Protein–RNA interactions for Protein: Q9NVU0

POLR3E, DNA-directed RNA polymerase III subunit RPC5, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3EQ9NVU0 RNU6-656P-201ENST00000516785 107 ntBASIC1.11□□□□□ -2.23
POLR3EQ9NVU0 AC103706.3-201ENST00000636297 85 ntBASIC1.11□□□□□ -2.23
POLR3EQ9NVU0 SNORA2A-201ENST00000383885 135 ntBASIC1.1□□□□□ -2.23
POLR3EQ9NVU0 MIR598-201ENST00000384868 97 ntBASIC1.1□□□□□ -2.23
POLR3EQ9NVU0 HMGN2P22-201ENST00000427588 175 ntBASIC1.1□□□□□ -2.23
POLR3EQ9NVU0 Y_RNA.633-201ENST00000459107 95 ntBASIC1.1□□□□□ -2.23
POLR3EQ9NVU0 PVT1_3.1-201ENST00000620853 95 ntBASIC1.1□□□□□ -2.23
POLR3EQ9NVU0 Y_RNA.125-201ENST00000363371 111 ntBASIC1.09□□□□□ -2.23
POLR3EQ9NVU0 PSMC1P5-201ENST00000512850 177 ntBASIC1.09□□□□□ -2.23
POLR3EQ9NVU0 MIR4511-201ENST00000582784 87 ntBASIC1.09□□□□□ -2.23
POLR3EQ9NVU0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.08□□□□□ -2.24
POLR3EQ9NVU0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
POLR3EQ9NVU0 SNORA63.6-201ENST00000364921 119 ntBASIC1.07□□□□□ -2.24
POLR3EQ9NVU0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.07□□□□□ -2.24
POLR3EQ9NVU0 Y_RNA.374-201ENST00000365606 101 ntBASIC1.06□□□□□ -2.24
POLR3EQ9NVU0 AC098934.3-201ENST00000430450 190 ntBASIC1.06□□□□□ -2.24
POLR3EQ9NVU0 AC021146.9-201ENST00000512503 156 ntBASIC1.06□□□□□ -2.24
POLR3EQ9NVU0 CYP3A137P-201ENST00000562436 69 ntBASIC1.06□□□□□ -2.24
POLR3EQ9NVU0 MIR5000-201ENST00000577717 103 ntBASIC1.06□□□□□ -2.24
POLR3EQ9NVU0 MIR3973-201ENST00000579824 107 ntBASIC1.06□□□□□ -2.24
POLR3EQ9NVU0 RNA5SP215-201ENST00000363440 122 ntBASIC1.05□□□□□ -2.24
POLR3EQ9NVU0 Y_RNA.375-201ENST00000365625 101 ntBASIC1.05□□□□□ -2.24
POLR3EQ9NVU0 RNU6-863P-201ENST00000515989 104 ntBASIC1.05□□□□□ -2.24
POLR3EQ9NVU0 RNU6-229P-201ENST00000516614 102 ntBASIC1.05□□□□□ -2.24
POLR3EQ9NVU0 AC244090.1-201ENST00000441884 93 ntBASIC1.04□□□□□ -2.24
POLR3EQ9NVU0 RNU6-542P-201ENST00000516405 103 ntBASIC1.04□□□□□ -2.24
POLR3EQ9NVU0 MIR4653-201ENST00000585107 83 ntBASIC1.04□□□□□ -2.24
POLR3EQ9NVU0 MIR20A-201ENST00000362279 71 ntBASIC1.03□□□□□ -2.24
POLR3EQ9NVU0 MIR548E-201ENST00000408287 88 ntBASIC1.03□□□□□ -2.24
POLR3EQ9NVU0 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
POLR3EQ9NVU0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
POLR3EQ9NVU0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.02□□□□□ -2.25
POLR3EQ9NVU0 MIR582-201ENST00000365731 98 ntBASIC1.01□□□□□ -2.25
POLR3EQ9NVU0 snoU13.13-201ENST00000458842 104 ntBASIC1.01□□□□□ -2.25
POLR3EQ9NVU0 RNU6-1089P-201ENST00000516473 104 ntBASIC1.01□□□□□ -2.25
POLR3EQ9NVU0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.01□□□□□ -2.25
POLR3EQ9NVU0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1□□□□□ -2.25
POLR3EQ9NVU0 Y_RNA.423-201ENST00000384057 113 ntBASIC1□□□□□ -2.25
POLR3EQ9NVU0 SNORD2-201ENST00000459163 69 ntBASIC1□□□□□ -2.25
POLR3EQ9NVU0 RNU4-54P-201ENST00000516428 129 ntBASIC1□□□□□ -2.25
POLR3EQ9NVU0 Y_RNA.30-201ENST00000362572 97 ntBASIC0.99□□□□□ -2.25
POLR3EQ9NVU0 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
POLR3EQ9NVU0 SNORD114-29-201ENST00000364819 70 ntBASIC0.98□□□□□ -2.25
POLR3EQ9NVU0 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
POLR3EQ9NVU0 RNA5SP436-201ENST00000516020 115 ntBASIC0.98□□□□□ -2.25
POLR3EQ9NVU0 AL109933.3-201ENST00000619095 188 ntBASIC0.98□□□□□ -2.25
POLR3EQ9NVU0 MIR216A-201ENST00000385063 110 ntBASIC0.97□□□□□ -2.25
POLR3EQ9NVU0 MIR6755-201ENST00000619993 66 ntBASIC0.97□□□□□ -2.25
POLR3EQ9NVU0 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
POLR3EQ9NVU0 AL157398.1-201ENST00000452981 186 ntBASIC0.96□□□□□ -2.26
POLR3EQ9NVU0 RNU6-351P-201ENST00000516097 100 ntBASIC0.96□□□□□ -2.26
POLR3EQ9NVU0 MIR516B1-201ENST00000385211 90 ntBASIC0.94□□□□□ -2.26
POLR3EQ9NVU0 MIR4677-201ENST00000584153 80 ntBASIC0.94□□□□□ -2.26
POLR3EQ9NVU0 MIR548AD-201ENST00000584780 82 ntBASIC0.94□□□□□ -2.26
POLR3EQ9NVU0 SNORA33.1-201ENST00000364957 130 ntBASIC0.93□□□□□ -2.26
POLR3EQ9NVU0 RNU6-669P-201ENST00000365575 107 ntBASIC0.93□□□□□ -2.26
POLR3EQ9NVU0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.93□□□□□ -2.26
POLR3EQ9NVU0 RN7SL793P-201ENST00000583259 296 ntBASIC0.93□□□□□ -2.26
POLR3EQ9NVU0 RNU6-302P-201ENST00000365249 107 ntBASIC0.92□□□□□ -2.26
POLR3EQ9NVU0 AC110620.1-201ENST00000416042 228 ntBASIC0.92□□□□□ -2.26
POLR3EQ9NVU0 SNORD44.1-201ENST00000363202 61 ntBASIC0.91□□□□□ -2.26
POLR3EQ9NVU0 RNU6-945P-201ENST00000383947 107 ntBASIC0.91□□□□□ -2.26
POLR3EQ9NVU0 MIR501-201ENST00000390204 84 ntBASIC0.91□□□□□ -2.26
POLR3EQ9NVU0 MIR760-201ENST00000390220 80 ntBASIC0.91□□□□□ -2.26
POLR3EQ9NVU0 MIR4714-201ENST00000580728 77 ntBASIC0.91□□□□□ -2.26
POLR3EQ9NVU0 RNA5SP128-201ENST00000365305 116 ntBASIC0.9□□□□□ -2.27
POLR3EQ9NVU0 RNA5SP299-201ENST00000391203 116 ntBASIC0.9□□□□□ -2.27
POLR3EQ9NVU0 Y_RNA.178-201ENST00000363832 102 ntBASIC0.89□□□□□ -2.27
POLR3EQ9NVU0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
POLR3EQ9NVU0 AC243829.6-201ENST00000612652 106 ntBASIC0.89□□□□□ -2.27
POLR3EQ9NVU0 RNU7-188P-201ENST00000517063 64 ntBASIC0.88□□□□□ -2.27
POLR3EQ9NVU0 U2.7-201ENST00000619197 100 ntBASIC0.88□□□□□ -2.27
POLR3EQ9NVU0 AC084368.1-201ENST00000620935 65 ntBASIC0.88□□□□□ -2.27
POLR3EQ9NVU0 U6.96-201ENST00000636425 70 ntBASIC0.88□□□□□ -2.27
POLR3EQ9NVU0 SCARNA21.1-201ENST00000515996 128 ntBASIC0.87□□□□□ -2.27
POLR3EQ9NVU0 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
POLR3EQ9NVU0 MIR6866-201ENST00000638146 69 ntBASIC0.87□□□□□ -2.27
POLR3EQ9NVU0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
POLR3EQ9NVU0 MIR548C-201ENST00000384815 97 ntBASIC0.86□□□□□ -2.27
POLR3EQ9NVU0 MIR9-2-201ENST00000384838 87 ntBASIC0.86□□□□□ -2.27
POLR3EQ9NVU0 MIR193B-201ENST00000384907 83 ntBASIC0.86□□□□□ -2.27
POLR3EQ9NVU0 MIR517B-201ENST00000385102 67 ntBASIC0.85□□□□□ -2.27
POLR3EQ9NVU0 MIR6513-201ENST00000621188 64 ntBASIC0.85□□□□□ -2.27
POLR3EQ9NVU0 RNA5SP121-201ENST00000516537 101 ntBASIC0.84□□□□□ -2.27
POLR3EQ9NVU0 RNU6-175P-201ENST00000516896 107 ntBASIC0.84□□□□□ -2.27
POLR3EQ9NVU0 CYP3A54P-201ENST00000566950 75 ntBASIC0.84□□□□□ -2.27
POLR3EQ9NVU0 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
POLR3EQ9NVU0 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
POLR3EQ9NVU0 RNU7-174P-201ENST00000516248 59 ntBASIC0.83□□□□□ -2.28
POLR3EQ9NVU0 RNU6-698P-201ENST00000363523 107 ntBASIC0.82□□□□□ -2.28
POLR3EQ9NVU0 SNORA25.5-201ENST00000363782 126 ntBASIC0.82□□□□□ -2.28
POLR3EQ9NVU0 RNU6-34P-201ENST00000364874 107 ntBASIC0.82□□□□□ -2.28
POLR3EQ9NVU0 MIR876-201ENST00000401147 81 ntBASIC0.82□□□□□ -2.28
POLR3EQ9NVU0 MIR1273G-201ENST00000577677 100 ntBASIC0.81□□□□□ -2.28
POLR3EQ9NVU0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
POLR3EQ9NVU0 MIR548V-201ENST00000584165 80 ntBASIC0.8□□□□□ -2.28
POLR3EQ9NVU0 MIR3925-201ENST00000584674 77 ntBASIC0.8□□□□□ -2.28
POLR3EQ9NVU0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
POLR3EQ9NVU0 MIR499B-201ENST00000636498 73 ntBASIC0.79□□□□□ -2.28
POLR3EQ9NVU0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms