Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.19□□□□□ -2.22
RNFT1Q5M7Z0 RNU6-742P-201ENST00000365289 107 ntBASIC1.18□□□□□ -2.22
RNFT1Q5M7Z0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.18□□□□□ -2.22
RNFT1Q5M7Z0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
RNFT1Q5M7Z0 RNA5SP102-201ENST00000516865 106 ntBASIC1.17□□□□□ -2.22
RNFT1Q5M7Z0 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
RNFT1Q5M7Z0 SNORD115-23-201ENST00000364461 82 ntBASIC1.16□□□□□ -2.22
RNFT1Q5M7Z0 SNORA2A-201ENST00000383885 135 ntBASIC1.16□□□□□ -2.22
RNFT1Q5M7Z0 AC069271.1-201ENST00000445577 156 ntBASIC1.16□□□□□ -2.22
RNFT1Q5M7Z0 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
RNFT1Q5M7Z0 AC108676.2-201ENST00000605225 163 ntBASIC1.15□□□□□ -2.23
RNFT1Q5M7Z0 MIR96-201ENST00000362288 78 ntBASIC1.14□□□□□ -2.23
RNFT1Q5M7Z0 Y_RNA.139-201ENST00000363464 102 ntBASIC1.14□□□□□ -2.23
RNFT1Q5M7Z0 RNU6-1036P-201ENST00000383959 104 ntBASIC1.14□□□□□ -2.23
RNFT1Q5M7Z0 RNU6-42P-201ENST00000384165 107 ntBASIC1.14□□□□□ -2.23
RNFT1Q5M7Z0 RNU6-721P-201ENST00000410155 105 ntBASIC1.14□□□□□ -2.23
RNFT1Q5M7Z0 RNU6-1267P-201ENST00000410747 107 ntBASIC1.14□□□□□ -2.23
RNFT1Q5M7Z0 RNA5SP222-201ENST00000411039 105 ntBASIC1.14□□□□□ -2.23
RNFT1Q5M7Z0 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
RNFT1Q5M7Z0 RNA5SP517-201ENST00000364724 117 ntBASIC1.13□□□□□ -2.23
RNFT1Q5M7Z0 SNORD57-201ENST00000448188 72 ntBASIC1.13□□□□□ -2.23
RNFT1Q5M7Z0 RNA5SP220-201ENST00000516298 104 ntBASIC1.13□□□□□ -2.23
RNFT1Q5M7Z0 MIR4677-201ENST00000584153 80 ntBASIC1.13□□□□□ -2.23
RNFT1Q5M7Z0 RNU6-848P-201ENST00000515948 107 ntBASIC1.12□□□□□ -2.23
RNFT1Q5M7Z0 RNU6-617P-201ENST00000516147 107 ntBASIC1.12□□□□□ -2.23
RNFT1Q5M7Z0 RNU6-473P-201ENST00000516164 107 ntBASIC1.12□□□□□ -2.23
RNFT1Q5M7Z0 RNU6-1049P-201ENST00000516414 107 ntBASIC1.12□□□□□ -2.23
RNFT1Q5M7Z0 RNU6-229P-201ENST00000516614 102 ntBASIC1.12□□□□□ -2.23
RNFT1Q5M7Z0 MIR4452-201ENST00000583004 71 ntBASIC1.12□□□□□ -2.23
RNFT1Q5M7Z0 SNORD114-22-201ENST00000365423 72 ntBASIC1.11□□□□□ -2.23
RNFT1Q5M7Z0 MIR29B1-201ENST00000385015 81 ntBASIC1.11□□□□□ -2.23
RNFT1Q5M7Z0 MIR4432-201ENST00000581823 84 ntBASIC1.11□□□□□ -2.23
RNFT1Q5M7Z0 AL353765.1-201ENST00000605514 183 ntBASIC1.11□□□□□ -2.23
RNFT1Q5M7Z0 SNORD118-201ENST00000363593 134 ntBASIC1.1□□□□□ -2.23
RNFT1Q5M7Z0 MIR489-201ENST00000384923 84 ntBASIC1.1□□□□□ -2.23
RNFT1Q5M7Z0 Y_RNA.698-201ENST00000516798 118 ntBASIC1.1□□□□□ -2.23
RNFT1Q5M7Z0 AC084368.1-201ENST00000620935 65 ntBASIC1.1□□□□□ -2.23
RNFT1Q5M7Z0 SNORD114-27-201ENST00000363766 70 ntBASIC1.09□□□□□ -2.23
RNFT1Q5M7Z0 RNU6-59P-201ENST00000384787 107 ntBASIC1.09□□□□□ -2.23
RNFT1Q5M7Z0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
RNFT1Q5M7Z0 MIR140-201ENST00000385282 100 ntBASIC1.08□□□□□ -2.24
RNFT1Q5M7Z0 MIR501-201ENST00000390204 84 ntBASIC1.08□□□□□ -2.24
RNFT1Q5M7Z0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RNFT1Q5M7Z0 MIR548H4-201ENST00000408689 111 ntBASIC1.07□□□□□ -2.24
RNFT1Q5M7Z0 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
RNFT1Q5M7Z0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.07□□□□□ -2.24
RNFT1Q5M7Z0 SNORA25.18-201ENST00000607153 114 ntBASIC1.07□□□□□ -2.24
RNFT1Q5M7Z0 RN7SL660P-201ENST00000614852 299 ntBASIC1.07□□□□□ -2.24
RNFT1Q5M7Z0 MTRNR2L9-201ENST00000622562 75 ntBASIC1.07□□□□□ -2.24
RNFT1Q5M7Z0 SNORA40.8-201ENST00000411034 126 ntBASIC1.06□□□□□ -2.24
RNFT1Q5M7Z0 SNORD63.1-201ENST00000516178 80 ntBASIC1.06□□□□□ -2.24
RNFT1Q5M7Z0 ACA64.5-201ENST00000516207 127 ntBASIC1.06□□□□□ -2.24
RNFT1Q5M7Z0 RNU6-1232P-201ENST00000516299 86 ntBASIC1.06□□□□□ -2.24
RNFT1Q5M7Z0 U7.5-201ENST00000517224 61 ntBASIC1.06□□□□□ -2.24
RNFT1Q5M7Z0 RNU6-1174P-201ENST00000517278 101 ntBASIC1.06□□□□□ -2.24
RNFT1Q5M7Z0 MIR6734-201ENST00000621166 68 ntBASIC1.06□□□□□ -2.24
RNFT1Q5M7Z0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 RNU1-93P-201ENST00000364704 169 ntBASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 Y_RNA.321-201ENST00000365149 102 ntBASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 SNORA36.2-201ENST00000384004 127 ntBASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 Y_RNA.423-201ENST00000384057 113 ntBASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 RNU6-974P-201ENST00000384099 108 ntBASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 MIR106A-201ENST00000384870 81 ntBASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 MIR876-201ENST00000401147 81 ntBASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 MIR6767-201ENST00000637302 66 ntBASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
RNFT1Q5M7Z0 snoR1.1-201ENST00000628177 80 ntBASIC1.04□□□□□ -2.24
RNFT1Q5M7Z0 SNORA62.4-201ENST00000365504 151 ntBASIC1.02□□□□□ -2.25
RNFT1Q5M7Z0 SNORD71-201ENST00000411292 86 ntBASIC1.02□□□□□ -2.25
RNFT1Q5M7Z0 AC098934.3-201ENST00000430450 190 ntBASIC1.02□□□□□ -2.25
RNFT1Q5M7Z0 AP000676.1-201ENST00000533307 52 ntBASIC1.02□□□□□ -2.25
RNFT1Q5M7Z0 MIR4464-201ENST00000580818 92 ntBASIC1.02□□□□□ -2.25
RNFT1Q5M7Z0 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
RNFT1Q5M7Z0 AC104408.1-201ENST00000605241 170 ntBASIC1.02□□□□□ -2.25
RNFT1Q5M7Z0 MIR520E-201ENST00000384867 87 ntBASIC1.01□□□□□ -2.25
RNFT1Q5M7Z0 RNU7-88P-201ENST00000458752 63 ntBASIC1.01□□□□□ -2.25
RNFT1Q5M7Z0 SNORD63.2-201ENST00000516303 64 ntBASIC1.01□□□□□ -2.25
RNFT1Q5M7Z0 MIR6755-201ENST00000619993 66 ntBASIC1.01□□□□□ -2.25
RNFT1Q5M7Z0 MIR6888-201ENST00000621977 67 ntBASIC1.01□□□□□ -2.25
RNFT1Q5M7Z0 RNU6-1008P-201ENST00000384160 104 ntBASIC1□□□□□ -2.25
RNFT1Q5M7Z0 AC087343.1-201ENST00000477341 475 ntBASIC1□□□□□ -2.25
RNFT1Q5M7Z0 MIR3170-201ENST00000582699 77 ntBASIC1□□□□□ -2.25
RNFT1Q5M7Z0 AL445584.3-201ENST00000617173 78 ntBASIC1□□□□□ -2.25
RNFT1Q5M7Z0 MIR760-201ENST00000390220 80 ntBASIC0.99□□□□□ -2.25
RNFT1Q5M7Z0 MIR3925-201ENST00000584674 77 ntBASIC0.99□□□□□ -2.25
RNFT1Q5M7Z0 MIR518A1-201ENST00000385068 85 ntBASIC0.98□□□□□ -2.25
RNFT1Q5M7Z0 RNU6-530P-201ENST00000391180 107 ntBASIC0.98□□□□□ -2.25
RNFT1Q5M7Z0 RPS29P1-201ENST00000465274 159 ntBASIC0.98□□□□□ -2.25
RNFT1Q5M7Z0 RNA5SP128-201ENST00000365305 116 ntBASIC0.97□□□□□ -2.25
RNFT1Q5M7Z0 Y_RNA.613-201ENST00000410726 97 ntBASIC0.97□□□□□ -2.25
RNFT1Q5M7Z0 RNU6-894P-201ENST00000517094 105 ntBASIC0.97□□□□□ -2.25
RNFT1Q5M7Z0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.97□□□□□ -2.25
RNFT1Q5M7Z0 AL590095.2-201ENST00000604136 117 ntBASIC0.96□□□□□ -2.26
RNFT1Q5M7Z0 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
RNFT1Q5M7Z0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
RNFT1Q5M7Z0 RNU6-1111P-201ENST00000391118 107 ntBASIC0.95□□□□□ -2.26
RNFT1Q5M7Z0 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
RNFT1Q5M7Z0 RNA5SP98-201ENST00000363158 137 ntBASIC0.94□□□□□ -2.26
RNFT1Q5M7Z0 RNU6-1326P-201ENST00000391262 107 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms