Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RNU6-900P-201ENST00000384498 102 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 RNU6-476P-201ENST00000384726 107 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 MIR548A1-201ENST00000385041 97 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 RNA5SP292-201ENST00000390974 118 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 MIR3910-1-201ENST00000580936 111 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 MIR548O2-201ENST00000616090 70 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 MIR6739-201ENST00000622461 75 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 RNA5SP192-201ENST00000364404 120 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 RNU6-901P-201ENST00000384593 106 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 MIR9-2-201ENST00000384838 87 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 RNU6-644P-201ENST00000391155 98 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 RNU6-589P-201ENST00000516485 107 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 MIR4306-201ENST00000583390 91 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 AC103810.7-201ENST00000607821 91 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 uc_338.36-201ENST00000622331 158 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.34□□□□□ -2.46
SHANK1Q9Y566 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.34□□□□□ -2.46
SHANK1Q9Y566 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.34□□□□□ -2.46
SHANK1Q9Y566 SNORA40.13-201ENST00000516379 120 ntBASIC-0.34□□□□□ -2.46
SHANK1Q9Y566 RNA5SP461-201ENST00000516451 104 ntBASIC-0.34□□□□□ -2.46
SHANK1Q9Y566 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.34□□□□□ -2.46
SHANK1Q9Y566 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.35□□□□□ -2.46
SHANK1Q9Y566 SNORA19-201ENST00000384737 128 ntBASIC-0.35□□□□□ -2.46
SHANK1Q9Y566 MT-TR-201ENST00000387439 65 ntBASIC-0.35□□□□□ -2.46
SHANK1Q9Y566 AC097510.1-201ENST00000510945 133 ntBASIC-0.35□□□□□ -2.46
SHANK1Q9Y566 AC021146.9-201ENST00000512503 156 ntBASIC-0.35□□□□□ -2.46
SHANK1Q9Y566 MIR3179-1-201ENST00000578940 84 ntBASIC-0.35□□□□□ -2.46
SHANK1Q9Y566 MIR3179-2-201ENST00000579107 84 ntBASIC-0.35□□□□□ -2.46
SHANK1Q9Y566 MIR3179-3-201ENST00000579566 84 ntBASIC-0.35□□□□□ -2.46
SHANK1Q9Y566 MIR3179-4-201ENST00000617599 84 ntBASIC-0.35□□□□□ -2.46
SHANK1Q9Y566 AC093726.3-201ENST00000637588 150 ntBASIC-0.35□□□□□ -2.46
SHANK1Q9Y566 RNU6-774P-201ENST00000363238 107 ntBASIC-0.35□□□□□ -2.47
SHANK1Q9Y566 RNU6-431P-201ENST00000383874 107 ntBASIC-0.35□□□□□ -2.47
SHANK1Q9Y566 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.35□□□□□ -2.47
SHANK1Q9Y566 HLA-S-202ENST00000425174 53 ntBASIC-0.35□□□□□ -2.47
SHANK1Q9Y566 RNA5SP66-201ENST00000517178 101 ntBASIC-0.35□□□□□ -2.47
SHANK1Q9Y566 AC132825.6-201ENST00000638861 357 ntBASIC-0.35□□□□□ -2.47
SHANK1Q9Y566 RNU6-766P-201ENST00000362478 107 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 RNU6-905P-201ENST00000384434 107 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 MIR196A1-201ENST00000388006 70 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 snoU13.17-201ENST00000458802 104 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 RNU6-158P-201ENST00000517104 100 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 MIR655-201ENST00000362159 97 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 RNU6-260P-201ENST00000384092 107 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 MIR519C-201ENST00000385053 87 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 RNU6-881P-201ENST00000516813 102 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 MIR5704-201ENST00000584029 77 ntBASIC-0.36□□□□□ -2.47
SHANK1Q9Y566 RNU6-624P-201ENST00000363411 107 ntBASIC-0.37□□□□□ -2.47
SHANK1Q9Y566 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.37□□□□□ -2.47
SHANK1Q9Y566 MTATP8P2-201ENST00000435212 202 ntBASIC-0.37□□□□□ -2.47
SHANK1Q9Y566 MIR3133-201ENST00000583157 78 ntBASIC-0.37□□□□□ -2.47
SHANK1Q9Y566 MIR4324-201ENST00000584846 72 ntBASIC-0.37□□□□□ -2.47
SHANK1Q9Y566 MIR6773-201ENST00000612812 74 ntBASIC-0.37□□□□□ -2.47
SHANK1Q9Y566 MIR6507-201ENST00000613630 70 ntBASIC-0.37□□□□□ -2.47
SHANK1Q9Y566 MIR6854-201ENST00000614935 69 ntBASIC-0.37□□□□□ -2.47
SHANK1Q9Y566 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 RNU6-106P-201ENST00000384405 107 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 RNA5SP180-201ENST00000516181 101 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 AC140658.3-201ENST00000567603 271 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 MIR4499-201ENST00000584834 69 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 RNU6-681P-201ENST00000364012 104 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 SNORD115-23-201ENST00000364461 82 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 RNU6-887P-201ENST00000410660 100 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 AL031737.1-201ENST00000450125 223 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 AC022137.1-201ENST00000483735 151 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 AC026421.1-201ENST00000519101 163 ntBASIC-0.38□□□□□ -2.47
SHANK1Q9Y566 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 SNORD115-25-201ENST00000362619 82 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 AL606753.1-201ENST00000427435 87 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 RNU6-795P-201ENST00000516323 103 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 RNU6-752P-201ENST00000516376 102 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 MIR3165-201ENST00000579874 75 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 MIR548Z-201ENST00000584743 97 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 SNORA63.6-201ENST00000364921 119 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 RNU6-54P-201ENST00000365563 107 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 AC021146.6-201ENST00000514659 117 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 RNU6-479P-201ENST00000516348 105 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 MIR4796-201ENST00000580742 81 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 MIR4280-201ENST00000582178 76 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 MIR3140-201ENST00000583685 90 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.39□□□□□ -2.47
SHANK1Q9Y566 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
SHANK1Q9Y566 MIR3657-201ENST00000584818 117 ntBASIC-0.4□□□□□ -2.47
SHANK1Q9Y566 AC138207.3-201ENST00000585289 166 ntBASIC-0.4□□□□□ -2.47
SHANK1Q9Y566 MIR382-201ENST00000637119 76 ntBASIC-0.4□□□□□ -2.47
SHANK1Q9Y566 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.4□□□□□ -2.47
SHANK1Q9Y566 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.4□□□□□ -2.47
SHANK1Q9Y566 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.4□□□□□ -2.47
SHANK1Q9Y566 RNU6-721P-201ENST00000410155 105 ntBASIC-0.4□□□□□ -2.47
SHANK1Q9Y566 SNORA18.5-201ENST00000516616 101 ntBASIC-0.4□□□□□ -2.47
SHANK1Q9Y566 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.4□□□□□ -2.47
SHANK1Q9Y566 MIR590-201ENST00000385008 97 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms