Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNA5SP147-201ENST00000516493 109 ntBASIC-0.07□□□□□ -2.42
COL5A1P20908 CYP3A54P-201ENST00000566950 75 ntBASIC-0.07□□□□□ -2.42
COL5A1P20908 MIR4263-201ENST00000584745 83 ntBASIC-0.07□□□□□ -2.42
COL5A1P20908 MIR4773-1-201ENST00000637203 78 ntBASIC-0.07□□□□□ -2.42
COL5A1P20908 RNU6-478P-201ENST00000363904 110 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 MIR521-2-201ENST00000384818 87 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
COL5A1P20908 SNORA26.2-201ENST00000390922 122 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 RNU6-752P-201ENST00000516376 102 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 MIR494-201ENST00000349529 81 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 MIR5588-201ENST00000581890 63 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 MIR1245B-201ENST00000636115 69 ntBASIC-0.08□□□□□ -2.42
COL5A1P20908 SNORD114-28-201ENST00000363610 72 ntBASIC-0.09□□□□□ -2.42
COL5A1P20908 SNORD90-201ENST00000391145 111 ntBASIC-0.09□□□□□ -2.42
COL5A1P20908 SNORD4A-201ENST00000459174 72 ntBASIC-0.09□□□□□ -2.42
COL5A1P20908 RNU6-557P-201ENST00000516842 110 ntBASIC-0.09□□□□□ -2.42
COL5A1P20908 MIR4666B-201ENST00000578142 81 ntBASIC-0.09□□□□□ -2.42
COL5A1P20908 AC062037.1-201ENST00000605302 128 ntBASIC-0.09□□□□□ -2.42
COL5A1P20908 MIR3666-201ENST00000607845 111 ntBASIC-0.09□□□□□ -2.42
COL5A1P20908 MIR6773-201ENST00000612812 74 ntBASIC-0.09□□□□□ -2.42
COL5A1P20908 SNORA2.1-201ENST00000363089 137 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 U6.81-201ENST00000612550 106 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 MIR8053-201ENST00000613344 75 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 RNU6-315P-201ENST00000362666 107 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 RNU6-787P-201ENST00000384032 107 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 RNU6-455P-201ENST00000384681 107 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 MIR154-201ENST00000385243 84 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
COL5A1P20908 RNU6-402P-201ENST00000410678 103 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 MIR4432-201ENST00000581823 84 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 MIR6507-201ENST00000613630 70 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 MIR6854-201ENST00000614935 69 ntBASIC-0.1□□□□□ -2.43
COL5A1P20908 MIR148A-201ENST00000362215 68 ntBASIC-0.11□□□□□ -2.43
COL5A1P20908 RNU6-990P-201ENST00000364385 104 ntBASIC-0.11□□□□□ -2.43
COL5A1P20908 SNORA63.6-201ENST00000364921 119 ntBASIC-0.11□□□□□ -2.43
COL5A1P20908 RNA5SP300-201ENST00000391197 107 ntBASIC-0.11□□□□□ -2.43
COL5A1P20908 AC074348.1-201ENST00000426503 132 ntBASIC-0.11□□□□□ -2.43
COL5A1P20908 AL391099.1-201ENST00000624635 187 ntBASIC-0.11□□□□□ -2.43
COL5A1P20908 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 SNORA8.1-201ENST00000384250 140 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 RNU6-901P-201ENST00000384593 106 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 SNORD56B-201ENST00000384713 71 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 MIR9-2-201ENST00000384838 87 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 RNY4P29-201ENST00000410801 97 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 SNORD57-201ENST00000448188 72 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 RNU6-70P-201ENST00000516438 60 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 RNU6-656P-201ENST00000516785 107 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 SNORA40.17-201ENST00000517256 115 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.12□□□□□ -2.43
COL5A1P20908 AC090617.8-201ENST00000623339 167 ntBASIC-0.12□□□□□ -2.43
COL5A1P20908 RNU6-228P-201ENST00000362700 106 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 SNORD73B-201ENST00000364394 72 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 SNX3P1X-201ENST00000414887 175 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 AC021146.9-201ENST00000512503 156 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 MIR4280-201ENST00000582178 76 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 snoR1.1-201ENST00000628177 80 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 MIR3202-2-201ENST00000635980 79 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 MIR4679-1-201ENST00000637619 75 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 MIR655-201ENST00000362159 97 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 SNORA33.1-201ENST00000364957 130 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 SNORD14C-201ENST00000365382 88 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 MIR582-201ENST00000365731 98 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 RNU6-900P-201ENST00000384498 102 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 MIR224-201ENST00000384889 81 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 RNU6-129P-201ENST00000391022 107 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 RNU6-279P-201ENST00000391297 101 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 MIR1255B2-201ENST00000408618 67 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 RNU6-380P-201ENST00000410207 107 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 RNA5SP451-201ENST00000410588 110 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 RNU7-154P-201ENST00000516194 62 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 AC145423.2-201ENST00000610631 239 ntBASIC-0.13□□□□□ -2.43
COL5A1P20908 SNORD114-11-201ENST00000363738 75 ntBASIC-0.14□□□□□ -2.43
COL5A1P20908 MIR519A2-201ENST00000384990 87 ntBASIC-0.14□□□□□ -2.43
COL5A1P20908 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.14□□□□□ -2.43
COL5A1P20908 SNORD113.1-201ENST00000363280 73 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 RNU6-686P-201ENST00000364839 107 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 RNU7-55P-201ENST00000459426 62 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 RNY1P9-201ENST00000532431 109 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 MIR664A-201ENST00000626086 82 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 RNA5SP215-201ENST00000363440 122 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 RNU6-320P-201ENST00000516511 106 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 RNU6-807P-201ENST00000516805 107 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 U7.4-201ENST00000614961 63 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 AC093726.3-201ENST00000637588 150 ntBASIC-0.15□□□□□ -2.43
COL5A1P20908 SNORD115-25-201ENST00000362619 82 ntBASIC-0.16□□□□□ -2.44
COL5A1P20908 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.16□□□□□ -2.44
COL5A1P20908 SNORD115-23-201ENST00000364461 82 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 308.9 ms