□ -2.27
LYSMD3Q7Z3D4 AP000676.1-201ENST00000533307 52 ntBASIC0.89□□□□□ -2.27
LYSMD3Q7Z3D4 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
LYSMD3Q7Z3D4 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
LYSMD3Q7Z3D4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.88□□□□□ -2.27
LYSMD3Q7Z3D4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.88□□□□□ -2.27
LYSMD3Q7Z3D4 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
LYSMD3Q7Z3D4 CYP3A137P-201ENST00000562436 69 ntBASIC0.88□□□□□ -2.27
LYSMD3Q7Z3D4 MIR5000-201ENST00000577717 103 ntBASIC0.88□□□□□ -2.27
LYSMD3Q7Z3D4 RNA5SP480-201ENST00000516840 109 ntBASIC0.87□□□□□ -2.27
LYSMD3Q7Z3D4 RNU7-151P-201ENST00000516930 53 ntBASIC0.87□□□□□ -2.27
LYSMD3Q7Z3D4 MIR106A-201ENST00000384870 81 ntBASIC0.86□□□□□ -2.27
LYSMD3Q7Z3D4 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
LYSMD3Q7Z3D4 SCARNA11.2-201ENST00000517183 154 ntBASIC0.86□□□□□ -2.27
LYSMD3Q7Z3D4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 SNORD114-26-201ENST00000363543 72 ntBASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 RNU7-160P-201ENST00000516660 62 ntBASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 MIR4432-201ENST00000581823 84 ntBASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 AC108676.2-201ENST00000605225 163 ntBASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 RNU6-838P-201ENST00000363399 108 ntBASIC0.84□□□□□ -2.27
LYSMD3Q7Z3D4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
LYSMD3Q7Z3D4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-924P-201ENST00000362926 108 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 SNORD44.1-201ENST00000363202 61 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-863P-201ENST00000515989 104 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-1262P-201ENST00000516217 96 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-1206P-201ENST00000516339 103 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 Y_RNA.698-201ENST00000516798 118 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 Y_RNA.69-201ENST00000362885 109 ntBASIC0.82□□□□□ -2.28
LYSMD3Q7Z3D4 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
LYSMD3Q7Z3D4 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
LYSMD3Q7Z3D4 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
LYSMD3Q7Z3D4 snoR1.1-201ENST00000628177 80 ntBASIC0.82□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-945P-201ENST00000383947 107 ntBASIC0.79□□□□□ -2.28
LYSMD3Q7Z3D4 MIR548AA1-201ENST00000384971 97 ntBASIC0.79□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-696P-201ENST00000390834 107 ntBASIC0.79□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
LYSMD3Q7Z3D4 RNA5SP98-201ENST00000363158 137 ntBASIC0.78□□□□□ -2.28
LYSMD3Q7Z3D4 MIR545-201ENST00000385085 106 ntBASIC0.78□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-247P-201ENST00000362636 107 ntBASIC0.77□□□□□ -2.29
LYSMD3Q7Z3D4 RNU6-995P-201ENST00000391244 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 348.3 ms