Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.06□□□□□ -2.9
TRAV12-3A0A0B4J271 RNU6-918P-201ENST00000391219 106 ntBASIC-3.06□□□□□ -2.9
TRAV12-3A0A0B4J271 Y_RNA.630-201ENST00000411370 108 ntBASIC-3.06□□□□□ -2.9
TRAV12-3A0A0B4J271 RNU6-781P-201ENST00000516377 101 ntBASIC-3.06□□□□□ -2.9
TRAV12-3A0A0B4J271 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.06□□□□□ -2.9
TRAV12-3A0A0B4J271 RNY4-201ENST00000516507 96 ntBASIC-3.06□□□□□ -2.9
TRAV12-3A0A0B4J271 RNU6-694P-201ENST00000364071 147 ntBASIC-3.07□□□□□ -2.9
TRAV12-3A0A0B4J271 AC005520.4-201ENST00000604337 90 ntBASIC-3.07□□□□□ -2.9
TRAV12-3A0A0B4J271 AC139792.2-201ENST00000624218 587 ntBASIC-3.07□□□□□ -2.9
TRAV12-3A0A0B4J271 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.08□□□□□ -2.9
TRAV12-3A0A0B4J271 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.08□□□□□ -2.9
TRAV12-3A0A0B4J271 MIR548AA1-201ENST00000384971 97 ntBASIC-3.08□□□□□ -2.9
TRAV12-3A0A0B4J271 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.08□□□□□ -2.9
TRAV12-3A0A0B4J271 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-3.08□□□□□ -2.9
TRAV12-3A0A0B4J271 RNU6-247P-201ENST00000362636 107 ntBASIC-3.09□□□□□ -2.9
TRAV12-3A0A0B4J271 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.09□□□□□ -2.9
TRAV12-3A0A0B4J271 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.1□□□□□ -2.91
TRAV12-3A0A0B4J271 RNU7-197P-201ENST00000458836 62 ntBASIC-3.1□□□□□ -2.91
TRAV12-3A0A0B4J271 MIR4777-201ENST00000583710 86 ntBASIC-3.1□□□□□ -2.91
TRAV12-3A0A0B4J271 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.11□□□□□ -2.91
TRAV12-3A0A0B4J271 Y_RNA.58-201ENST00000362807 102 ntBASIC-3.11□□□□□ -2.91
TRAV12-3A0A0B4J271 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.11□□□□□ -2.91
TRAV12-3A0A0B4J271 RNU6-460P-201ENST00000391158 108 ntBASIC-3.11□□□□□ -2.91
TRAV12-3A0A0B4J271 MIR369-201ENST00000362155 70 ntBASIC-3.12□□□□□ -2.91
TRAV12-3A0A0B4J271 Y_RNA.158-201ENST00000363651 101 ntBASIC-3.12□□□□□ -2.91
TRAV12-3A0A0B4J271 SNORD42.2-201ENST00000365570 69 ntBASIC-3.12□□□□□ -2.91
TRAV12-3A0A0B4J271 AL158147.1-201ENST00000443970 75 ntBASIC-3.12□□□□□ -2.91
TRAV12-3A0A0B4J271 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.13□□□□□ -2.91
TRAV12-3A0A0B4J271 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.13□□□□□ -2.91
TRAV12-3A0A0B4J271 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.13□□□□□ -2.91
TRAV12-3A0A0B4J271 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.13□□□□□ -2.91
TRAV12-3A0A0B4J271 RNU6-988P-201ENST00000519081 107 ntBASIC-3.13□□□□□ -2.91
TRAV12-3A0A0B4J271 SNORD18C-201ENST00000362704 69 ntBASIC-3.14□□□□□ -2.91
TRAV12-3A0A0B4J271 RNU6-698P-201ENST00000363523 107 ntBASIC-3.14□□□□□ -2.91
TRAV12-3A0A0B4J271 RNU6-34P-201ENST00000364874 107 ntBASIC-3.14□□□□□ -2.91
TRAV12-3A0A0B4J271 RNY3P1-201ENST00000365085 102 ntBASIC-3.14□□□□□ -2.91
TRAV12-3A0A0B4J271 RNY3P14-201ENST00000384309 102 ntBASIC-3.14□□□□□ -2.91
TRAV12-3A0A0B4J271 RNU6-713P-201ENST00000384761 107 ntBASIC-3.14□□□□□ -2.91
TRAV12-3A0A0B4J271 MIR4679-2-201ENST00000578358 77 ntBASIC-3.14□□□□□ -2.91
TRAV12-3A0A0B4J271 AC025166.1-201ENST00000612411 163 ntBASIC-3.14□□□□□ -2.91
TRAV12-3A0A0B4J271 AC012531.4-201ENST00000616509 177 ntBASIC-3.14□□□□□ -2.91
TRAV12-3A0A0B4J271 U6.104-201ENST00000637979 90 ntBASIC-3.14□□□□□ -2.91
TRAV12-3A0A0B4J271 SNORA27.2-201ENST00000363365 126 ntBASIC-3.15□□□□□ -2.91
TRAV12-3A0A0B4J271 SNORD58A-201ENST00000383875 65 ntBASIC-3.15□□□□□ -2.91
TRAV12-3A0A0B4J271 RNU6-639P-201ENST00000384074 107 ntBASIC-3.15□□□□□ -2.91
TRAV12-3A0A0B4J271 MIR1236-201ENST00000408340 102 ntBASIC-3.15□□□□□ -2.91
TRAV12-3A0A0B4J271 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.15□□□□□ -2.91
TRAV12-3A0A0B4J271 U4.4-201ENST00000620626 117 ntBASIC-3.15□□□□□ -2.91
TRAV12-3A0A0B4J271 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.16□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.16□□□□□ -2.92
TRAV12-3A0A0B4J271 AL035470.1-201ENST00000622571 220 ntBASIC-3.16□□□□□ -2.92
TRAV12-3A0A0B4J271 SNORD113-3-201ENST00000364830 72 ntBASIC-3.17□□□□□ -2.92
TRAV12-3A0A0B4J271 RNU6-995P-201ENST00000391244 107 ntBASIC-3.17□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.18□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.18□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.18□□□□□ -2.92
TRAV12-3A0A0B4J271 MTND2P23-201ENST00000422990 651 ntBASIC-3.18□□□□□ -2.92
TRAV12-3A0A0B4J271 RNU4-11P-201ENST00000365287 132 ntBASIC-3.19□□□□□ -2.92
TRAV12-3A0A0B4J271 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.19□□□□□ -2.92
TRAV12-3A0A0B4J271 RNU6-795P-201ENST00000516323 103 ntBASIC-3.19□□□□□ -2.92
TRAV12-3A0A0B4J271 MIR5693-201ENST00000577722 73 ntBASIC-3.19□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.19□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.19□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.19□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.19□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.19□□□□□ -2.92
TRAV12-3A0A0B4J271 RNU6-972P-201ENST00000391208 107 ntBASIC-3.2□□□□□ -2.92
TRAV12-3A0A0B4J271 RNU6-803P-201ENST00000516034 102 ntBASIC-3.2□□□□□ -2.92
TRAV12-3A0A0B4J271 MIR4680-201ENST00000580906 66 ntBASIC-3.2□□□□□ -2.92
TRAV12-3A0A0B4J271 AP001340.1-201ENST00000624405 217 ntBASIC-3.2□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.21□□□□□ -2.92
TRAV12-3A0A0B4J271 SNORD77.2-201ENST00000391045 68 ntBASIC-3.21□□□□□ -2.92
TRAV12-3A0A0B4J271 SNORD58.1-201ENST00000391313 66 ntBASIC-3.21□□□□□ -2.92
TRAV12-3A0A0B4J271 RNY3P8-201ENST00000411366 126 ntBASIC-3.21□□□□□ -2.92
TRAV12-3A0A0B4J271 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.21□□□□□ -2.92
TRAV12-3A0A0B4J271 MIR548V-201ENST00000584165 80 ntBASIC-3.21□□□□□ -2.92
TRAV12-3A0A0B4J271 SNORD58C-201ENST00000365223 64 ntBASIC-3.22□□□□□ -2.92
TRAV12-3A0A0B4J271 SNORD116-16-201ENST00000384533 92 ntBASIC-3.22□□□□□ -2.92
TRAV12-3A0A0B4J271 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.22□□□□□ -2.92
TRAV12-3A0A0B4J271 MIR581-201ENST00000384895 96 ntBASIC-3.23□□□□□ -2.93
TRAV12-3A0A0B4J271 MIR5009-201ENST00000578736 100 ntBASIC-3.23□□□□□ -2.93
TRAV12-3A0A0B4J271 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.23□□□□□ -2.93
TRAV12-3A0A0B4J271 MIR8062-201ENST00000621515 85 ntBASIC-3.23□□□□□ -2.93
TRAV12-3A0A0B4J271 RNU6-887P-201ENST00000410660 100 ntBASIC-3.24□□□□□ -2.93
TRAV12-3A0A0B4J271 RNU7-153P-201ENST00000516455 62 ntBASIC-3.24□□□□□ -2.93
TRAV12-3A0A0B4J271 RNU6-623P-201ENST00000363143 105 ntBASIC-3.25□□□□□ -2.93
TRAV12-3A0A0B4J271 RNY1P1-201ENST00000364372 112 ntBASIC-3.25□□□□□ -2.93
TRAV12-3A0A0B4J271 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.25□□□□□ -2.93
TRAV12-3A0A0B4J271 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.25□□□□□ -2.93
TRAV12-3A0A0B4J271 SNORD63.2-201ENST00000516303 64 ntBASIC-3.25□□□□□ -2.93
TRAV12-3A0A0B4J271 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.26□□□□□ -2.93
TRAV12-3A0A0B4J271 RNU6-669P-201ENST00000365575 107 ntBASIC-3.26□□□□□ -2.93
TRAV12-3A0A0B4J271 AP000770.2-201ENST00000623694 100 ntBASIC-3.26□□□□□ -2.93
TRAV12-3A0A0B4J271 RNU6-474P-201ENST00000384243 107 ntBASIC-3.27□□□□□ -2.93
TRAV12-3A0A0B4J271 RNU6-537P-201ENST00000517277 103 ntBASIC-3.27□□□□□ -2.93
TRAV12-3A0A0B4J271 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.27□□□□□ -2.93
TRAV12-3A0A0B4J271 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.28□□□□□ -2.93
TRAV12-3A0A0B4J271 SNORD116-10-201ENST00000363791 102 ntBASIC-3.28□□□□□ -2.93
TRAV12-3A0A0B4J271 SNORD113-2-201ENST00000391082 72 ntBASIC-3.28□□□□□ -2.93
TRAV12-3A0A0B4J271 RNY4P25-201ENST00000459254 96 ntBASIC-3.28□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 324.9 ms