Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.08□□□□□ -2.58
CX3CR1P49238 SNORD63.1-201ENST00000516178 80 ntBASIC-1.08□□□□□ -2.58
CX3CR1P49238 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.08□□□□□ -2.58
CX3CR1P49238 MIR4668-201ENST00000582284 70 ntBASIC-1.08□□□□□ -2.58
CX3CR1P49238 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.08□□□□□ -2.58
CX3CR1P49238 RNA5SP368-201ENST00000364298 116 ntBASIC-1.09□□□□□ -2.58
CX3CR1P49238 SNORD115-22-201ENST00000364456 82 ntBASIC-1.09□□□□□ -2.58
CX3CR1P49238 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.09□□□□□ -2.58
CX3CR1P49238 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.09□□□□□ -2.58
CX3CR1P49238 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.09□□□□□ -2.58
CX3CR1P49238 RNU6-924P-201ENST00000362926 108 ntBASIC-1.1□□□□□ -2.59
CX3CR1P49238 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.1□□□□□ -2.59
CX3CR1P49238 RNU4-63P-201ENST00000411313 118 ntBASIC-1.1□□□□□ -2.59
CX3CR1P49238 RNU6-834P-201ENST00000362367 110 ntBASIC-1.11□□□□□ -2.59
CX3CR1P49238 RNU6-330P-201ENST00000363015 107 ntBASIC-1.11□□□□□ -2.59
CX3CR1P49238 RNU6-624P-201ENST00000363411 107 ntBASIC-1.11□□□□□ -2.59
CX3CR1P49238 RNU6-219P-201ENST00000364728 107 ntBASIC-1.11□□□□□ -2.59
CX3CR1P49238 RNU6-497P-201ENST00000365316 104 ntBASIC-1.11□□□□□ -2.59
CX3CR1P49238 SNORA26.4-201ENST00000391188 123 ntBASIC-1.11□□□□□ -2.59
CX3CR1P49238 Z95118.1-201ENST00000421372 247 ntBASIC-1.11□□□□□ -2.59
CX3CR1P49238 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.11□□□□□ -2.59
CX3CR1P49238 RNU6-267P-201ENST00000516714 103 ntBASIC-1.11□□□□□ -2.59
CX3CR1P49238 U2.7-201ENST00000619197 100 ntBASIC-1.11□□□□□ -2.59
CX3CR1P49238 SNORD95.1-201ENST00000364099 68 ntBASIC-1.12□□□□□ -2.59
CX3CR1P49238 RNU6-681P-201ENST00000364012 104 ntBASIC-1.13□□□□□ -2.59
CX3CR1P49238 RNU6-246P-201ENST00000384702 107 ntBASIC-1.13□□□□□ -2.59
CX3CR1P49238 RNY4P18-201ENST00000391107 89 ntBASIC-1.13□□□□□ -2.59
CX3CR1P49238 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.14□□□□□ -2.59
CX3CR1P49238 AL021921.1-201ENST00000442774 93 ntBASIC-1.14□□□□□ -2.59
CX3CR1P49238 RNU7-134P-201ENST00000458997 64 ntBASIC-1.14□□□□□ -2.59
CX3CR1P49238 snoU83B.1-201ENST00000517136 88 ntBASIC-1.14□□□□□ -2.59
CX3CR1P49238 AP001318.4-201ENST00000616637 121 ntBASIC-1.14□□□□□ -2.59
CX3CR1P49238 SNORD115-33-201ENST00000363723 82 ntBASIC-1.15□□□□□ -2.59
CX3CR1P49238 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.15□□□□□ -2.59
CX3CR1P49238 RNU6-402P-201ENST00000410678 103 ntBASIC-1.15□□□□□ -2.59
CX3CR1P49238 AL031737.1-201ENST00000450125 223 ntBASIC-1.15□□□□□ -2.59
CX3CR1P49238 AC093729.1-201ENST00000513074 128 ntBASIC-1.15□□□□□ -2.59
CX3CR1P49238 MALAT1.1-201ENST00000618249 95 ntBASIC-1.15□□□□□ -2.59
CX3CR1P49238 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.16□□□□□ -2.6
CX3CR1P49238 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.16□□□□□ -2.6
CX3CR1P49238 RNU6-645P-201ENST00000364649 106 ntBASIC-1.16□□□□□ -2.6
CX3CR1P49238 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.16□□□□□ -2.6
CX3CR1P49238 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.16□□□□□ -2.6
CX3CR1P49238 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.16□□□□□ -2.6
CX3CR1P49238 MIR548M-201ENST00000408260 86 ntBASIC-1.16□□□□□ -2.6
CX3CR1P49238 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.16□□□□□ -2.6
CX3CR1P49238 SCARNA17-201ENST00000516183 144 ntBASIC-1.16□□□□□ -2.6
CX3CR1P49238 AP002795.1-201ENST00000534879 84 ntBASIC-1.16□□□□□ -2.6
CX3CR1P49238 MIR488-201ENST00000365739 83 ntBASIC-1.17□□□□□ -2.6
CX3CR1P49238 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.17□□□□□ -2.6
CX3CR1P49238 RNU2-51P-201ENST00000410708 197 ntBASIC-1.17□□□□□ -2.6
CX3CR1P49238 RNU6-479P-201ENST00000516348 105 ntBASIC-1.17□□□□□ -2.6
CX3CR1P49238 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.18□□□□□ -2.6
CX3CR1P49238 SNORD115-37-201ENST00000363768 82 ntBASIC-1.18□□□□□ -2.6
CX3CR1P49238 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.18□□□□□ -2.6
CX3CR1P49238 RNU7-88P-201ENST00000458752 63 ntBASIC-1.18□□□□□ -2.6
CX3CR1P49238 U7.5-201ENST00000517224 61 ntBASIC-1.18□□□□□ -2.6
CX3CR1P49238 MIR548BB-201ENST00000626714 66 ntBASIC-1.18□□□□□ -2.6
CX3CR1P49238 RNU6-478P-201ENST00000363904 110 ntBASIC-1.19□□□□□ -2.6
CX3CR1P49238 SNORD116-22-201ENST00000384430 92 ntBASIC-1.19□□□□□ -2.6
CX3CR1P49238 SNORD19-201ENST00000391191 68 ntBASIC-1.19□□□□□ -2.6
CX3CR1P49238 RNU6-732P-201ENST00000516033 103 ntBASIC-1.19□□□□□ -2.6
CX3CR1P49238 RNU6-313P-201ENST00000516317 112 ntBASIC-1.19□□□□□ -2.6
CX3CR1P49238 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.19□□□□□ -2.6
CX3CR1P49238 MIR3910-1-201ENST00000580936 111 ntBASIC-1.19□□□□□ -2.6
CX3CR1P49238 MIR2052-201ENST00000636055 55 ntBASIC-1.19□□□□□ -2.6
CX3CR1P49238 RNU6-557P-201ENST00000516842 110 ntBASIC-1.2□□□□□ -2.6
CX3CR1P49238 RNY1P9-201ENST00000532431 109 ntBASIC-1.2□□□□□ -2.6
CX3CR1P49238 MIR378F-201ENST00000578143 78 ntBASIC-1.2□□□□□ -2.6
CX3CR1P49238 RNA5SP26-201ENST00000362406 119 ntBASIC-1.21□□□□□ -2.6
CX3CR1P49238 RNU6-640P-201ENST00000363693 105 ntBASIC-1.21□□□□□ -2.6
CX3CR1P49238 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.21□□□□□ -2.6
CX3CR1P49238 MIR1265-201ENST00000408444 86 ntBASIC-1.21□□□□□ -2.6
CX3CR1P49238 AC074348.1-201ENST00000426503 132 ntBASIC-1.21□□□□□ -2.6
CX3CR1P49238 RNU6-982P-201ENST00000516216 102 ntBASIC-1.21□□□□□ -2.6
CX3CR1P49238 SNORA40.13-201ENST00000516379 120 ntBASIC-1.21□□□□□ -2.6
CX3CR1P49238 RNU6-807P-201ENST00000516805 107 ntBASIC-1.21□□□□□ -2.6
CX3CR1P49238 MIR6818-201ENST00000621576 65 ntBASIC-1.21□□□□□ -2.6
CX3CR1P49238 RNU6-35P-201ENST00000384530 107 ntBASIC-1.22□□□□□ -2.6
CX3CR1P49238 RNU6-303P-201ENST00000517091 106 ntBASIC-1.22□□□□□ -2.6
CX3CR1P49238 MIR3675-201ENST00000583661 73 ntBASIC-1.22□□□□□ -2.6
CX3CR1P49238 RNU6-755P-201ENST00000364400 103 ntBASIC-1.23□□□□□ -2.61
CX3CR1P49238 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.23□□□□□ -2.61
CX3CR1P49238 SNORA8.1-201ENST00000384250 140 ntBASIC-1.23□□□□□ -2.61
CX3CR1P49238 MIR29B1-201ENST00000385015 81 ntBASIC-1.23□□□□□ -2.61
CX3CR1P49238 RNU6-604P-201ENST00000390917 100 ntBASIC-1.23□□□□□ -2.61
CX3CR1P49238 RNA5SP25-201ENST00000410815 110 ntBASIC-1.23□□□□□ -2.61
CX3CR1P49238 AL353691.2-201ENST00000443795 59 ntBASIC-1.23□□□□□ -2.61
CX3CR1P49238 RNU7-174P-201ENST00000516248 59 ntBASIC-1.23□□□□□ -2.61
CX3CR1P49238 AC132825.6-201ENST00000638861 357 ntBASIC-1.23□□□□□ -2.61
CX3CR1P49238 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.24□□□□□ -2.61
CX3CR1P49238 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.24□□□□□ -2.61
CX3CR1P49238 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.24□□□□□ -2.61
CX3CR1P49238 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.24□□□□□ -2.61
CX3CR1P49238 SNORA63.4-201ENST00000362763 126 ntBASIC-1.25□□□□□ -2.61
CX3CR1P49238 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.25□□□□□ -2.61
CX3CR1P49238 RNU6-686P-201ENST00000364839 107 ntBASIC-1.25□□□□□ -2.61
CX3CR1P49238 SNORD113-1-201ENST00000365321 69 ntBASIC-1.25□□□□□ -2.61
CX3CR1P49238 MIR548C-201ENST00000384815 97 ntBASIC-1.25□□□□□ -2.61
CX3CR1P49238 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms