Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.86□□□□□ -2.11
MYCNP04198 MIR501-201ENST00000390204 84 ntBASIC1.85□□□□□ -2.11
MYCNP04198 SNORA67.6-201ENST00000391093 99 ntBASIC1.84□□□□□ -2.11
MYCNP04198 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.84□□□□□ -2.11
MYCNP04198 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
MYCNP04198 MIR125B1-201ENST00000385236 88 ntBASIC1.83□□□□□ -2.12
MYCNP04198 snoR1.1-201ENST00000628177 80 ntBASIC1.83□□□□□ -2.12
MYCNP04198 RNU6-945P-201ENST00000383947 107 ntBASIC1.82□□□□□ -2.12
MYCNP04198 snoU13.18-201ENST00000459483 104 ntBASIC1.82□□□□□ -2.12
MYCNP04198 RNU6-1204P-201ENST00000363948 107 ntBASIC1.8□□□□□ -2.12
MYCNP04198 RNU6-1267P-201ENST00000410747 107 ntBASIC1.8□□□□□ -2.12
MYCNP04198 AP000676.1-201ENST00000533307 52 ntBASIC1.8□□□□□ -2.12
MYCNP04198 RN7SL660P-201ENST00000614852 299 ntBASIC1.8□□□□□ -2.12
MYCNP04198 SNORD115-23-201ENST00000364461 82 ntBASIC1.79□□□□□ -2.12
MYCNP04198 MIR1323-201ENST00000408090 73 ntBASIC1.79□□□□□ -2.12
MYCNP04198 SNORD45.2-201ENST00000363552 72 ntBASIC1.78□□□□□ -2.12
MYCNP04198 MIR760-201ENST00000390220 80 ntBASIC1.78□□□□□ -2.12
MYCNP04198 MIR4255-201ENST00000579351 72 ntBASIC1.78□□□□□ -2.12
MYCNP04198 MIR6734-201ENST00000621166 68 ntBASIC1.78□□□□□ -2.12
MYCNP04198 MIR150-201ENST00000385048 84 ntBASIC1.77□□□□□ -2.13
MYCNP04198 MIR1276-201ENST00000408707 83 ntBASIC1.77□□□□□ -2.13
MYCNP04198 Y_RNA.139-201ENST00000363464 102 ntBASIC1.76□□□□□ -2.13
MYCNP04198 MIR6504-201ENST00000613520 61 ntBASIC1.76□□□□□ -2.13
MYCNP04198 RNU6-392P-201ENST00000364926 101 ntBASIC1.75□□□□□ -2.13
MYCNP04198 RNU7-88P-201ENST00000458752 63 ntBASIC1.75□□□□□ -2.13
MYCNP04198 U7.5-201ENST00000517224 61 ntBASIC1.75□□□□□ -2.13
MYCNP04198 MIR4421-201ENST00000578133 69 ntBASIC1.75□□□□□ -2.13
MYCNP04198 MIR4661-201ENST00000582720 75 ntBASIC1.75□□□□□ -2.13
MYCNP04198 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
MYCNP04198 MIR6755-201ENST00000619993 66 ntBASIC1.74□□□□□ -2.13
MYCNP04198 RNU6-848P-201ENST00000515948 107 ntBASIC1.73□□□□□ -2.13
MYCNP04198 RNU6-617P-201ENST00000516147 107 ntBASIC1.73□□□□□ -2.13
MYCNP04198 RNU6-473P-201ENST00000516164 107 ntBASIC1.73□□□□□ -2.13
MYCNP04198 RNU6-1049P-201ENST00000516414 107 ntBASIC1.73□□□□□ -2.13
MYCNP04198 RNU4-54P-201ENST00000516428 129 ntBASIC1.73□□□□□ -2.13
MYCNP04198 SNORA31.24-201ENST00000517232 57 ntBASIC1.73□□□□□ -2.13
MYCNP04198 MIR4452-201ENST00000583004 71 ntBASIC1.73□□□□□ -2.13
MYCNP04198 RNU6-42P-201ENST00000384165 107 ntBASIC1.72□□□□□ -2.13
MYCNP04198 MIR518A1-201ENST00000385068 85 ntBASIC1.72□□□□□ -2.13
MYCNP04198 RNA5SP102-201ENST00000516865 106 ntBASIC1.72□□□□□ -2.13
MYCNP04198 SNORD57-201ENST00000448188 72 ntBASIC1.71□□□□□ -2.14
MYCNP04198 Y_RNA.698-201ENST00000516798 118 ntBASIC1.71□□□□□ -2.14
MYCNP04198 AL353770.2-201ENST00000620024 78 ntBASIC1.71□□□□□ -2.14
MYCNP04198 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
MYCNP04198 MIR1304-201ENST00000408243 91 ntBASIC1.7□□□□□ -2.14
MYCNP04198 MIR876-201ENST00000401147 81 ntBASIC1.69□□□□□ -2.14
MYCNP04198 RNU6-955P-201ENST00000410497 104 ntBASIC1.69□□□□□ -2.14
MYCNP04198 RNU7-129P-201ENST00000516128 62 ntBASIC1.69□□□□□ -2.14
MYCNP04198 SNORD63.1-201ENST00000516178 80 ntBASIC1.69□□□□□ -2.14
MYCNP04198 RNU6-822P-201ENST00000362707 106 ntBASIC1.68□□□□□ -2.14
MYCNP04198 RNU6-721P-201ENST00000410155 105 ntBASIC1.68□□□□□ -2.14
MYCNP04198 RNA5SP220-201ENST00000516298 104 ntBASIC1.68□□□□□ -2.14
MYCNP04198 MIR6078-201ENST00000611069 100 ntBASIC1.68□□□□□ -2.14
MYCNP04198 RNA5SP128-201ENST00000365305 116 ntBASIC1.67□□□□□ -2.14
MYCNP04198 SNORD114-22-201ENST00000365423 72 ntBASIC1.67□□□□□ -2.14
MYCNP04198 MIR3925-201ENST00000584674 77 ntBASIC1.66□□□□□ -2.14
MYCNP04198 RNU6-1174P-201ENST00000517278 101 ntBASIC1.65□□□□□ -2.15
MYCNP04198 MIR7974-201ENST00000615835 79 ntBASIC1.65□□□□□ -2.15
MYCNP04198 MIR608-201ENST00000384820 100 ntBASIC1.64□□□□□ -2.15
MYCNP04198 MIR499B-201ENST00000636498 73 ntBASIC1.64□□□□□ -2.15
MYCNP04198 RNU6-742P-201ENST00000365289 107 ntBASIC1.63□□□□□ -2.15
MYCNP04198 RNU6-939P-201ENST00000384634 107 ntBASIC1.63□□□□□ -2.15
MYCNP04198 MIR106A-201ENST00000384870 81 ntBASIC1.63□□□□□ -2.15
MYCNP04198 U6.103-201ENST00000637085 61 ntBASIC1.62□□□□□ -2.15
MYCNP04198 SCARNA11.2-201ENST00000517183 154 ntBASIC1.61□□□□□ -2.15
MYCNP04198 MIR6888-201ENST00000621977 67 ntBASIC1.61□□□□□ -2.15
MYCNP04198 SNORD114-27-201ENST00000363766 70 ntBASIC1.6□□□□□ -2.15
MYCNP04198 RNU6-974P-201ENST00000384099 108 ntBASIC1.6□□□□□ -2.15
MYCNP04198 RNU6-1133P-201ENST00000410963 100 ntBASIC1.6□□□□□ -2.15
MYCNP04198 SNORD63.2-201ENST00000516303 64 ntBASIC1.6□□□□□ -2.15
MYCNP04198 AL590095.2-201ENST00000604136 117 ntBASIC1.6□□□□□ -2.15
MYCNP04198 RNA5SP98-201ENST00000363158 137 ntBASIC1.59□□□□□ -2.15
MYCNP04198 SNORA62.4-201ENST00000365504 151 ntBASIC1.59□□□□□ -2.15
MYCNP04198 MIR29B1-201ENST00000385015 81 ntBASIC1.59□□□□□ -2.15
MYCNP04198 uc_338.36-201ENST00000622331 158 ntBASIC1.59□□□□□ -2.15
MYCNP04198 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
MYCNP04198 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MYCNP04198 AC098934.3-201ENST00000430450 190 ntBASIC1.58□□□□□ -2.16
MYCNP04198 MIR4464-201ENST00000580818 92 ntBASIC1.58□□□□□ -2.16
MYCNP04198 AL445584.3-201ENST00000617173 78 ntBASIC1.57□□□□□ -2.16
MYCNP04198 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MYCNP04198 MIR96-201ENST00000362288 78 ntBASIC1.56□□□□□ -2.16
MYCNP04198 AL391099.1-201ENST00000624635 187 ntBASIC1.56□□□□□ -2.16
MYCNP04198 Y_RNA.321-201ENST00000365149 102 ntBASIC1.53□□□□□ -2.16
MYCNP04198 RNU6-110P-201ENST00000384508 104 ntBASIC1.53□□□□□ -2.16
MYCNP04198 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
MYCNP04198 RPS29P1-201ENST00000465274 159 ntBASIC1.52□□□□□ -2.17
MYCNP04198 RNA5SP480-201ENST00000516840 109 ntBASIC1.52□□□□□ -2.17
MYCNP04198 MIR3170-201ENST00000582699 77 ntBASIC1.52□□□□□ -2.17
MYCNP04198 MIR6515-201ENST00000619843 57 ntBASIC1.52□□□□□ -2.17
MYCNP04198 MTRNR2L9-201ENST00000622562 75 ntBASIC1.52□□□□□ -2.17
MYCNP04198 RNU6-530P-201ENST00000391180 107 ntBASIC1.51□□□□□ -2.17
MYCNP04198 RNU6-1008P-201ENST00000384160 104 ntBASIC1.5□□□□□ -2.17
MYCNP04198 MIR520E-201ENST00000384867 87 ntBASIC1.5□□□□□ -2.17
MYCNP04198 RNU6-1111P-201ENST00000391118 107 ntBASIC1.5□□□□□ -2.17
MYCNP04198 RNU6-1223P-201ENST00000517124 104 ntBASIC1.5□□□□□ -2.17
MYCNP04198 RNU6-863P-201ENST00000515989 104 ntBASIC1.49□□□□□ -2.17
MYCNP04198 Y_RNA.613-201ENST00000410726 97 ntBASIC1.48□□□□□ -2.17
MYCNP04198 AC108740.1-201ENST00000498629 225 ntBASIC1.48□□□□□ -2.17
MYCNP04198 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms