Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RNU6-1079P-201ENST00000362861 110 ntBASIC0.89□□□□□ -2.27
RARAP10276 RNA5SP266-201ENST00000410273 108 ntBASIC0.89□□□□□ -2.27
RARAP10276 RNA5SP67-201ENST00000516422 131 ntBASIC0.89□□□□□ -2.27
RARAP10276 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
RARAP10276 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
RARAP10276 AC243829.6-201ENST00000612652 106 ntBASIC0.89□□□□□ -2.27
RARAP10276 U4.4-201ENST00000620626 117 ntBASIC0.89□□□□□ -2.27
RARAP10276 SNORD114-29-201ENST00000364819 70 ntBASIC0.88□□□□□ -2.27
RARAP10276 MIR501-201ENST00000390204 84 ntBASIC0.88□□□□□ -2.27
RARAP10276 SNORD113-2-201ENST00000391082 72 ntBASIC0.88□□□□□ -2.27
RARAP10276 RNU7-188P-201ENST00000517063 64 ntBASIC0.88□□□□□ -2.27
RARAP10276 CYP3A54P-201ENST00000566950 75 ntBASIC0.88□□□□□ -2.27
RARAP10276 MIR6513-201ENST00000621188 64 ntBASIC0.88□□□□□ -2.27
RARAP10276 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.87□□□□□ -2.27
RARAP10276 MIR409-201ENST00000362237 79 ntBASIC0.87□□□□□ -2.27
RARAP10276 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
RARAP10276 RNU6-848P-201ENST00000515948 107 ntBASIC0.87□□□□□ -2.27
RARAP10276 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
RARAP10276 RNU6-617P-201ENST00000516147 107 ntBASIC0.87□□□□□ -2.27
RARAP10276 RNU6-473P-201ENST00000516164 107 ntBASIC0.87□□□□□ -2.27
RARAP10276 RNU6-1049P-201ENST00000516414 107 ntBASIC0.87□□□□□ -2.27
RARAP10276 MIR4677-201ENST00000584153 80 ntBASIC0.87□□□□□ -2.27
RARAP10276 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
RARAP10276 AC090617.8-201ENST00000623339 167 ntBASIC0.87□□□□□ -2.27
RARAP10276 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
RARAP10276 SNORD60.1-201ENST00000362451 73 ntBASIC0.86□□□□□ -2.27
RARAP10276 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
RARAP10276 MIR936-201ENST00000401264 98 ntBASIC0.86□□□□□ -2.27
RARAP10276 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
RARAP10276 MIR5589-201ENST00000579442 60 ntBASIC0.86□□□□□ -2.27
RARAP10276 RNU6-829P-201ENST00000363700 112 ntBASIC0.85□□□□□ -2.27
RARAP10276 Y_RNA.457-201ENST00000384237 111 ntBASIC0.85□□□□□ -2.27
RARAP10276 RNU6-987P-201ENST00000384759 104 ntBASIC0.85□□□□□ -2.27
RARAP10276 SNORD2-201ENST00000459163 69 ntBASIC0.85□□□□□ -2.27
RARAP10276 SNORA49-201ENST00000386157 136 ntBASIC0.83□□□□□ -2.28
RARAP10276 MIR760-201ENST00000390220 80 ntBASIC0.83□□□□□ -2.28
RARAP10276 RNU4-37P-201ENST00000410214 84 ntBASIC0.83□□□□□ -2.28
RARAP10276 RNU6-175P-201ENST00000516896 107 ntBASIC0.83□□□□□ -2.28
RARAP10276 MIR548AD-201ENST00000584780 82 ntBASIC0.83□□□□□ -2.28
RARAP10276 AC243829.3-201ENST00000622177 108 ntBASIC0.83□□□□□ -2.28
RARAP10276 Y_RNA.246-201ENST00000364495 108 ntBASIC0.82□□□□□ -2.28
RARAP10276 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.82□□□□□ -2.28
RARAP10276 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
RARAP10276 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
RARAP10276 MIR2909-201ENST00000617113 69 ntBASIC0.82□□□□□ -2.28
RARAP10276 RNA5SP368-201ENST00000364298 116 ntBASIC0.81□□□□□ -2.28
RARAP10276 AL021921.1-201ENST00000442774 93 ntBASIC0.81□□□□□ -2.28
RARAP10276 MIR4802-201ENST00000581881 80 ntBASIC0.81□□□□□ -2.28
RARAP10276 MIR3938-201ENST00000582157 103 ntBASIC0.81□□□□□ -2.28
RARAP10276 RNU6-518P-201ENST00000516056 96 ntBASIC0.8□□□□□ -2.28
RARAP10276 AC084368.1-201ENST00000620935 65 ntBASIC0.8□□□□□ -2.28
RARAP10276 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
RARAP10276 Y_RNA.325-201ENST00000365171 122 ntBASIC0.79□□□□□ -2.28
RARAP10276 RNA5SP128-201ENST00000365305 116 ntBASIC0.79□□□□□ -2.28
RARAP10276 RNU6-337P-201ENST00000391243 106 ntBASIC0.79□□□□□ -2.28
RARAP10276 IGLVI-20-201ENST00000519296 130 ntBASIC0.79□□□□□ -2.28
RARAP10276 MIR6759-201ENST00000638110 65 ntBASIC0.79□□□□□ -2.28
RARAP10276 RNU6-446P-201ENST00000362827 106 ntBASIC0.78□□□□□ -2.28
RARAP10276 RNU6-945P-201ENST00000383947 107 ntBASIC0.78□□□□□ -2.28
RARAP10276 RNU6-614P-201ENST00000384369 107 ntBASIC0.78□□□□□ -2.28
RARAP10276 RNU6-1246P-201ENST00000391064 107 ntBASIC0.78□□□□□ -2.28
RARAP10276 MIR1255B2-201ENST00000408618 67 ntBASIC0.78□□□□□ -2.28
RARAP10276 RNU6-863P-201ENST00000515989 104 ntBASIC0.78□□□□□ -2.28
RARAP10276 MIR6773-201ENST00000612812 74 ntBASIC0.78□□□□□ -2.28
RARAP10276 U6.59-201ENST00000615686 107 ntBASIC0.78□□□□□ -2.28
RARAP10276 Y_RNA.236-201ENST00000364427 111 ntBASIC0.77□□□□□ -2.29
RARAP10276 RNA5SP25-201ENST00000410815 110 ntBASIC0.77□□□□□ -2.29
RARAP10276 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
RARAP10276 SNORD44.1-201ENST00000363202 61 ntBASIC0.76□□□□□ -2.29
RARAP10276 RNU6-1036P-201ENST00000383959 104 ntBASIC0.76□□□□□ -2.29
RARAP10276 MIR329-2-201ENST00000385029 84 ntBASIC0.76□□□□□ -2.29
RARAP10276 RN7SL660P-201ENST00000614852 299 ntBASIC0.76□□□□□ -2.29
RARAP10276 RNA5SP98-201ENST00000363158 137 ntBASIC0.75□□□□□ -2.29
RARAP10276 SNORD114-15-201ENST00000364687 72 ntBASIC0.75□□□□□ -2.29
RARAP10276 MIR519A2-201ENST00000384990 87 ntBASIC0.75□□□□□ -2.29
RARAP10276 MIR876-201ENST00000401147 81 ntBASIC0.75□□□□□ -2.29
RARAP10276 SNORD57-201ENST00000448188 72 ntBASIC0.75□□□□□ -2.29
RARAP10276 RNU7-129P-201ENST00000516128 62 ntBASIC0.75□□□□□ -2.29
RARAP10276 SNORA62.5-201ENST00000516634 120 ntBASIC0.75□□□□□ -2.29
RARAP10276 MIR3925-201ENST00000584674 77 ntBASIC0.75□□□□□ -2.29
RARAP10276 MIR499B-201ENST00000636498 73 ntBASIC0.75□□□□□ -2.29
RARAP10276 SNORA41B-201ENST00000384785 128 ntBASIC0.74□□□□□ -2.29
RARAP10276 Z95118.1-201ENST00000421372 247 ntBASIC0.74□□□□□ -2.29
RARAP10276 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RARAP10276 RNU6-502P-201ENST00000362419 108 ntBASIC0.72□□□□□ -2.29
RARAP10276 MIRLET7B-201ENST00000385140 83 ntBASIC0.72□□□□□ -2.29
RARAP10276 Y_RNA.74-201ENST00000362911 99 ntBASIC0.71□□□□□ -2.3
RARAP10276 SNORA68.3-201ENST00000515906 83 ntBASIC0.71□□□□□ -2.3
RARAP10276 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
RARAP10276 SNORD115-25-201ENST00000362619 82 ntBASIC0.7□□□□□ -2.3
RARAP10276 Y_RNA.185-201ENST00000363894 100 ntBASIC0.7□□□□□ -2.3
RARAP10276 SNX3P1X-201ENST00000414887 175 ntBASIC0.7□□□□□ -2.3
RARAP10276 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.7□□□□□ -2.3
RARAP10276 RNU7-154P-201ENST00000516194 62 ntBASIC0.7□□□□□ -2.3
RARAP10276 RNU6-758P-201ENST00000516292 89 ntBASIC0.7□□□□□ -2.3
RARAP10276 MIR4711-201ENST00000578274 70 ntBASIC0.7□□□□□ -2.3
RARAP10276 RNA5SP63-201ENST00000391225 112 ntBASIC0.69□□□□□ -2.3
RARAP10276 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.69□□□□□ -2.3
RARAP10276 RNA5SP193-201ENST00000410353 107 ntBASIC0.69□□□□□ -2.3
RARAP10276 MIR103A1-201ENST00000362165 78 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 737.6 ms