Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RNU6-340P-201ENST00000364005 107 ntBASIC-0.83□□□□□ -2.54
CCDC38Q502W7 RNU6-219P-201ENST00000364728 107 ntBASIC-0.83□□□□□ -2.54
CCDC38Q502W7 RNU6-44P-201ENST00000384045 107 ntBASIC-0.83□□□□□ -2.54
CCDC38Q502W7 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.83□□□□□ -2.54
CCDC38Q502W7 RNA5SP147-201ENST00000516493 109 ntBASIC-0.83□□□□□ -2.54
CCDC38Q502W7 MIR488-201ENST00000365739 83 ntBASIC-0.84□□□□□ -2.54
CCDC38Q502W7 RNU6-402P-201ENST00000410678 103 ntBASIC-0.84□□□□□ -2.54
CCDC38Q502W7 SNORA13-201ENST00000458790 133 ntBASIC-0.84□□□□□ -2.54
CCDC38Q502W7 SNORD115-23-201ENST00000364461 82 ntBASIC-0.85□□□□□ -2.55
CCDC38Q502W7 SNORD38.3-201ENST00000516599 73 ntBASIC-0.85□□□□□ -2.55
CCDC38Q502W7 RNU6-624P-201ENST00000363411 107 ntBASIC-0.86□□□□□ -2.55
CCDC38Q502W7 YWHAEP3-201ENST00000582767 121 ntBASIC-0.86□□□□□ -2.55
CCDC38Q502W7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
CCDC38Q502W7 MIR6854-201ENST00000614935 69 ntBASIC-0.86□□□□□ -2.55
CCDC38Q502W7 RNA5SP169-201ENST00000517268 117 ntBASIC-0.87□□□□□ -2.55
CCDC38Q502W7 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.88□□□□□ -2.55
CCDC38Q502W7 SNORD114-14-201ENST00000362723 75 ntBASIC-0.88□□□□□ -2.55
CCDC38Q502W7 RNU6-497P-201ENST00000365316 104 ntBASIC-0.88□□□□□ -2.55
CCDC38Q502W7 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.88□□□□□ -2.55
CCDC38Q502W7 AC140658.3-201ENST00000567603 271 ntBASIC-0.88□□□□□ -2.55
CCDC38Q502W7 MIR5704-201ENST00000584029 77 ntBASIC-0.88□□□□□ -2.55
CCDC38Q502W7 SNORD57-201ENST00000448188 72 ntBASIC-0.89□□□□□ -2.55
CCDC38Q502W7 AC021146.6-201ENST00000514659 117 ntBASIC-0.89□□□□□ -2.55
CCDC38Q502W7 RNU6-267P-201ENST00000516714 103 ntBASIC-0.89□□□□□ -2.55
CCDC38Q502W7 AL627230.5-201ENST00000619807 58 ntBASIC-0.89□□□□□ -2.55
CCDC38Q502W7 MIR548BB-201ENST00000626714 66 ntBASIC-0.89□□□□□ -2.55
CCDC38Q502W7 MIR409-201ENST00000362237 79 ntBASIC-0.9□□□□□ -2.55
CCDC38Q502W7 SNORA33.1-201ENST00000364957 130 ntBASIC-0.9□□□□□ -2.55
CCDC38Q502W7 MIR518B-201ENST00000385127 83 ntBASIC-0.91□□□□□ -2.56
CCDC38Q502W7 RNU6-168P-201ENST00000516189 101 ntBASIC-0.91□□□□□ -2.56
CCDC38Q502W7 RNY1P7-201ENST00000384743 110 ntBASIC-0.92□□□□□ -2.56
CCDC38Q502W7 MIR521-2-201ENST00000384818 87 ntBASIC-0.92□□□□□ -2.56
CCDC38Q502W7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.92□□□□□ -2.56
CCDC38Q502W7 RNU6-844P-201ENST00000517175 102 ntBASIC-0.92□□□□□ -2.56
CCDC38Q502W7 AC090617.8-201ENST00000623339 167 ntBASIC-0.92□□□□□ -2.56
CCDC38Q502W7 SNORA62.4-201ENST00000365504 151 ntBASIC-0.93□□□□□ -2.56
CCDC38Q502W7 RNU6-675P-201ENST00000384236 104 ntBASIC-0.93□□□□□ -2.56
CCDC38Q502W7 SNORA3B-201ENST00000391305 131 ntBASIC-0.93□□□□□ -2.56
CCDC38Q502W7 RNU6-557P-201ENST00000516842 110 ntBASIC-0.93□□□□□ -2.56
CCDC38Q502W7 SNORD74.6-201ENST00000364796 70 ntBASIC-0.94□□□□□ -2.56
CCDC38Q502W7 RNA5SP470-201ENST00000516463 106 ntBASIC-0.94□□□□□ -2.56
CCDC38Q502W7 MIR6739-201ENST00000622461 75 ntBASIC-0.94□□□□□ -2.56
CCDC38Q502W7 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.95□□□□□ -2.56
CCDC38Q502W7 RNY1P9-201ENST00000532431 109 ntBASIC-0.95□□□□□ -2.56
CCDC38Q502W7 RNA5SP89-201ENST00000410300 108 ntBASIC-0.96□□□□□ -2.56
CCDC38Q502W7 MIR8068-201ENST00000618032 68 ntBASIC-0.96□□□□□ -2.56
CCDC38Q502W7 CYP3A54P-201ENST00000566950 75 ntBASIC-0.98□□□□□ -2.57
CCDC38Q502W7 MIR3179-1-201ENST00000578940 84 ntBASIC-0.98□□□□□ -2.57
CCDC38Q502W7 MIR3179-2-201ENST00000579107 84 ntBASIC-0.98□□□□□ -2.57
CCDC38Q502W7 MIR3179-3-201ENST00000579566 84 ntBASIC-0.98□□□□□ -2.57
CCDC38Q502W7 MIR3179-4-201ENST00000617599 84 ntBASIC-0.98□□□□□ -2.57
CCDC38Q502W7 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.99□□□□□ -2.57
CCDC38Q502W7 MIR1255B2-201ENST00000408618 67 ntBASIC-0.99□□□□□ -2.57
CCDC38Q502W7 SNORD22.1-201ENST00000516331 125 ntBASIC-0.99□□□□□ -2.57
CCDC38Q502W7 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.99□□□□□ -2.57
CCDC38Q502W7 AL353803.5-201ENST00000599815 141 ntBASIC-0.99□□□□□ -2.57
CCDC38Q502W7 Y_RNA.17-201ENST00000362433 111 ntBASIC-1□□□□□ -2.57
CCDC38Q502W7 RNU6-686P-201ENST00000364839 107 ntBASIC-1□□□□□ -2.57
CCDC38Q502W7 RNA5SP266-201ENST00000410273 108 ntBASIC-1□□□□□ -2.57
CCDC38Q502W7 RNU6-303P-201ENST00000517091 106 ntBASIC-1.01□□□□□ -2.57
CCDC38Q502W7 AC006160.2-201ENST00000637708 154 ntBASIC-1.01□□□□□ -2.57
CCDC38Q502W7 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.02□□□□□ -2.57
CCDC38Q502W7 RNU6-153P-201ENST00000364422 104 ntBASIC-1.03□□□□□ -2.57
CCDC38Q502W7 RNA5SP331-201ENST00000364986 107 ntBASIC-1.03□□□□□ -2.57
CCDC38Q502W7 RNU6-129P-201ENST00000391022 107 ntBASIC-1.03□□□□□ -2.57
CCDC38Q502W7 MIR4436A-201ENST00000585278 85 ntBASIC-1.03□□□□□ -2.57
CCDC38Q502W7 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.04□□□□□ -2.58
CCDC38Q502W7 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.04□□□□□ -2.58
CCDC38Q502W7 RNU6-49P-201ENST00000384256 107 ntBASIC-1.05□□□□□ -2.58
CCDC38Q502W7 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.05□□□□□ -2.58
CCDC38Q502W7 RNU6-721P-201ENST00000410155 105 ntBASIC-1.06□□□□□ -2.58
CCDC38Q502W7 IGLL4P-201ENST00000614590 133 ntBASIC-1.06□□□□□ -2.58
CCDC38Q502W7 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.07□□□□□ -2.58
CCDC38Q502W7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.07□□□□□ -2.58
CCDC38Q502W7 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.07□□□□□ -2.58
CCDC38Q502W7 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.07□□□□□ -2.58
CCDC38Q502W7 MIR3675-201ENST00000583661 73 ntBASIC-1.07□□□□□ -2.58
CCDC38Q502W7 RNU6-478P-201ENST00000363904 110 ntBASIC-1.08□□□□□ -2.58
CCDC38Q502W7 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.08□□□□□ -2.58
CCDC38Q502W7 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.08□□□□□ -2.58
CCDC38Q502W7 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.08□□□□□ -2.58
CCDC38Q502W7 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.08□□□□□ -2.58
CCDC38Q502W7 AC074348.1-201ENST00000426503 132 ntBASIC-1.08□□□□□ -2.58
CCDC38Q502W7 AC022137.1-201ENST00000483735 151 ntBASIC-1.08□□□□□ -2.58
CCDC38Q502W7 RNU6-881P-201ENST00000516813 102 ntBASIC-1.08□□□□□ -2.58
CCDC38Q502W7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.08□□□□□ -2.58
CCDC38Q502W7 RNY1P1-201ENST00000364372 112 ntBASIC-1.09□□□□□ -2.58
CCDC38Q502W7 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.09□□□□□ -2.58
CCDC38Q502W7 RNU6-380P-201ENST00000410207 107 ntBASIC-1.09□□□□□ -2.58
CCDC38Q502W7 AP000533.3-201ENST00000447704 118 ntBASIC-1.09□□□□□ -2.58
CCDC38Q502W7 RNU7-154P-201ENST00000516194 62 ntBASIC-1.09□□□□□ -2.58
CCDC38Q502W7 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.1□□□□□ -2.59
CCDC38Q502W7 MIR124-2-201ENST00000385081 109 ntBASIC-1.1□□□□□ -2.59
CCDC38Q502W7 SNORD18.2-201ENST00000459604 70 ntBASIC-1.1□□□□□ -2.59
CCDC38Q502W7 MIR4464-201ENST00000580818 92 ntBASIC-1.1□□□□□ -2.59
CCDC38Q502W7 RNY4P30-201ENST00000410216 95 ntBASIC-1.11□□□□□ -2.59
CCDC38Q502W7 RNU6-656P-201ENST00000516785 107 ntBASIC-1.11□□□□□ -2.59
CCDC38Q502W7 MIR1297-201ENST00000637311 77 ntBASIC-1.11□□□□□ -2.59
CCDC38Q502W7 SNORA8.1-201ENST00000384250 140 ntBASIC-1.12□□□□□ -2.59
CCDC38Q502W7 MIR587-201ENST00000384845 96 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms