Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SNORD71-201ENST00000411292 86 ntBASIC0.93□□□□□ -2.26
FNDC3AQ9Y2H6 SNORA25.4-201ENST00000363666 124 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 MIR518A1-201ENST00000385068 85 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 AC021146.9-201ENST00000512503 156 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 RNU6-1232P-201ENST00000516299 86 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 RNU6-229P-201ENST00000516614 102 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 RNU6-656P-201ENST00000516785 107 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 AL590095.2-201ENST00000604136 117 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 MIR6739-201ENST00000622461 75 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 MIR5706-201ENST00000579841 80 ntBASIC0.91□□□□□ -2.26
FNDC3AQ9Y2H6 SNORA2A-201ENST00000383885 135 ntBASIC0.9□□□□□ -2.27
FNDC3AQ9Y2H6 RN7SL793P-201ENST00000583259 296 ntBASIC0.9□□□□□ -2.27
FNDC3AQ9Y2H6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
FNDC3AQ9Y2H6 MIR216A-201ENST00000385063 110 ntBASIC0.89□□□□□ -2.27
FNDC3AQ9Y2H6 MIR548E-201ENST00000408287 88 ntBASIC0.89□□□□□ -2.27
FNDC3AQ9Y2H6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.89□□□□□ -2.27
FNDC3AQ9Y2H6 Y_RNA.125-201ENST00000363371 111 ntBASIC0.88□□□□□ -2.27
FNDC3AQ9Y2H6 RNU6-471P-201ENST00000383944 106 ntBASIC0.88□□□□□ -2.27
FNDC3AQ9Y2H6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 Y_RNA.250-201ENST00000364542 110 ntBASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 RNU6-1162P-201ENST00000384443 104 ntBASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 MIR4714-201ENST00000580728 77 ntBASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 MIR6755-201ENST00000619993 66 ntBASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 SNORA63.6-201ENST00000364921 119 ntBASIC0.86□□□□□ -2.27
FNDC3AQ9Y2H6 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.86□□□□□ -2.27
FNDC3AQ9Y2H6 MIR521-2-201ENST00000384818 87 ntBASIC0.85□□□□□ -2.27
FNDC3AQ9Y2H6 AC098934.3-201ENST00000430450 190 ntBASIC0.85□□□□□ -2.27
FNDC3AQ9Y2H6 MIR516B1-201ENST00000385211 90 ntBASIC0.84□□□□□ -2.27
FNDC3AQ9Y2H6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
FNDC3AQ9Y2H6 AL157398.1-201ENST00000452981 186 ntBASIC0.84□□□□□ -2.27
FNDC3AQ9Y2H6 Y_RNA.633-201ENST00000459107 95 ntBASIC0.84□□□□□ -2.27
FNDC3AQ9Y2H6 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
FNDC3AQ9Y2H6 SNORA33.1-201ENST00000364957 130 ntBASIC0.83□□□□□ -2.28
FNDC3AQ9Y2H6 MIR548C-201ENST00000384815 97 ntBASIC0.83□□□□□ -2.28
FNDC3AQ9Y2H6 RNU6-945P-201ENST00000383947 107 ntBASIC0.82□□□□□ -2.28
FNDC3AQ9Y2H6 MIR9-2-201ENST00000384838 87 ntBASIC0.82□□□□□ -2.28
FNDC3AQ9Y2H6 MIR760-201ENST00000390220 80 ntBASIC0.82□□□□□ -2.28
FNDC3AQ9Y2H6 RNU6-1089P-201ENST00000516473 104 ntBASIC0.82□□□□□ -2.28
FNDC3AQ9Y2H6 MIR4511-201ENST00000582784 87 ntBASIC0.82□□□□□ -2.28
FNDC3AQ9Y2H6 U7.6-201ENST00000610841 64 ntBASIC0.81□□□□□ -2.28
FNDC3AQ9Y2H6 MIR20A-201ENST00000362279 71 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 SNORA15B-2-201ENST00000384058 135 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 SNORA15B-1-201ENST00000384334 135 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 MIR501-201ENST00000390204 84 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 AC103706.3-201ENST00000636297 85 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 Y_RNA.375-201ENST00000365625 101 ntBASIC0.79□□□□□ -2.28
FNDC3AQ9Y2H6 RNU7-188P-201ENST00000517063 64 ntBASIC0.79□□□□□ -2.28
FNDC3AQ9Y2H6 MIR4677-201ENST00000584153 80 ntBASIC0.79□□□□□ -2.28
FNDC3AQ9Y2H6 AC244090.1-201ENST00000441884 93 ntBASIC0.78□□□□□ -2.28
FNDC3AQ9Y2H6 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
FNDC3AQ9Y2H6 MIR548V-201ENST00000584165 80 ntBASIC0.78□□□□□ -2.28
FNDC3AQ9Y2H6 MIR6513-201ENST00000621188 64 ntBASIC0.78□□□□□ -2.28
FNDC3AQ9Y2H6 MIR499B-201ENST00000636498 73 ntBASIC0.78□□□□□ -2.28
FNDC3AQ9Y2H6 SNORD44.1-201ENST00000363202 61 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 RNA5SP299-201ENST00000391203 116 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 RNU7-129P-201ENST00000516128 62 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-542P-201ENST00000516405 103 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 MIR6835-201ENST00000621552 64 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 SNORD114-29-201ENST00000364819 70 ntBASIC0.76□□□□□ -2.29
FNDC3AQ9Y2H6 MIR193B-201ENST00000384907 83 ntBASIC0.76□□□□□ -2.29
FNDC3AQ9Y2H6 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
FNDC3AQ9Y2H6 U6.96-201ENST00000636425 70 ntBASIC0.76□□□□□ -2.29
FNDC3AQ9Y2H6 Y_RNA.374-201ENST00000365606 101 ntBASIC0.75□□□□□ -2.29
FNDC3AQ9Y2H6 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
FNDC3AQ9Y2H6 AC084368.1-201ENST00000620935 65 ntBASIC0.75□□□□□ -2.29
FNDC3AQ9Y2H6 RNA5SP215-201ENST00000363440 122 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 RNA5SP128-201ENST00000365305 116 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 SNORA68.3-201ENST00000515906 83 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-848P-201ENST00000515948 107 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-617P-201ENST00000516147 107 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-473P-201ENST00000516164 107 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-1049P-201ENST00000516414 107 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 MIR103A1-201ENST00000362165 78 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 MIR936-201ENST00000401264 98 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 MIR1273G-201ENST00000577677 100 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 MIR548AD-201ENST00000584780 82 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 AC243829.6-201ENST00000612652 106 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 U2.7-201ENST00000619197 100 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 Y_RNA.30-201ENST00000362572 97 ntBASIC0.72□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-175P-201ENST00000516896 107 ntBASIC0.72□□□□□ -2.29
FNDC3AQ9Y2H6 AC090617.8-201ENST00000623339 167 ntBASIC0.72□□□□□ -2.29
FNDC3AQ9Y2H6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.72□□□□□ -2.29
FNDC3AQ9Y2H6 AC110620.1-201ENST00000416042 228 ntBASIC0.71□□□□□ -2.3
FNDC3AQ9Y2H6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.71□□□□□ -2.3
FNDC3AQ9Y2H6 CYP3A54P-201ENST00000566950 75 ntBASIC0.71□□□□□ -2.3
FNDC3AQ9Y2H6 MIR3925-201ENST00000584674 77 ntBASIC0.71□□□□□ -2.3
FNDC3AQ9Y2H6 MIR630-201ENST00000384957 97 ntBASIC0.7□□□□□ -2.3
FNDC3AQ9Y2H6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
FNDC3AQ9Y2H6 SNORD114-23-201ENST00000363536 72 ntBASIC0.69□□□□□ -2.3
FNDC3AQ9Y2H6 RNU6-669P-201ENST00000365575 107 ntBASIC0.69□□□□□ -2.3
FNDC3AQ9Y2H6 RN7SL660P-201ENST00000614852 299 ntBASIC0.69□□□□□ -2.3
FNDC3AQ9Y2H6 RNU6-1036P-201ENST00000383959 104 ntBASIC0.68□□□□□ -2.3
FNDC3AQ9Y2H6 SNORA49-201ENST00000386157 136 ntBASIC0.68□□□□□ -2.3
FNDC3AQ9Y2H6 RNA5SP193-201ENST00000410353 107 ntBASIC0.68□□□□□ -2.3
FNDC3AQ9Y2H6 RNU6-863P-201ENST00000515989 104 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 256.5 ms