Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RNU6-1049P-201ENST00000516414 107 ntBASIC0.81□□□□□ -2.28
SOX4Q06945 MIR4677-201ENST00000584153 80 ntBASIC0.81□□□□□ -2.28
SOX4Q06945 MIR216A-201ENST00000385063 110 ntBASIC0.8□□□□□ -2.28
SOX4Q06945 MIR501-201ENST00000390204 84 ntBASIC0.8□□□□□ -2.28
SOX4Q06945 Y_RNA.236-201ENST00000364427 111 ntBASIC0.79□□□□□ -2.28
SOX4Q06945 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
SOX4Q06945 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.79□□□□□ -2.28
SOX4Q06945 AL021921.1-201ENST00000442774 93 ntBASIC0.79□□□□□ -2.28
SOX4Q06945 AL627230.5-201ENST00000619807 58 ntBASIC0.79□□□□□ -2.28
SOX4Q06945 RNU6-446P-201ENST00000362827 106 ntBASIC0.78□□□□□ -2.28
SOX4Q06945 Y_RNA.325-201ENST00000365171 122 ntBASIC0.78□□□□□ -2.28
SOX4Q06945 MIR193B-201ENST00000384907 83 ntBASIC0.78□□□□□ -2.28
SOX4Q06945 MIR760-201ENST00000390220 80 ntBASIC0.78□□□□□ -2.28
SOX4Q06945 MIR1255B2-201ENST00000408618 67 ntBASIC0.78□□□□□ -2.28
SOX4Q06945 RNU6-518P-201ENST00000516056 96 ntBASIC0.78□□□□□ -2.28
SOX4Q06945 RNU6-175P-201ENST00000516896 107 ntBASIC0.78□□□□□ -2.28
SOX4Q06945 AC084368.1-201ENST00000620935 65 ntBASIC0.78□□□□□ -2.28
SOX4Q06945 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
SOX4Q06945 AC243829.3-201ENST00000622177 108 ntBASIC0.78□□□□□ -2.28
SOX4Q06945 RNA5SP62-201ENST00000363457 110 ntBASIC0.77□□□□□ -2.29
SOX4Q06945 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
SOX4Q06945 MIR1273G-201ENST00000577677 100 ntBASIC0.77□□□□□ -2.29
SOX4Q06945 MIR548AD-201ENST00000584780 82 ntBASIC0.77□□□□□ -2.29
SOX4Q06945 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
SOX4Q06945 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
SOX4Q06945 SNORA9.1-201ENST00000362412 131 ntBASIC0.76□□□□□ -2.29
SOX4Q06945 SNORA49-201ENST00000386157 136 ntBASIC0.76□□□□□ -2.29
SOX4Q06945 RNU6-337P-201ENST00000391243 106 ntBASIC0.76□□□□□ -2.29
SOX4Q06945 Y_RNA.115-201ENST00000363272 98 ntBASIC0.75□□□□□ -2.29
SOX4Q06945 RNU6-35P-201ENST00000384530 107 ntBASIC0.75□□□□□ -2.29
SOX4Q06945 RNU6-1246P-201ENST00000391064 107 ntBASIC0.75□□□□□ -2.29
SOX4Q06945 MIR6773-201ENST00000612812 74 ntBASIC0.75□□□□□ -2.29
SOX4Q06945 RNA5SP128-201ENST00000365305 116 ntBASIC0.74□□□□□ -2.29
SOX4Q06945 MIR519A2-201ENST00000384990 87 ntBASIC0.74□□□□□ -2.29
SOX4Q06945 MIR6086-201ENST00000638065 55 ntBASIC0.74□□□□□ -2.29
SOX4Q06945 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SOX4Q06945 RNU6-1036P-201ENST00000383959 104 ntBASIC0.73□□□□□ -2.29
SOX4Q06945 SNORA41B-201ENST00000384785 128 ntBASIC0.73□□□□□ -2.29
SOX4Q06945 MIR499B-201ENST00000636498 73 ntBASIC0.73□□□□□ -2.29
SOX4Q06945 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SOX4Q06945 Y_RNA.74-201ENST00000362911 99 ntBASIC0.72□□□□□ -2.29
SOX4Q06945 RNA5SP257-201ENST00000363023 116 ntBASIC0.72□□□□□ -2.29
SOX4Q06945 SNORD44.1-201ENST00000363202 61 ntBASIC0.72□□□□□ -2.29
SOX4Q06945 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
SOX4Q06945 RNU6-141P-201ENST00000410499 105 ntBASIC0.72□□□□□ -2.29
SOX4Q06945 RNU6-863P-201ENST00000515989 104 ntBASIC0.72□□□□□ -2.29
SOX4Q06945 MIR3925-201ENST00000584674 77 ntBASIC0.72□□□□□ -2.29
SOX4Q06945 RN7SL660P-201ENST00000614852 299 ntBASIC0.72□□□□□ -2.29
SOX4Q06945 MIR924-201ENST00000638017 53 ntBASIC0.72□□□□□ -2.29
SOX4Q06945 RNU6-945P-201ENST00000383947 107 ntBASIC0.71□□□□□ -2.3
SOX4Q06945 RNU7-129P-201ENST00000516128 62 ntBASIC0.7□□□□□ -2.3
SOX4Q06945 RNU6-502P-201ENST00000362419 108 ntBASIC0.68□□□□□ -2.3
SOX4Q06945 SNORD115-25-201ENST00000362619 82 ntBASIC0.68□□□□□ -2.3
SOX4Q06945 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
SOX4Q06945 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
SOX4Q06945 MIRLET7B-201ENST00000385140 83 ntBASIC0.67□□□□□ -2.3
SOX4Q06945 MIR527-201ENST00000385244 85 ntBASIC0.67□□□□□ -2.3
SOX4Q06945 MIR876-201ENST00000401147 81 ntBASIC0.67□□□□□ -2.3
SOX4Q06945 RNA5SP470-201ENST00000516463 106 ntBASIC0.67□□□□□ -2.3
SOX4Q06945 SNORD113-4-201ENST00000364802 75 ntBASIC0.66□□□□□ -2.3
SOX4Q06945 RNU7-154P-201ENST00000516194 62 ntBASIC0.66□□□□□ -2.3
SOX4Q06945 RNU6-782P-201ENST00000516852 104 ntBASIC0.66□□□□□ -2.3
SOX4Q06945 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.66□□□□□ -2.3
SOX4Q06945 MIR6513-201ENST00000621188 64 ntBASIC0.66□□□□□ -2.3
SOX4Q06945 Y_RNA.282-201ENST00000364793 102 ntBASIC0.65□□□□□ -2.31
SOX4Q06945 RNU6-520P-201ENST00000384717 104 ntBASIC0.65□□□□□ -2.31
SOX4Q06945 SCARNA11.2-201ENST00000517183 154 ntBASIC0.65□□□□□ -2.31
SOX4Q06945 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
SOX4Q06945 SNORD116-16-201ENST00000384533 92 ntBASIC0.64□□□□□ -2.31
SOX4Q06945 MIR548AG1-201ENST00000579932 66 ntBASIC0.64□□□□□ -2.31
SOX4Q06945 MIR103A1-201ENST00000362165 78 ntBASIC0.63□□□□□ -2.31
SOX4Q06945 SNORA68.3-201ENST00000515906 83 ntBASIC0.63□□□□□ -2.31
SOX4Q06945 RNA5SP330-201ENST00000517096 96 ntBASIC0.63□□□□□ -2.31
SOX4Q06945 AC010487.4-201ENST00000637027 61 ntBASIC0.63□□□□□ -2.31
SOX4Q06945 MIR936-201ENST00000401264 98 ntBASIC0.62□□□□□ -2.31
SOX4Q06945 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
SOX4Q06945 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.62□□□□□ -2.31
SOX4Q06945 MIR8087-201ENST00000612745 78 ntBASIC0.62□□□□□ -2.31
SOX4Q06945 MIR7978-201ENST00000636158 59 ntBASIC0.62□□□□□ -2.31
SOX4Q06945 SNORD114-23-201ENST00000363536 72 ntBASIC0.61□□□□□ -2.31
SOX4Q06945 MIR106A-201ENST00000384870 81 ntBASIC0.61□□□□□ -2.31
SOX4Q06945 RNU7-119P-201ENST00000459279 63 ntBASIC0.61□□□□□ -2.31
SOX4Q06945 AP000676.1-201ENST00000533307 52 ntBASIC0.61□□□□□ -2.31
SOX4Q06945 RNU6-1312P-201ENST00000362425 108 ntBASIC0.6□□□□□ -2.31
SOX4Q06945 RNU6-231P-201ENST00000517122 103 ntBASIC0.6□□□□□ -2.31
SOX4Q06945 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.59□□□□□ -2.31
SOX4Q06945 snoU13.19-201ENST00000459148 104 ntBASIC0.59□□□□□ -2.31
SOX4Q06945 Y_RNA.722-201ENST00000517279 114 ntBASIC0.59□□□□□ -2.31
SOX4Q06945 MIRLET7D-201ENST00000362263 87 ntBASIC0.58□□□□□ -2.32
SOX4Q06945 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
SOX4Q06945 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.58□□□□□ -2.32
SOX4Q06945 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
SOX4Q06945 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.58□□□□□ -2.32
SOX4Q06945 RNU6-30P-201ENST00000384561 107 ntBASIC0.57□□□□□ -2.32
SOX4Q06945 RNU6-246P-201ENST00000384702 107 ntBASIC0.57□□□□□ -2.32
SOX4Q06945 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
SOX4Q06945 RNU6-127P-201ENST00000390897 107 ntBASIC0.57□□□□□ -2.32
SOX4Q06945 RNU6-936P-201ENST00000384005 107 ntBASIC0.56□□□□□ -2.32
SOX4Q06945 RNU6-815P-201ENST00000384080 113 ntBASIC0.56□□□□□ -2.32
SOX4Q06945 RNA5SP285-201ENST00000516619 119 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 252.5 ms