Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MIR103A1-201ENST00000362165 78 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 SNORA25.4-201ENST00000363666 124 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 RNU6-1162P-201ENST00000384443 104 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 RNU6-30P-201ENST00000384561 107 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 MIR106A-201ENST00000384870 81 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 MIR518A1-201ENST00000385068 85 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 RNU7-188P-201ENST00000517063 64 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 CYP3A54P-201ENST00000566950 75 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 MIR5706-201ENST00000579841 80 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 U6.96-201ENST00000636425 70 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 RNA5SP192-201ENST00000364404 120 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 MIR633-201ENST00000384821 98 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 SNORA75.1-201ENST00000391130 148 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 MIR6739-201ENST00000622461 75 ntBASIC0.41□□□□□ -2.34
COL2A1P02458 RNU6-471P-201ENST00000383944 106 ntBASIC0.4□□□□□ -2.35
COL2A1P02458 MIR760-201ENST00000390220 80 ntBASIC0.4□□□□□ -2.35
COL2A1P02458 uc_338.17-201ENST00000619633 179 ntBASIC0.4□□□□□ -2.35
COL2A1P02458 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.4□□□□□ -2.35
COL2A1P02458 Y_RNA.125-201ENST00000363371 111 ntBASIC0.39□□□□□ -2.35
COL2A1P02458 MIR521-2-201ENST00000384818 87 ntBASIC0.39□□□□□ -2.35
COL2A1P02458 MIR5190-201ENST00000581537 80 ntBASIC0.39□□□□□ -2.35
COL2A1P02458 RN7SL660P-201ENST00000614852 299 ntBASIC0.39□□□□□ -2.35
COL2A1P02458 SNORD44.1-201ENST00000363202 61 ntBASIC0.38□□□□□ -2.35
COL2A1P02458 RNU4-45P-201ENST00000365469 141 ntBASIC0.38□□□□□ -2.35
COL2A1P02458 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
COL2A1P02458 RNU6-1036P-201ENST00000383959 104 ntBASIC0.38□□□□□ -2.35
COL2A1P02458 MIR501-201ENST00000390204 84 ntBASIC0.38□□□□□ -2.35
COL2A1P02458 SNORD71-201ENST00000411292 86 ntBASIC0.38□□□□□ -2.35
COL2A1P02458 Y_RNA.633-201ENST00000459107 95 ntBASIC0.38□□□□□ -2.35
COL2A1P02458 MIR4511-201ENST00000582784 87 ntBASIC0.38□□□□□ -2.35
COL2A1P02458 MIR3925-201ENST00000584674 77 ntBASIC0.38□□□□□ -2.35
COL2A1P02458 AC084368.1-201ENST00000620935 65 ntBASIC0.38□□□□□ -2.35
COL2A1P02458 SNORA9.1-201ENST00000362412 131 ntBASIC0.37□□□□□ -2.35
COL2A1P02458 MIR643-201ENST00000385267 97 ntBASIC0.37□□□□□ -2.35
COL2A1P02458 RNU6-1246P-201ENST00000391064 107 ntBASIC0.37□□□□□ -2.35
COL2A1P02458 MIR1255B2-201ENST00000408618 67 ntBASIC0.37□□□□□ -2.35
COL2A1P02458 RNU6-175P-201ENST00000516896 107 ntBASIC0.37□□□□□ -2.35
COL2A1P02458 MIR4677-201ENST00000584153 80 ntBASIC0.37□□□□□ -2.35
COL2A1P02458 U2.7-201ENST00000619197 100 ntBASIC0.37□□□□□ -2.35
COL2A1P02458 SNORD114-15-201ENST00000364687 72 ntBASIC0.36□□□□□ -2.35
COL2A1P02458 SNORA63.6-201ENST00000364921 119 ntBASIC0.36□□□□□ -2.35
COL2A1P02458 Y_RNA.325-201ENST00000365171 122 ntBASIC0.36□□□□□ -2.35
COL2A1P02458 Y_RNA.375-201ENST00000365625 101 ntBASIC0.36□□□□□ -2.35
COL2A1P02458 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
COL2A1P02458 RNU6-815P-201ENST00000384080 113 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 AC110620.1-201ENST00000416042 228 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 RNU6-542P-201ENST00000516405 103 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 MIR548AG1-201ENST00000579932 66 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 MIR466-201ENST00000580653 84 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 MIR20A-201ENST00000362279 71 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 SNORA25.5-201ENST00000363782 126 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 SNORA15B-2-201ENST00000384058 135 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 SNORA15B-1-201ENST00000384334 135 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 RNU6-110P-201ENST00000384508 104 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 MIR517B-201ENST00000385102 67 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 RNU6-337P-201ENST00000391243 106 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 RNU6-758P-201ENST00000516292 89 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 AP000676.1-201ENST00000533307 52 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 uc_338.36-201ENST00000622331 158 ntBASIC0.35□□□□□ -2.35
COL2A1P02458 RNU6-1079P-201ENST00000362861 110 ntBASIC0.34□□□□□ -2.36
COL2A1P02458 RNA5SP368-201ENST00000364298 116 ntBASIC0.34□□□□□ -2.36
COL2A1P02458 MIR519A2-201ENST00000384990 87 ntBASIC0.34□□□□□ -2.36
COL2A1P02458 SNORA49-201ENST00000386157 136 ntBASIC0.34□□□□□ -2.36
COL2A1P02458 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
COL2A1P02458 SCARNA11.2-201ENST00000517183 154 ntBASIC0.34□□□□□ -2.36
COL2A1P02458 U4.4-201ENST00000620626 117 ntBASIC0.34□□□□□ -2.36
COL2A1P02458 RNA5SP128-201ENST00000365305 116 ntBASIC0.33□□□□□ -2.36
COL2A1P02458 SNORD113-2-201ENST00000391082 72 ntBASIC0.33□□□□□ -2.36
COL2A1P02458 RNU6-518P-201ENST00000516056 96 ntBASIC0.33□□□□□ -2.36
COL2A1P02458 AC103706.3-201ENST00000636297 85 ntBASIC0.33□□□□□ -2.36
COL2A1P02458 SNORD114-29-201ENST00000364819 70 ntBASIC0.32□□□□□ -2.36
COL2A1P02458 MTND4LP19-201ENST00000403051 166 ntBASIC0.32□□□□□ -2.36
COL2A1P02458 RNU7-174P-201ENST00000516248 59 ntBASIC0.32□□□□□ -2.36
COL2A1P02458 MIR409-201ENST00000362237 79 ntBASIC0.31□□□□□ -2.36
COL2A1P02458 RNA5SP215-201ENST00000363440 122 ntBASIC0.31□□□□□ -2.36
COL2A1P02458 RNU6-499P-201ENST00000365615 107 ntBASIC0.31□□□□□ -2.36
COL2A1P02458 AC244090.1-201ENST00000441884 93 ntBASIC0.31□□□□□ -2.36
COL2A1P02458 AC104692.1-201ENST00000472406 90 ntBASIC0.31□□□□□ -2.36
COL2A1P02458 SCARNA21.1-201ENST00000515996 128 ntBASIC0.31□□□□□ -2.36
COL2A1P02458 RNU6-782P-201ENST00000516852 104 ntBASIC0.31□□□□□ -2.36
COL2A1P02458 MIR6773-201ENST00000612812 74 ntBASIC0.31□□□□□ -2.36
COL2A1P02458 RNA5SP98-201ENST00000363158 137 ntBASIC0.3□□□□□ -2.36
COL2A1P02458 Y_RNA.246-201ENST00000364495 108 ntBASIC0.3□□□□□ -2.36
COL2A1P02458 Y_RNA.250-201ENST00000364542 110 ntBASIC0.3□□□□□ -2.36
COL2A1P02458 SNORA41B-201ENST00000384785 128 ntBASIC0.3□□□□□ -2.36
COL2A1P02458 MIR548AD-201ENST00000584780 82 ntBASIC0.3□□□□□ -2.36
COL2A1P02458 SNORD60.1-201ENST00000362451 73 ntBASIC0.29□□□□□ -2.36
COL2A1P02458 Y_RNA.185-201ENST00000363894 100 ntBASIC0.29□□□□□ -2.36
COL2A1P02458 RNU6-863P-201ENST00000515989 104 ntBASIC0.29□□□□□ -2.36
COL2A1P02458 RNU6-92P-201ENST00000605893 104 ntBASIC0.29□□□□□ -2.36
COL2A1P02458 RNU6-698P-201ENST00000363523 107 ntBASIC0.29□□□□□ -2.36
COL2A1P02458 RNU6-34P-201ENST00000364874 107 ntBASIC0.29□□□□□ -2.36
COL2A1P02458 RNU6-127P-201ENST00000390897 107 ntBASIC0.29□□□□□ -2.36
COL2A1P02458 U7.6-201ENST00000610841 64 ntBASIC0.29□□□□□ -2.36
COL2A1P02458 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.37
COL2A1P02458 RNU6-829P-201ENST00000363700 112 ntBASIC0.28□□□□□ -2.37
COL2A1P02458 MIR593-201ENST00000384856 100 ntBASIC0.28□□□□□ -2.37
COL2A1P02458 RNU6-502P-201ENST00000362419 108 ntBASIC0.27□□□□□ -2.37
COL2A1P02458 RNU6-446P-201ENST00000362827 106 ntBASIC0.27□□□□□ -2.37
COL2A1P02458 MIR527-201ENST00000385244 85 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms