Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SNORD114-29-201ENST00000364819 70 ntBASIC0.38□□□□□ -2.35
KRT40Q6A162 RNU6-540P-201ENST00000384622 101 ntBASIC0.38□□□□□ -2.35
KRT40Q6A162 MIR548H2-201ENST00000408874 88 ntBASIC0.38□□□□□ -2.35
KRT40Q6A162 MIR8053-201ENST00000613344 75 ntBASIC0.38□□□□□ -2.35
KRT40Q6A162 AC084368.1-201ENST00000620935 65 ntBASIC0.38□□□□□ -2.35
KRT40Q6A162 RNA5SP299-201ENST00000391203 116 ntBASIC0.37□□□□□ -2.35
KRT40Q6A162 RNU6-656P-201ENST00000516785 107 ntBASIC0.37□□□□□ -2.35
KRT40Q6A162 RNU6-881P-201ENST00000516813 102 ntBASIC0.37□□□□□ -2.35
KRT40Q6A162 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
KRT40Q6A162 RNA5SP25-201ENST00000410815 110 ntBASIC0.36□□□□□ -2.35
KRT40Q6A162 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
KRT40Q6A162 Y_RNA.250-201ENST00000364542 110 ntBASIC0.35□□□□□ -2.35
KRT40Q6A162 RNU6-645P-201ENST00000364649 106 ntBASIC0.35□□□□□ -2.35
KRT40Q6A162 SNORD116-24-201ENST00000384549 92 ntBASIC0.35□□□□□ -2.35
KRT40Q6A162 RNU6-782P-201ENST00000516852 104 ntBASIC0.35□□□□□ -2.35
KRT40Q6A162 SCARNA11.2-201ENST00000517183 154 ntBASIC0.35□□□□□ -2.35
KRT40Q6A162 SNORA33.1-201ENST00000364957 130 ntBASIC0.34□□□□□ -2.36
KRT40Q6A162 MIR5190-201ENST00000581537 80 ntBASIC0.34□□□□□ -2.36
KRT40Q6A162 MIR643-201ENST00000385267 97 ntBASIC0.33□□□□□ -2.36
KRT40Q6A162 MIR521-2-201ENST00000384818 87 ntBASIC0.32□□□□□ -2.36
KRT40Q6A162 Y_RNA.185-201ENST00000363894 100 ntBASIC0.31□□□□□ -2.36
KRT40Q6A162 RNU6-1036P-201ENST00000383959 104 ntBASIC0.31□□□□□ -2.36
KRT40Q6A162 Z95118.1-201ENST00000421372 247 ntBASIC0.31□□□□□ -2.36
KRT40Q6A162 RNU6-871P-201ENST00000516122 100 ntBASIC0.31□□□□□ -2.36
KRT40Q6A162 AC090617.8-201ENST00000623339 167 ntBASIC0.31□□□□□ -2.36
KRT40Q6A162 SNORA75.1-201ENST00000391130 148 ntBASIC0.3□□□□□ -2.36
KRT40Q6A162 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
KRT40Q6A162 MIR4315-1-201ENST00000636800 73 ntBASIC0.29□□□□□ -2.36
KRT40Q6A162 MIR4315-2-201ENST00000640925 73 ntBASIC0.29□□□□□ -2.36
KRT40Q6A162 RNU6-1216P-201ENST00000362590 107 ntBASIC0.28□□□□□ -2.36
KRT40Q6A162 SNORA15B-2-201ENST00000384058 135 ntBASIC0.28□□□□□ -2.36
KRT40Q6A162 RNU6-895P-201ENST00000384125 103 ntBASIC0.28□□□□□ -2.36
KRT40Q6A162 SNORA15B-1-201ENST00000384334 135 ntBASIC0.28□□□□□ -2.36
KRT40Q6A162 RNU6-1162P-201ENST00000384443 104 ntBASIC0.28□□□□□ -2.36
KRT40Q6A162 MIR106A-201ENST00000384870 81 ntBASIC0.28□□□□□ -2.36
KRT40Q6A162 RNU6-663P-201ENST00000391105 106 ntBASIC0.28□□□□□ -2.36
KRT40Q6A162 RNU6-337P-201ENST00000391243 106 ntBASIC0.28□□□□□ -2.36
KRT40Q6A162 AC114801.3-201ENST00000510231 177 ntBASIC0.28□□□□□ -2.36
KRT40Q6A162 RNA5SP98-201ENST00000363158 137 ntBASIC0.27□□□□□ -2.37
KRT40Q6A162 RNU6-758P-201ENST00000516292 89 ntBASIC0.27□□□□□ -2.37
KRT40Q6A162 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
KRT40Q6A162 MIR409-201ENST00000362237 79 ntBASIC0.25□□□□□ -2.37
KRT40Q6A162 RNA5SP368-201ENST00000364298 116 ntBASIC0.25□□□□□ -2.37
KRT40Q6A162 SNORD114-15-201ENST00000364687 72 ntBASIC0.25□□□□□ -2.37
KRT40Q6A162 SNORD30.1-201ENST00000391309 70 ntBASIC0.25□□□□□ -2.37
KRT40Q6A162 IGLVI-20-201ENST00000519296 130 ntBASIC0.25□□□□□ -2.37
KRT40Q6A162 MIR6773-201ENST00000612812 74 ntBASIC0.25□□□□□ -2.37
KRT40Q6A162 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.25□□□□□ -2.37
KRT40Q6A162 RNU6-502P-201ENST00000362419 108 ntBASIC0.24□□□□□ -2.37
KRT40Q6A162 SNORA42.1-201ENST00000363515 137 ntBASIC0.24□□□□□ -2.37
KRT40Q6A162 RNU6-649P-201ENST00000384463 107 ntBASIC0.24□□□□□ -2.37
KRT40Q6A162 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
KRT40Q6A162 AC104408.1-201ENST00000605241 170 ntBASIC0.24□□□□□ -2.37
KRT40Q6A162 U6.96-201ENST00000636425 70 ntBASIC0.24□□□□□ -2.37
KRT40Q6A162 MTND4LP1-201ENST00000446263 157 ntBASIC0.23□□□□□ -2.37
KRT40Q6A162 SNORD2-201ENST00000459163 69 ntBASIC0.23□□□□□ -2.37
KRT40Q6A162 RNU6-539P-201ENST00000516665 103 ntBASIC0.23□□□□□ -2.37
KRT40Q6A162 RNU6-180P-201ENST00000516697 61 ntBASIC0.23□□□□□ -2.37
KRT40Q6A162 U2.7-201ENST00000619197 100 ntBASIC0.23□□□□□ -2.37
KRT40Q6A162 MIR6514-201ENST00000622549 70 ntBASIC0.23□□□□□ -2.37
KRT40Q6A162 U6.111-201ENST00000636093 83 ntBASIC0.23□□□□□ -2.37
KRT40Q6A162 SNORD115-25-201ENST00000362619 82 ntBASIC0.22□□□□□ -2.37
KRT40Q6A162 RNU6-668P-201ENST00000364180 107 ntBASIC0.22□□□□□ -2.37
KRT40Q6A162 Y_RNA.443-201ENST00000384135 111 ntBASIC0.22□□□□□ -2.37
KRT40Q6A162 RNA5SP163-201ENST00000410304 99 ntBASIC0.22□□□□□ -2.37
KRT40Q6A162 MIR4493-201ENST00000584016 73 ntBASIC0.22□□□□□ -2.37
KRT40Q6A162 Y_RNA.386-201ENST00000383913 105 ntBASIC0.21□□□□□ -2.38
KRT40Q6A162 MIR593-201ENST00000384856 100 ntBASIC0.21□□□□□ -2.38
KRT40Q6A162 AC139453.2-201ENST00000487255 133 ntBASIC0.21□□□□□ -2.38
KRT40Q6A162 RNU6-1089P-201ENST00000516473 104 ntBASIC0.21□□□□□ -2.38
KRT40Q6A162 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
KRT40Q6A162 MIRLET7B-201ENST00000385140 83 ntBASIC0.2□□□□□ -2.38
KRT40Q6A162 RNU6-630P-201ENST00000391258 106 ntBASIC0.2□□□□□ -2.38
KRT40Q6A162 CR383656.4-201ENST00000546909 122 ntBASIC0.2□□□□□ -2.38
KRT40Q6A162 CYP3A54P-201ENST00000566950 75 ntBASIC0.2□□□□□ -2.38
KRT40Q6A162 AC005520.4-201ENST00000604337 90 ntBASIC0.2□□□□□ -2.38
KRT40Q6A162 SNORD114-9-201ENST00000364370 72 ntBASIC0.19□□□□□ -2.38
KRT40Q6A162 MIR145-201ENST00000384967 88 ntBASIC0.19□□□□□ -2.38
KRT40Q6A162 SNORD114-31-201ENST00000363219 75 ntBASIC0.18□□□□□ -2.38
KRT40Q6A162 Y_RNA.375-201ENST00000365625 101 ntBASIC0.18□□□□□ -2.38
KRT40Q6A162 MIR610-201ENST00000385139 96 ntBASIC0.18□□□□□ -2.38
KRT40Q6A162 AP000676.1-201ENST00000533307 52 ntBASIC0.18□□□□□ -2.38
KRT40Q6A162 AP001180.6-201ENST00000584918 159 ntBASIC0.18□□□□□ -2.38
KRT40Q6A162 SNORD114-5-201ENST00000362928 70 ntBASIC0.17□□□□□ -2.38
KRT40Q6A162 MIR4743-201ENST00000584576 69 ntBASIC0.17□□□□□ -2.38
KRT40Q6A162 MIR6507-201ENST00000613630 70 ntBASIC0.17□□□□□ -2.38
KRT40Q6A162 RNU6-800P-201ENST00000384473 103 ntBASIC0.16□□□□□ -2.38
KRT40Q6A162 MIR604-201ENST00000384880 94 ntBASIC0.16□□□□□ -2.38
KRT40Q6A162 MIR1255B2-201ENST00000408618 67 ntBASIC0.16□□□□□ -2.38
KRT40Q6A162 RNU7-174P-201ENST00000516248 59 ntBASIC0.16□□□□□ -2.38
KRT40Q6A162 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.16□□□□□ -2.38
KRT40Q6A162 MIR148A-201ENST00000362215 68 ntBASIC0.15□□□□□ -2.39
KRT40Q6A162 SNORA25.4-201ENST00000363666 124 ntBASIC0.15□□□□□ -2.39
KRT40Q6A162 MIR892B-201ENST00000401279 77 ntBASIC0.15□□□□□ -2.39
KRT40Q6A162 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
KRT40Q6A162 RNU7-165P-201ENST00000458864 60 ntBASIC0.15□□□□□ -2.39
KRT40Q6A162 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
KRT40Q6A162 AC108676.2-201ENST00000605225 163 ntBASIC0.15□□□□□ -2.39
KRT40Q6A162 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
KRT40Q6A162 SNORD95.1-201ENST00000364099 68 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms