Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
PRKNO60260 Y_RNA.633-201ENST00000459107 95 ntBASIC0.05□□□□□ -2.4
PRKNO60260 RNU7-159P-201ENST00000459284 62 ntBASIC0.05□□□□□ -2.4
PRKNO60260 AC145423.2-201ENST00000610631 239 ntBASIC0.05□□□□□ -2.4
PRKNO60260 MIR664A-201ENST00000626086 82 ntBASIC0.05□□□□□ -2.4
PRKNO60260 RNA5SP98-201ENST00000363158 137 ntBASIC0.04□□□□□ -2.4
PRKNO60260 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
PRKNO60260 RNU6-604P-201ENST00000390917 100 ntBASIC0.04□□□□□ -2.4
PRKNO60260 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
PRKNO60260 MIR6086-201ENST00000638065 55 ntBASIC0.04□□□□□ -2.4
PRKNO60260 SNORD115-25-201ENST00000362619 82 ntBASIC0.03□□□□□ -2.4
PRKNO60260 HAR1A.1-201ENST00000459583 118 ntBASIC0.03□□□□□ -2.4
PRKNO60260 MIR3134-201ENST00000579433 74 ntBASIC0.03□□□□□ -2.4
PRKNO60260 MIR4636-201ENST00000582271 80 ntBASIC0.03□□□□□ -2.4
PRKNO60260 MIR6739-201ENST00000622461 75 ntBASIC0.03□□□□□ -2.4
PRKNO60260 SNORD45.1-201ENST00000363181 77 ntBASIC0.02□□□□□ -2.41
PRKNO60260 Y_RNA.185-201ENST00000363894 100 ntBASIC0.02□□□□□ -2.41
PRKNO60260 SNORA33.1-201ENST00000364957 130 ntBASIC0.02□□□□□ -2.41
PRKNO60260 MIR4290-201ENST00000583807 95 ntBASIC0.02□□□□□ -2.41
PRKNO60260 U7.4-201ENST00000614961 63 ntBASIC0.02□□□□□ -2.41
PRKNO60260 SNORA15B-2-201ENST00000384058 135 ntBASIC0.01□□□□□ -2.41
PRKNO60260 SNORA15B-1-201ENST00000384334 135 ntBASIC0.01□□□□□ -2.41
PRKNO60260 RNU6-929P-201ENST00000384429 107 ntBASIC0.01□□□□□ -2.41
PRKNO60260 RNU6-70P-201ENST00000516438 60 ntBASIC0.01□□□□□ -2.41
PRKNO60260 AP000676.1-201ENST00000533307 52 ntBASIC0.01□□□□□ -2.41
PRKNO60260 MIR4802-201ENST00000581881 80 ntBASIC0.01□□□□□ -2.41
PRKNO60260 SNORD115-22-201ENST00000364456 82 ntBASIC0□□□□□ -2.41
PRKNO60260 RNU6-1241P-201ENST00000384536 107 ntBASIC0□□□□□ -2.41
PRKNO60260 MIR521-2-201ENST00000384818 87 ntBASIC0□□□□□ -2.41
PRKNO60260 MIR5589-201ENST00000579442 60 ntBASIC0□□□□□ -2.41
PRKNO60260 MIR6773-201ENST00000612812 74 ntBASIC0□□□□□ -2.41
PRKNO60260 MIR6507-201ENST00000613630 70 ntBASIC0□□□□□ -2.41
PRKNO60260 RNU6-502P-201ENST00000362419 108 ntBASIC-0.01□□□□□ -2.41
PRKNO60260 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.01□□□□□ -2.41
PRKNO60260 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.01□□□□□ -2.41
PRKNO60260 RNU6-587P-201ENST00000391282 106 ntBASIC-0.01□□□□□ -2.41
PRKNO60260 MIR8053-201ENST00000613344 75 ntBASIC-0.01□□□□□ -2.41
PRKNO60260 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.01□□□□□ -2.41
PRKNO60260 U6.96-201ENST00000636425 70 ntBASIC-0.01□□□□□ -2.41
PRKNO60260 RNU6-645P-201ENST00000364649 106 ntBASIC-0.02□□□□□ -2.41
PRKNO60260 RNU6-411P-201ENST00000384451 107 ntBASIC-0.02□□□□□ -2.41
PRKNO60260 SNORD45A-201ENST00000384512 84 ntBASIC-0.02□□□□□ -2.41
PRKNO60260 RNU6-337P-201ENST00000391243 106 ntBASIC-0.02□□□□□ -2.41
PRKNO60260 AC244250.2-201ENST00000418731 148 ntBASIC-0.02□□□□□ -2.41
PRKNO60260 RNU6-982P-201ENST00000516216 102 ntBASIC-0.02□□□□□ -2.41
PRKNO60260 RNU6-656P-201ENST00000516785 107 ntBASIC-0.02□□□□□ -2.41
PRKNO60260 AC090617.8-201ENST00000623339 167 ntBASIC-0.02□□□□□ -2.41
PRKNO60260 RNU6-46P-201ENST00000383860 107 ntBASIC-0.03□□□□□ -2.41
PRKNO60260 MIRLET7B-201ENST00000385140 83 ntBASIC-0.03□□□□□ -2.41
PRKNO60260 MIR889-201ENST00000401280 79 ntBASIC-0.03□□□□□ -2.41
PRKNO60260 RNU6-687P-201ENST00000516443 89 ntBASIC-0.03□□□□□ -2.41
PRKNO60260 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
PRKNO60260 SNORD114-31-201ENST00000363219 75 ntBASIC-0.04□□□□□ -2.42
PRKNO60260 SNORA32.1-201ENST00000364514 115 ntBASIC-0.04□□□□□ -2.42
PRKNO60260 MIR9-2-201ENST00000384838 87 ntBASIC-0.04□□□□□ -2.42
PRKNO60260 MIR154-201ENST00000385243 84 ntBASIC-0.04□□□□□ -2.42
PRKNO60260 MIR1265-201ENST00000408444 86 ntBASIC-0.04□□□□□ -2.42
PRKNO60260 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.04□□□□□ -2.42
PRKNO60260 SNORD113.1-201ENST00000363280 73 ntBASIC-0.05□□□□□ -2.42
PRKNO60260 RNU6-30P-201ENST00000384561 107 ntBASIC-0.05□□□□□ -2.42
PRKNO60260 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.05□□□□□ -2.42
PRKNO60260 RNU6-455P-201ENST00000384681 107 ntBASIC-0.05□□□□□ -2.42
PRKNO60260 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
PRKNO60260 AC104692.1-201ENST00000472406 90 ntBASIC-0.05□□□□□ -2.42
PRKNO60260 RNU6-523P-201ENST00000516304 54 ntBASIC-0.05□□□□□ -2.42
PRKNO60260 RNU6-638P-201ENST00000516582 104 ntBASIC-0.05□□□□□ -2.42
PRKNO60260 RNU6-881P-201ENST00000516813 102 ntBASIC-0.05□□□□□ -2.42
PRKNO60260 MIR655-201ENST00000362159 97 ntBASIC-0.06□□□□□ -2.42
PRKNO60260 SNORD115-31-201ENST00000365318 82 ntBASIC-0.06□□□□□ -2.42
PRKNO60260 RNU6-900P-201ENST00000384498 102 ntBASIC-0.06□□□□□ -2.42
PRKNO60260 RNU7-55P-201ENST00000459426 62 ntBASIC-0.06□□□□□ -2.42
PRKNO60260 RNU6-776P-201ENST00000364403 104 ntBASIC-0.07□□□□□ -2.42
PRKNO60260 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.07□□□□□ -2.42
PRKNO60260 SNORD49B-201ENST00000365172 72 ntBASIC-0.07□□□□□ -2.42
PRKNO60260 RNU6-634P-201ENST00000459134 106 ntBASIC-0.07□□□□□ -2.42
PRKNO60260 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.07□□□□□ -2.42
PRKNO60260 CYP3A54P-201ENST00000566950 75 ntBASIC-0.07□□□□□ -2.42
PRKNO60260 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
PRKNO60260 MIR4662A-201ENST00000637499 67 ntBASIC-0.07□□□□□ -2.42
PRKNO60260 RNA5SP368-201ENST00000364298 116 ntBASIC-0.08□□□□□ -2.42
PRKNO60260 SNORD115-23-201ENST00000364461 82 ntBASIC-0.08□□□□□ -2.42
PRKNO60260 MTND4LP1-201ENST00000446263 157 ntBASIC-0.08□□□□□ -2.42
PRKNO60260 RNU6-895P-201ENST00000384125 103 ntBASIC-0.09□□□□□ -2.42
PRKNO60260 MIR1255B2-201ENST00000408618 67 ntBASIC-0.09□□□□□ -2.42
PRKNO60260 U2.7-201ENST00000619197 100 ntBASIC-0.09□□□□□ -2.42
PRKNO60260 RNU6-973P-201ENST00000364690 107 ntBASIC-0.1□□□□□ -2.43
PRKNO60260 MIR214-201ENST00000385214 110 ntBASIC-0.1□□□□□ -2.43
PRKNO60260 uc_338.36-201ENST00000622331 158 ntBASIC-0.1□□□□□ -2.43
PRKNO60260 AL391099.1-201ENST00000624635 187 ntBASIC-0.1□□□□□ -2.43
PRKNO60260 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.1□□□□□ -2.43
PRKNO60260 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.11□□□□□ -2.43
PRKNO60260 SNORA18.1-201ENST00000363418 128 ntBASIC-0.11□□□□□ -2.43
PRKNO60260 RNU6-668P-201ENST00000364180 107 ntBASIC-0.11□□□□□ -2.43
PRKNO60260 SNORD116-24-201ENST00000384549 92 ntBASIC-0.11□□□□□ -2.43
PRKNO60260 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.11□□□□□ -2.43
PRKNO60260 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.11□□□□□ -2.43
PRKNO60260 SNORD114-12-201ENST00000365400 75 ntBASIC-0.12□□□□□ -2.43
PRKNO60260 SNORD56B-201ENST00000384713 71 ntBASIC-0.12□□□□□ -2.43
PRKNO60260 MIR548C-201ENST00000384815 97 ntBASIC-0.12□□□□□ -2.43
PRKNO60260 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 277.5 ms