Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.89□□□□□ -2.55
SCN4AP35499 MIR6888-201ENST00000621977 67 ntBASIC-0.89□□□□□ -2.55
SCN4AP35499 SNORA26.4-201ENST00000391188 123 ntBASIC-0.9□□□□□ -2.55
SCN4AP35499 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.9□□□□□ -2.55
SCN4AP35499 RNU6-431P-201ENST00000383874 107 ntBASIC-0.91□□□□□ -2.55
SCN4AP35499 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.91□□□□□ -2.55
SCN4AP35499 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.92□□□□□ -2.56
SCN4AP35499 RNU6-340P-201ENST00000364005 107 ntBASIC-0.92□□□□□ -2.56
SCN4AP35499 AL035461.1-201ENST00000421490 332 ntBASIC-0.92□□□□□ -2.56
SCN4AP35499 RNU6-81P-201ENST00000365608 104 ntBASIC-0.92□□□□□ -2.56
SCN4AP35499 SCARNA17-201ENST00000516183 144 ntBASIC-0.92□□□□□ -2.56
SCN4AP35499 MIR4490-201ENST00000582647 84 ntBASIC-0.92□□□□□ -2.56
SCN4AP35499 AP001318.4-201ENST00000616637 121 ntBASIC-0.92□□□□□ -2.56
SCN4AP35499 MIR382-201ENST00000637119 76 ntBASIC-0.92□□□□□ -2.56
SCN4AP35499 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.93□□□□□ -2.56
SCN4AP35499 RNU6-880P-201ENST00000384526 107 ntBASIC-0.93□□□□□ -2.56
SCN4AP35499 SNORA19-201ENST00000384737 128 ntBASIC-0.93□□□□□ -2.56
SCN4AP35499 RNU6-656P-201ENST00000516785 107 ntBASIC-0.93□□□□□ -2.56
SCN4AP35499 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.93□□□□□ -2.56
SCN4AP35499 AC006160.2-201ENST00000637708 154 ntBASIC-0.93□□□□□ -2.56
SCN4AP35499 MIR3133-201ENST00000583157 78 ntBASIC-0.94□□□□□ -2.56
SCN4AP35499 MIR1297-201ENST00000637311 77 ntBASIC-0.94□□□□□ -2.56
SCN4AP35499 RNU6-774P-201ENST00000363238 107 ntBASIC-0.94□□□□□ -2.56
SCN4AP35499 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.94□□□□□ -2.56
SCN4AP35499 RNU6-554P-201ENST00000410466 106 ntBASIC-0.94□□□□□ -2.56
SCN4AP35499 RNU6-589P-201ENST00000516485 107 ntBASIC-0.94□□□□□ -2.56
SCN4AP35499 SNORD115-22-201ENST00000364456 82 ntBASIC-0.95□□□□□ -2.56
SCN4AP35499 MIR1302-5-201ENST00000408164 150 ntBASIC-0.95□□□□□ -2.56
SCN4AP35499 SNORA40.13-201ENST00000516379 120 ntBASIC-0.95□□□□□ -2.56
SCN4AP35499 RNU7-153P-201ENST00000516455 62 ntBASIC-0.95□□□□□ -2.56
SCN4AP35499 SNORD77.2-201ENST00000391045 68 ntBASIC-0.96□□□□□ -2.56
SCN4AP35499 MIR4464-201ENST00000580818 92 ntBASIC-0.96□□□□□ -2.56
SCN4AP35499 MIR4306-201ENST00000583390 91 ntBASIC-0.96□□□□□ -2.56
SCN4AP35499 RNU6-633P-201ENST00000362612 103 ntBASIC-0.96□□□□□ -2.56
SCN4AP35499 SNORD114-3-201ENST00000364969 75 ntBASIC-0.96□□□□□ -2.56
SCN4AP35499 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.96□□□□□ -2.56
SCN4AP35499 AL450471.1-201ENST00000447509 127 ntBASIC-0.96□□□□□ -2.56
SCN4AP35499 AC140658.3-201ENST00000567603 271 ntBASIC-0.96□□□□□ -2.56
SCN4AP35499 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.97□□□□□ -2.56
SCN4AP35499 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.97□□□□□ -2.56
SCN4AP35499 MIR378F-201ENST00000578143 78 ntBASIC-0.97□□□□□ -2.56
SCN4AP35499 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.97□□□□□ -2.56
SCN4AP35499 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.97□□□□□ -2.56
SCN4AP35499 SNORD90-201ENST00000391145 111 ntBASIC-0.98□□□□□ -2.57
SCN4AP35499 SCARNA18B-201ENST00000458806 135 ntBASIC-0.98□□□□□ -2.57
SCN4AP35499 RNU6-162P-201ENST00000516228 103 ntBASIC-0.98□□□□□ -2.57
SCN4AP35499 RNU6-752P-201ENST00000516376 102 ntBASIC-0.98□□□□□ -2.57
SCN4AP35499 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.99□□□□□ -2.57
SCN4AP35499 RNU6-834P-201ENST00000362367 110 ntBASIC-0.99□□□□□ -2.57
SCN4AP35499 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.99□□□□□ -2.57
SCN4AP35499 MIR587-201ENST00000384845 96 ntBASIC-0.99□□□□□ -2.57
SCN4AP35499 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.99□□□□□ -2.57
SCN4AP35499 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.99□□□□□ -2.57
SCN4AP35499 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.99□□□□□ -2.57
SCN4AP35499 MIR4499-201ENST00000584834 69 ntBASIC-0.99□□□□□ -2.57
SCN4AP35499 Y_RNA.620-201ENST00000411009 88 ntBASIC-1□□□□□ -2.57
SCN4AP35499 Y_RNA.629-201ENST00000411368 105 ntBASIC-1□□□□□ -2.57
SCN4AP35499 RNU2-51P-201ENST00000410708 197 ntBASIC-1.01□□□□□ -2.57
SCN4AP35499 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.01□□□□□ -2.57
SCN4AP35499 U6.81-201ENST00000612550 106 ntBASIC-1.01□□□□□ -2.57
SCN4AP35499 SNORD115-33-201ENST00000363723 82 ntBASIC-1.02□□□□□ -2.57
SCN4AP35499 RNA5SP192-201ENST00000364404 120 ntBASIC-1.02□□□□□ -2.57
SCN4AP35499 RNU6-10P-201ENST00000384036 107 ntBASIC-1.02□□□□□ -2.57
SCN4AP35499 RNU6-24P-201ENST00000384440 107 ntBASIC-1.02□□□□□ -2.57
SCN4AP35499 snoU83B.1-201ENST00000517136 88 ntBASIC-1.02□□□□□ -2.57
SCN4AP35499 RNU6-766P-201ENST00000362478 107 ntBASIC-1.03□□□□□ -2.57
SCN4AP35499 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.03□□□□□ -2.57
SCN4AP35499 MIR1207-201ENST00000408249 87 ntBASIC-1.03□□□□□ -2.57
SCN4AP35499 AL021921.1-201ENST00000442774 93 ntBASIC-1.03□□□□□ -2.57
SCN4AP35499 RNA5SP215-201ENST00000363440 122 ntBASIC-1.03□□□□□ -2.57
SCN4AP35499 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.03□□□□□ -2.57
SCN4AP35499 RNU7-88P-201ENST00000458752 63 ntBASIC-1.03□□□□□ -2.57
SCN4AP35499 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.03□□□□□ -2.57
SCN4AP35499 MIR3668-201ENST00000582138 75 ntBASIC-1.03□□□□□ -2.57
SCN4AP35499 MIR6738-201ENST00000619620 64 ntBASIC-1.03□□□□□ -2.57
SCN4AP35499 AL500527.2-201ENST00000454105 95 ntBASIC-1.04□□□□□ -2.58
SCN4AP35499 MIR527-201ENST00000385244 85 ntBASIC-1.05□□□□□ -2.58
SCN4AP35499 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.05□□□□□ -2.58
SCN4AP35499 RNU6-109P-201ENST00000516364 107 ntBASIC-1.05□□□□□ -2.58
SCN4AP35499 RNU6-184P-201ENST00000516514 107 ntBASIC-1.05□□□□□ -2.58
SCN4AP35499 MIR3165-201ENST00000579874 75 ntBASIC-1.05□□□□□ -2.58
SCN4AP35499 MIR4320-201ENST00000636981 65 ntBASIC-1.05□□□□□ -2.58
SCN4AP35499 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.05□□□□□ -2.58
SCN4AP35499 MIR147A-201ENST00000385079 72 ntBASIC-1.05□□□□□ -2.58
SCN4AP35499 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.06□□□□□ -2.58
SCN4AP35499 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.06□□□□□ -2.58
SCN4AP35499 AL031737.1-201ENST00000450125 223 ntBASIC-1.06□□□□□ -2.58
SCN4AP35499 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.06□□□□□ -2.58
SCN4AP35499 MIR3910-1-201ENST00000580936 111 ntBASIC-1.06□□□□□ -2.58
SCN4AP35499 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.06□□□□□ -2.58
SCN4AP35499 AL365222.1-201ENST00000614661 98 ntBASIC-1.06□□□□□ -2.58
SCN4AP35499 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.06□□□□□ -2.58
SCN4AP35499 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.07□□□□□ -2.58
SCN4AP35499 RNU6-267P-201ENST00000516714 103 ntBASIC-1.07□□□□□ -2.58
SCN4AP35499 MIR8053-201ENST00000613344 75 ntBASIC-1.07□□□□□ -2.58
SCN4AP35499 SNORD63.1-201ENST00000516178 80 ntBASIC-1.08□□□□□ -2.58
SCN4AP35499 RNU6-303P-201ENST00000517091 106 ntBASIC-1.08□□□□□ -2.58
SCN4AP35499 AP002795.1-201ENST00000534879 84 ntBASIC-1.08□□□□□ -2.58
SCN4AP35499 MIR450A1-201ENST00000362262 91 ntBASIC-1.08□□□□□ -2.58
SCN4AP35499 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms