Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 RNU1-29P-201ENST00000606574 126 ntBASIC1.28□□□□□ -2.2
SKOR1P84550 SNORD1B-201ENST00000363091 84 ntBASIC1.27□□□□□ -2.21
SKOR1P84550 AL353765.1-201ENST00000605514 183 ntBASIC1.27□□□□□ -2.21
SKOR1P84550 RNA5SP457-201ENST00000363657 124 ntBASIC1.26□□□□□ -2.21
SKOR1P84550 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
SKOR1P84550 Y_RNA.115-201ENST00000363272 98 ntBASIC1.25□□□□□ -2.21
SKOR1P84550 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.24□□□□□ -2.21
SKOR1P84550 Y_RNA.109-201ENST00000363215 102 ntBASIC1.24□□□□□ -2.21
SKOR1P84550 SNORA2A-201ENST00000383885 135 ntBASIC1.24□□□□□ -2.21
SKOR1P84550 MIR548F3-201ENST00000408509 87 ntBASIC1.24□□□□□ -2.21
SKOR1P84550 AC069271.1-201ENST00000445577 156 ntBASIC1.24□□□□□ -2.21
SKOR1P84550 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
SKOR1P84550 RNA5SP517-201ENST00000364724 117 ntBASIC1.23□□□□□ -2.21
SKOR1P84550 RNY1P8-201ENST00000383970 114 ntBASIC1.23□□□□□ -2.21
SKOR1P84550 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
SKOR1P84550 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SKOR1P84550 MIR193B-201ENST00000384907 83 ntBASIC1.22□□□□□ -2.21
SKOR1P84550 MIRLET7B-201ENST00000385140 83 ntBASIC1.22□□□□□ -2.21
SKOR1P84550 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.22□□□□□ -2.21
SKOR1P84550 RNU7-188P-201ENST00000517063 64 ntBASIC1.22□□□□□ -2.21
SKOR1P84550 RNU6-838P-201ENST00000363399 108 ntBASIC1.21□□□□□ -2.22
SKOR1P84550 RNU6-458P-201ENST00000384179 107 ntBASIC1.21□□□□□ -2.22
SKOR1P84550 SNORA49-201ENST00000386157 136 ntBASIC1.21□□□□□ -2.22
SKOR1P84550 RNU6-419P-201ENST00000517030 63 ntBASIC1.21□□□□□ -2.22
SKOR1P84550 U6.58-201ENST00000613107 107 ntBASIC1.21□□□□□ -2.22
SKOR1P84550 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.21□□□□□ -2.22
SKOR1P84550 SNORA36.2-201ENST00000384004 127 ntBASIC1.2□□□□□ -2.22
SKOR1P84550 MIR140-201ENST00000385282 100 ntBASIC1.2□□□□□ -2.22
SKOR1P84550 RNU6-229P-201ENST00000516614 102 ntBASIC1.2□□□□□ -2.22
SKOR1P84550 MIR1273G-201ENST00000577677 100 ntBASIC1.2□□□□□ -2.22
SKOR1P84550 MIR548AG1-201ENST00000579932 66 ntBASIC1.2□□□□□ -2.22
SKOR1P84550 SNORD118-201ENST00000363593 134 ntBASIC1.19□□□□□ -2.22
SKOR1P84550 RNU6-848P-201ENST00000515948 107 ntBASIC1.19□□□□□ -2.22
SKOR1P84550 RNU6-617P-201ENST00000516147 107 ntBASIC1.19□□□□□ -2.22
SKOR1P84550 RNU6-473P-201ENST00000516164 107 ntBASIC1.19□□□□□ -2.22
SKOR1P84550 RNU6-1049P-201ENST00000516414 107 ntBASIC1.19□□□□□ -2.22
SKOR1P84550 RNU7-160P-201ENST00000516660 62 ntBASIC1.19□□□□□ -2.22
SKOR1P84550 RNU6-502P-201ENST00000362419 108 ntBASIC1.18□□□□□ -2.22
SKOR1P84550 RNA5SP257-201ENST00000363023 116 ntBASIC1.18□□□□□ -2.22
SKOR1P84550 MIR4490-201ENST00000582647 84 ntBASIC1.18□□□□□ -2.22
SKOR1P84550 MIR4661-201ENST00000582720 75 ntBASIC1.18□□□□□ -2.22
SKOR1P84550 SNORA40.8-201ENST00000411034 126 ntBASIC1.17□□□□□ -2.22
SKOR1P84550 RNU6-175P-201ENST00000516896 107 ntBASIC1.17□□□□□ -2.22
SKOR1P84550 AC103810.9-201ENST00000606688 112 ntBASIC1.17□□□□□ -2.22
SKOR1P84550 SNORA25.18-201ENST00000607153 114 ntBASIC1.17□□□□□ -2.22
SKOR1P84550 RNU6-247P-201ENST00000362636 107 ntBASIC1.16□□□□□ -2.22
SKOR1P84550 AC098934.3-201ENST00000430450 190 ntBASIC1.16□□□□□ -2.22
SKOR1P84550 RNU6-782P-201ENST00000516852 104 ntBASIC1.16□□□□□ -2.22
SKOR1P84550 SNORD71-201ENST00000411292 86 ntBASIC1.15□□□□□ -2.23
SKOR1P84550 MIR5000-201ENST00000577717 103 ntBASIC1.15□□□□□ -2.23
SKOR1P84550 MIR4677-201ENST00000584153 80 ntBASIC1.15□□□□□ -2.23
SKOR1P84550 MIR6086-201ENST00000638065 55 ntBASIC1.15□□□□□ -2.23
SKOR1P84550 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
SKOR1P84550 AL590095.2-201ENST00000604136 117 ntBASIC1.14□□□□□ -2.23
SKOR1P84550 AC084368.1-201ENST00000620935 65 ntBASIC1.14□□□□□ -2.23
SKOR1P84550 RNU6-1036P-201ENST00000383959 104 ntBASIC1.13□□□□□ -2.23
SKOR1P84550 Y_RNA.423-201ENST00000384057 113 ntBASIC1.13□□□□□ -2.23
SKOR1P84550 AL627230.5-201ENST00000619807 58 ntBASIC1.13□□□□□ -2.23
SKOR1P84550 RNU6-1206P-201ENST00000516339 103 ntBASIC1.11□□□□□ -2.23
SKOR1P84550 RNA5SP121-201ENST00000516537 101 ntBASIC1.11□□□□□ -2.23
SKOR1P84550 RNA5SP330-201ENST00000517096 96 ntBASIC1.11□□□□□ -2.23
SKOR1P84550 MIR501-201ENST00000390204 84 ntBASIC1.1□□□□□ -2.23
SKOR1P84550 AL353803.5-201ENST00000599815 141 ntBASIC1.1□□□□□ -2.23
SKOR1P84550 MIR545-201ENST00000385085 106 ntBASIC1.09□□□□□ -2.23
SKOR1P84550 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
SKOR1P84550 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SKOR1P84550 RNU6-598P-201ENST00000364017 105 ntBASIC1.08□□□□□ -2.24
SKOR1P84550 MIR518A1-201ENST00000385068 85 ntBASIC1.08□□□□□ -2.24
SKOR1P84550 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
SKOR1P84550 RNU6-1232P-201ENST00000516299 86 ntBASIC1.08□□□□□ -2.24
SKOR1P84550 MIR373-201ENST00000362273 69 ntBASIC1.07□□□□□ -2.24
SKOR1P84550 MIR608-201ENST00000384820 100 ntBASIC1.07□□□□□ -2.24
SKOR1P84550 MIR579-201ENST00000385221 98 ntBASIC1.07□□□□□ -2.24
SKOR1P84550 RNU7-151P-201ENST00000516930 53 ntBASIC1.07□□□□□ -2.24
SKOR1P84550 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
SKOR1P84550 Y_RNA.69-201ENST00000362885 109 ntBASIC1.06□□□□□ -2.24
SKOR1P84550 RNU6-995P-201ENST00000391244 107 ntBASIC1.06□□□□□ -2.24
SKOR1P84550 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.06□□□□□ -2.24
SKOR1P84550 MIR924-201ENST00000638017 53 ntBASIC1.06□□□□□ -2.24
SKOR1P84550 SNORD115-23-201ENST00000364461 82 ntBASIC1.05□□□□□ -2.24
SKOR1P84550 MIR548AA1-201ENST00000384971 97 ntBASIC1.05□□□□□ -2.24
SKOR1P84550 MIR760-201ENST00000390220 80 ntBASIC1.05□□□□□ -2.24
SKOR1P84550 MIR876-201ENST00000401147 81 ntBASIC1.05□□□□□ -2.24
SKOR1P84550 MIR6755-201ENST00000619993 66 ntBASIC1.05□□□□□ -2.24
SKOR1P84550 RNU6-110P-201ENST00000384508 104 ntBASIC1.04□□□□□ -2.24
SKOR1P84550 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.04□□□□□ -2.24
SKOR1P84550 RN7SL660P-201ENST00000614852 299 ntBASIC1.04□□□□□ -2.24
SKOR1P84550 U2.18-201ENST00000622185 84 ntBASIC1.04□□□□□ -2.24
SKOR1P84550 RNU6-828P-201ENST00000364876 107 ntBASIC1.03□□□□□ -2.24
SKOR1P84550 MIR106A-201ENST00000384870 81 ntBASIC1.03□□□□□ -2.24
SKOR1P84550 MIR329-2-201ENST00000385029 84 ntBASIC1.03□□□□□ -2.24
SKOR1P84550 AC108676.2-201ENST00000605225 163 ntBASIC1.03□□□□□ -2.24
SKOR1P84550 RNU6-924P-201ENST00000362926 108 ntBASIC1.02□□□□□ -2.25
SKOR1P84550 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
SKOR1P84550 RNA5SP128-201ENST00000365305 116 ntBASIC1.02□□□□□ -2.25
SKOR1P84550 RNU6-696P-201ENST00000390834 107 ntBASIC1.02□□□□□ -2.25
SKOR1P84550 RNU6-863P-201ENST00000515989 104 ntBASIC1.02□□□□□ -2.25
SKOR1P84550 RNU6-1262P-201ENST00000516217 96 ntBASIC1.02□□□□□ -2.25
SKOR1P84550 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
SKOR1P84550 snoR1.1-201ENST00000628177 80 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms