Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.56□□□□□ -2.98
HMGN4O00479 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-3.56□□□□□ -2.98
HMGN4O00479 SNORD19B-201ENST00000459623 84 ntBASIC-3.56□□□□□ -2.98
HMGN4O00479 SNORD63.2-201ENST00000516303 64 ntBASIC-3.56□□□□□ -2.98
HMGN4O00479 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.56□□□□□ -2.98
HMGN4O00479 AC090971.5-201ENST00000621102 293 ntBASIC-3.56□□□□□ -2.98
HMGN4O00479 Y_RNA.51-201ENST00000362725 102 ntBASIC-3.57□□□□□ -2.98
HMGN4O00479 Y_RNA.160-201ENST00000363677 92 ntBASIC-3.57□□□□□ -2.98
HMGN4O00479 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.57□□□□□ -2.98
HMGN4O00479 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.57□□□□□ -2.98
HMGN4O00479 AC025166.1-201ENST00000612411 163 ntBASIC-3.57□□□□□ -2.98
HMGN4O00479 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.57□□□□□ -2.98
HMGN4O00479 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.58□□□□□ -2.98
HMGN4O00479 RNU6-669P-201ENST00000365575 107 ntBASIC-3.58□□□□□ -2.98
HMGN4O00479 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.58□□□□□ -2.98
HMGN4O00479 SNORD116-16-201ENST00000384533 92 ntBASIC-3.58□□□□□ -2.98
HMGN4O00479 MIR1302-6-201ENST00000408466 90 ntBASIC-3.58□□□□□ -2.98
HMGN4O00479 Y_RNA.632-201ENST00000459189 102 ntBASIC-3.58□□□□□ -2.98
HMGN4O00479 MIR548V-201ENST00000584165 80 ntBASIC-3.58□□□□□ -2.98
HMGN4O00479 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.58□□□□□ -2.98
HMGN4O00479 MIR1236-201ENST00000408340 102 ntBASIC-3.59□□□□□ -2.98
HMGN4O00479 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-3.59□□□□□ -2.98
HMGN4O00479 MIR5693-201ENST00000577722 73 ntBASIC-3.59□□□□□ -2.98
HMGN4O00479 MIR4777-201ENST00000583710 86 ntBASIC-3.59□□□□□ -2.98
HMGN4O00479 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.6□□□□□ -2.99
HMGN4O00479 RNU6-239P-201ENST00000390990 99 ntBASIC-3.6□□□□□ -2.99
HMGN4O00479 RNU7-121P-201ENST00000516604 62 ntBASIC-3.6□□□□□ -2.99
HMGN4O00479 Y_RNA.717-201ENST00000517106 92 ntBASIC-3.6□□□□□ -2.99
HMGN4O00479 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.61□□□□□ -2.99
HMGN4O00479 Y_RNA.455-201ENST00000384230 98 ntBASIC-3.61□□□□□ -2.99
HMGN4O00479 MIR1302-1-201ENST00000637932 143 ntBASIC-3.61□□□□□ -2.99
HMGN4O00479 RNU6-915P-201ENST00000364943 103 ntBASIC-3.62□□□□□ -2.99
HMGN4O00479 Y_RNA.435-201ENST00000384095 112 ntBASIC-3.62□□□□□ -2.99
HMGN4O00479 RNU6-718P-201ENST00000516166 105 ntBASIC-3.62□□□□□ -2.99
HMGN4O00479 RNU6-781P-201ENST00000516377 101 ntBASIC-3.62□□□□□ -2.99
HMGN4O00479 RNU6-523P-201ENST00000516304 54 ntBASIC-3.63□□□□□ -2.99
HMGN4O00479 RNU7-151P-201ENST00000516930 53 ntBASIC-3.63□□□□□ -2.99
HMGN4O00479 SNORD1B-201ENST00000363091 84 ntBASIC-3.64□□□□□ -2.99
HMGN4O00479 SNORD58A-201ENST00000383875 65 ntBASIC-3.64□□□□□ -2.99
HMGN4O00479 RNU6-639P-201ENST00000384074 107 ntBASIC-3.64□□□□□ -2.99
HMGN4O00479 MIR581-201ENST00000384895 96 ntBASIC-3.64□□□□□ -2.99
HMGN4O00479 SNORD77.2-201ENST00000391045 68 ntBASIC-3.64□□□□□ -2.99
HMGN4O00479 Y_RNA.277-201ENST00000364754 102 ntBASIC-3.65□□□□□ -2.99
HMGN4O00479 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.65□□□□□ -2.99
HMGN4O00479 SNORD60-201ENST00000383903 83 ntBASIC-3.65□□□□□ -2.99
HMGN4O00479 SNORD113-2-201ENST00000391082 72 ntBASIC-3.65□□□□□ -2.99
HMGN4O00479 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.66□□□□□ -3
HMGN4O00479 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.66□□□□□ -3
HMGN4O00479 MIR4679-2-201ENST00000578358 77 ntBASIC-3.67□□□□□ -3
HMGN4O00479 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.68□□□□□ -3
HMGN4O00479 RNU6-972P-201ENST00000391208 107 ntBASIC-3.68□□□□□ -3
HMGN4O00479 MIR548F1-201ENST00000408667 84 ntBASIC-3.68□□□□□ -3
HMGN4O00479 Y_RNA.626-201ENST00000411288 95 ntBASIC-3.68□□□□□ -3
HMGN4O00479 AC113195.1-201ENST00000579952 141 ntBASIC-3.68□□□□□ -3
HMGN4O00479 Y_RNA.70-201ENST00000362886 110 ntBASIC-3.69□□□□□ -3
HMGN4O00479 SNORD113-3-201ENST00000364830 72 ntBASIC-3.69□□□□□ -3
HMGN4O00479 Y_RNA.395-201ENST00000383945 109 ntBASIC-3.69□□□□□ -3
HMGN4O00479 Y_RNA.516-201ENST00000384541 124 ntBASIC-3.69□□□□□ -3
HMGN4O00479 SNORD116-4-201ENST00000384733 96 ntBASIC-3.69□□□□□ -3
HMGN4O00479 RNU6-460P-201ENST00000391158 108 ntBASIC-3.69□□□□□ -3
HMGN4O00479 AL158147.1-201ENST00000443970 75 ntBASIC-3.69□□□□□ -3
HMGN4O00479 RNU7-197P-201ENST00000458836 62 ntBASIC-3.69□□□□□ -3
HMGN4O00479 RNU6-795P-201ENST00000516323 103 ntBASIC-3.69□□□□□ -3
HMGN4O00479 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.69□□□□□ -3
HMGN4O00479 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.7□□□□□ -3
HMGN4O00479 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.7□□□□□ -3
HMGN4O00479 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.7□□□□□ -3
HMGN4O00479 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.7□□□□□ -3
HMGN4O00479 MIR630-201ENST00000384957 97 ntBASIC-3.7□□□□□ -3
HMGN4O00479 RNU6-918P-201ENST00000391219 106 ntBASIC-3.7□□□□□ -3
HMGN4O00479 MIR548N-201ENST00000408742 75 ntBASIC-3.7□□□□□ -3
HMGN4O00479 RNU7-153P-201ENST00000516455 62 ntBASIC-3.7□□□□□ -3
HMGN4O00479 AL035470.1-201ENST00000622571 220 ntBASIC-3.7□□□□□ -3
HMGN4O00479 MIR7978-201ENST00000636158 59 ntBASIC-3.7□□□□□ -3
HMGN4O00479 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.71□□□□□ -3
HMGN4O00479 MIR579-201ENST00000385221 98 ntBASIC-3.72□□□□□ -3
HMGN4O00479 MIR125B1-201ENST00000385236 88 ntBASIC-3.72□□□□□ -3
HMGN4O00479 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.72□□□□□ -3
HMGN4O00479 RNU6-982P-201ENST00000516216 102 ntBASIC-3.72□□□□□ -3
HMGN4O00479 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.73□□□□□ -3.01
HMGN4O00479 RNU6-887P-201ENST00000410660 100 ntBASIC-3.73□□□□□ -3.01
HMGN4O00479 RNY4P25-201ENST00000459254 96 ntBASIC-3.73□□□□□ -3.01
HMGN4O00479 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-3.73□□□□□ -3.01
HMGN4O00479 Y_RNA.194-201ENST00000363985 102 ntBASIC-3.74□□□□□ -3.01
HMGN4O00479 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.74□□□□□ -3.01
HMGN4O00479 RNU6-520P-201ENST00000384717 104 ntBASIC-3.74□□□□□ -3.01
HMGN4O00479 SNORA41B-201ENST00000384785 128 ntBASIC-3.74□□□□□ -3.01
HMGN4O00479 MT-TL1-201ENST00000386347 75 ntBASIC-3.74□□□□□ -3.01
HMGN4O00479 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.74□□□□□ -3.01
HMGN4O00479 MIR3675-201ENST00000583661 73 ntBASIC-3.74□□□□□ -3.01
HMGN4O00479 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.74□□□□□ -3.01
HMGN4O00479 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.75□□□□□ -3.01
HMGN4O00479 RNY4P18-201ENST00000391107 89 ntBASIC-3.75□□□□□ -3.01
HMGN4O00479 RNU6-537P-201ENST00000517277 103 ntBASIC-3.75□□□□□ -3.01
HMGN4O00479 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.75□□□□□ -3.01
HMGN4O00479 RNU6-834P-201ENST00000362367 110 ntBASIC-3.76□□□□□ -3.01
HMGN4O00479 RNA5SP215-201ENST00000363440 122 ntBASIC-3.76□□□□□ -3.01
HMGN4O00479 SNORD116-10-201ENST00000363791 102 ntBASIC-3.76□□□□□ -3.01
HMGN4O00479 RNU6-604P-201ENST00000390917 100 ntBASIC-3.76□□□□□ -3.01
HMGN4O00479 MIR513C-201ENST00000401352 84 ntBASIC-3.76□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms