Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 uc_338.36-201ENST00000622331 158 ntBASIC-0.1□□□□□ -2.43
HOXC4P09017 MIR6739-201ENST00000622461 75 ntBASIC-0.1□□□□□ -2.43
HOXC4P09017 SNORD45.1-201ENST00000363181 77 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 RNU6-302P-201ENST00000365249 107 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 RNU6-46P-201ENST00000383860 107 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 MIR521-2-201ENST00000384818 87 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 MIR329-2-201ENST00000385029 84 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 MIRLET7B-201ENST00000385140 83 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 RNU6-604P-201ENST00000390917 100 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 RNA5SP225-201ENST00000410874 135 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 SNORD2-201ENST00000459163 69 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 RNA5SP285-201ENST00000516619 119 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 RNU6-656P-201ENST00000516785 107 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 RNU6-807P-201ENST00000516805 107 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 MIR1297-201ENST00000637311 77 ntBASIC-0.11□□□□□ -2.43
HOXC4P09017 RNU6-900P-201ENST00000384498 102 ntBASIC-0.12□□□□□ -2.43
HOXC4P09017 SNORD78.1-201ENST00000390866 65 ntBASIC-0.12□□□□□ -2.43
HOXC4P09017 RNU6-982P-201ENST00000516216 102 ntBASIC-0.12□□□□□ -2.43
HOXC4P09017 MIR3134-201ENST00000579433 74 ntBASIC-0.12□□□□□ -2.43
HOXC4P09017 MIR3202-2-201ENST00000635980 79 ntBASIC-0.12□□□□□ -2.43
HOXC4P09017 SNORD115-22-201ENST00000364456 82 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 SNORD56B-201ENST00000384713 71 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
HOXC4P09017 RNU6-380P-201ENST00000410207 107 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 RNU7-55P-201ENST00000459426 62 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 AC104692.1-201ENST00000472406 90 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 RNU6-881P-201ENST00000516813 102 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 CYP3A54P-201ENST00000566950 75 ntBASIC-0.13□□□□□ -2.43
HOXC4P09017 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
HOXC4P09017 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
HOXC4P09017 RNU6-645P-201ENST00000364649 106 ntBASIC-0.14□□□□□ -2.43
HOXC4P09017 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.14□□□□□ -2.43
HOXC4P09017 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.14□□□□□ -2.43
HOXC4P09017 RNU6-857P-201ENST00000515893 110 ntBASIC-0.14□□□□□ -2.43
HOXC4P09017 RNA5SP395-201ENST00000516567 118 ntBASIC-0.14□□□□□ -2.43
HOXC4P09017 MIR5704-201ENST00000584029 77 ntBASIC-0.14□□□□□ -2.43
HOXC4P09017 AL590491.3-201ENST00000610731 82 ntBASIC-0.14□□□□□ -2.43
HOXC4P09017 SNORD115-23-201ENST00000364461 82 ntBASIC-0.15□□□□□ -2.43
HOXC4P09017 MIR1255B2-201ENST00000408618 67 ntBASIC-0.15□□□□□ -2.43
HOXC4P09017 AL445193.1-201ENST00000441183 141 ntBASIC-0.15□□□□□ -2.43
HOXC4P09017 SNORD4A-201ENST00000459174 72 ntBASIC-0.15□□□□□ -2.43
HOXC4P09017 RNU6-70P-201ENST00000516438 60 ntBASIC-0.15□□□□□ -2.43
HOXC4P09017 MIR8068-201ENST00000618032 68 ntBASIC-0.15□□□□□ -2.43
HOXC4P09017 AL391099.1-201ENST00000624635 187 ntBASIC-0.15□□□□□ -2.43
HOXC4P09017 MIR6759-201ENST00000638110 65 ntBASIC-0.15□□□□□ -2.43
HOXC4P09017 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.16□□□□□ -2.43
HOXC4P09017 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.16□□□□□ -2.44
HOXC4P09017 SNORD45A-201ENST00000384512 84 ntBASIC-0.16□□□□□ -2.44
HOXC4P09017 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.16□□□□□ -2.44
HOXC4P09017 RNU6-279P-201ENST00000391297 101 ntBASIC-0.16□□□□□ -2.44
HOXC4P09017 MIR4280-201ENST00000582178 76 ntBASIC-0.16□□□□□ -2.44
HOXC4P09017 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
HOXC4P09017 RNU6-973P-201ENST00000364690 107 ntBASIC-0.17□□□□□ -2.44
HOXC4P09017 MIR214-201ENST00000385214 110 ntBASIC-0.17□□□□□ -2.44
HOXC4P09017 MIR889-201ENST00000401280 79 ntBASIC-0.17□□□□□ -2.44
HOXC4P09017 SNORD113.1-201ENST00000363280 73 ntBASIC-0.18□□□□□ -2.44
HOXC4P09017 RNU6-901P-201ENST00000384593 106 ntBASIC-0.18□□□□□ -2.44
HOXC4P09017 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
HOXC4P09017 AC096531.1-201ENST00000419107 107 ntBASIC-0.18□□□□□ -2.44
HOXC4P09017 RNU6-687P-201ENST00000516443 89 ntBASIC-0.18□□□□□ -2.44
HOXC4P09017 MIR4432-201ENST00000581823 84 ntBASIC-0.18□□□□□ -2.44
HOXC4P09017 MIR3666-201ENST00000607845 111 ntBASIC-0.18□□□□□ -2.44
HOXC4P09017 U2.7-201ENST00000619197 100 ntBASIC-0.18□□□□□ -2.44
HOXC4P09017 SNORD114-31-201ENST00000363219 75 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 SNORD114-11-201ENST00000363738 75 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 SNORD115-31-201ENST00000365318 82 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 MIR519A2-201ENST00000384990 87 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 RNA5SP300-201ENST00000391197 107 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 SNORD38.3-201ENST00000516599 73 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 MIR4802-201ENST00000581881 80 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 U7.4-201ENST00000614961 63 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 snoR1.1-201ENST00000628177 80 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 MIR4788-201ENST00000639104 80 ntBASIC-0.19□□□□□ -2.44
HOXC4P09017 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.2□□□□□ -2.44
HOXC4P09017 RNU6-24P-201ENST00000384440 107 ntBASIC-0.2□□□□□ -2.44
HOXC4P09017 AC114755.3-201ENST00000481111 251 ntBASIC-0.2□□□□□ -2.44
HOXC4P09017 RNU6-523P-201ENST00000516304 54 ntBASIC-0.2□□□□□ -2.44
HOXC4P09017 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.2□□□□□ -2.44
HOXC4P09017 RNA5SP169-201ENST00000517268 117 ntBASIC-0.2□□□□□ -2.44
HOXC4P09017 IGLVI-20-201ENST00000519296 130 ntBASIC-0.2□□□□□ -2.44
HOXC4P09017 MIR548AG1-201ENST00000579932 66 ntBASIC-0.2□□□□□ -2.44
HOXC4P09017 AL353803.5-201ENST00000599815 141 ntBASIC-0.2□□□□□ -2.44
HOXC4P09017 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.2□□□□□ -2.44
HOXC4P09017 MIR548C-201ENST00000384815 97 ntBASIC-0.21□□□□□ -2.44
HOXC4P09017 MIR154-201ENST00000385243 84 ntBASIC-0.21□□□□□ -2.44
HOXC4P09017 RNU6-587P-201ENST00000391282 106 ntBASIC-0.21□□□□□ -2.44
HOXC4P09017 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.21□□□□□ -2.44
HOXC4P09017 RNU6-518P-201ENST00000516056 96 ntBASIC-0.21□□□□□ -2.44
HOXC4P09017 RNA5SP66-201ENST00000517178 101 ntBASIC-0.21□□□□□ -2.44
HOXC4P09017 MIR5589-201ENST00000579442 60 ntBASIC-0.21□□□□□ -2.44
HOXC4P09017 MIR4464-201ENST00000580818 92 ntBASIC-0.21□□□□□ -2.44
HOXC4P09017 MIR4636-201ENST00000582271 80 ntBASIC-0.21□□□□□ -2.44
HOXC4P09017 MIR8053-201ENST00000613344 75 ntBASIC-0.21□□□□□ -2.44
HOXC4P09017 SNORD116-24-201ENST00000384549 92 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms