Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MIR7110-201ENST00000612638 86 ntBASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 Y_RNA.282-201ENST00000364793 102 ntBASIC1.37□□□□□ -2.19
PRDM9Q9NQV7 SNORA40.16-201ENST00000517238 121 ntBASIC1.37□□□□□ -2.19
PRDM9Q9NQV7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 MIR527-201ENST00000385244 85 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 MIR1287-201ENST00000408492 90 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 RNU1-29P-201ENST00000606574 126 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 AC090617.8-201ENST00000623339 167 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 SNORD114-29-201ENST00000364819 70 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 SNORD116.2-201ENST00000391251 93 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 MIR1255B2-201ENST00000408618 67 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 U7.6-201ENST00000610841 64 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 MIR429-201ENST00000362106 83 ntBASIC1.34□□□□□ -2.19
PRDM9Q9NQV7 RNU6-246P-201ENST00000384702 107 ntBASIC1.34□□□□□ -2.19
PRDM9Q9NQV7 MIR519A2-201ENST00000384990 87 ntBASIC1.34□□□□□ -2.19
PRDM9Q9NQV7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
PRDM9Q9NQV7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
PRDM9Q9NQV7 RNU4-33P-201ENST00000364316 85 ntBASIC1.33□□□□□ -2.2
PRDM9Q9NQV7 SNORA40B-201ENST00000385573 128 ntBASIC1.33□□□□□ -2.2
PRDM9Q9NQV7 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
PRDM9Q9NQV7 TRMT112P2-201ENST00000512910 132 ntBASIC1.33□□□□□ -2.2
PRDM9Q9NQV7 RNA5SP470-201ENST00000516463 106 ntBASIC1.32□□□□□ -2.2
PRDM9Q9NQV7 MIR4752-201ENST00000579672 72 ntBASIC1.32□□□□□ -2.2
PRDM9Q9NQV7 AL353765.1-201ENST00000605514 183 ntBASIC1.32□□□□□ -2.2
PRDM9Q9NQV7 MIR8070-201ENST00000616510 88 ntBASIC1.32□□□□□ -2.2
PRDM9Q9NQV7 MIR499A-201ENST00000384903 122 ntBASIC1.31□□□□□ -2.2
PRDM9Q9NQV7 RNA5SP222-201ENST00000411039 105 ntBASIC1.31□□□□□ -2.2
PRDM9Q9NQV7 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
PRDM9Q9NQV7 MIR548X-201ENST00000580069 75 ntBASIC1.3□□□□□ -2.2
PRDM9Q9NQV7 MIR6773-201ENST00000612812 74 ntBASIC1.3□□□□□ -2.2
PRDM9Q9NQV7 RNU6-35P-201ENST00000384530 107 ntBASIC1.29□□□□□ -2.2
PRDM9Q9NQV7 SNORD115-25-201ENST00000362619 82 ntBASIC1.28□□□□□ -2.2
PRDM9Q9NQV7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
PRDM9Q9NQV7 RNU6-337P-201ENST00000391243 106 ntBASIC1.28□□□□□ -2.2
PRDM9Q9NQV7 MIR26B-201ENST00000362251 77 ntBASIC1.27□□□□□ -2.21
PRDM9Q9NQV7 SNORD1B-201ENST00000363091 84 ntBASIC1.27□□□□□ -2.21
PRDM9Q9NQV7 RNA5SP517-201ENST00000364724 117 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 RNU6-392P-201ENST00000364926 101 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 MIR140-201ENST00000385282 100 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 SNORA49-201ENST00000386157 136 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 RNU6-930P-201ENST00000390938 100 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 SNORA2A-201ENST00000383885 135 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 RNU6-172P-201ENST00000411000 93 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 RNU6-848P-201ENST00000515948 107 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 RNU6-617P-201ENST00000516147 107 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 RNU6-473P-201ENST00000516164 107 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 RNU6-1049P-201ENST00000516414 107 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.24□□□□□ -2.21
PRDM9Q9NQV7 MIRLET7B-201ENST00000385140 83 ntBASIC1.24□□□□□ -2.21
PRDM9Q9NQV7 AC069271.1-201ENST00000445577 156 ntBASIC1.24□□□□□ -2.21
PRDM9Q9NQV7 RNU7-188P-201ENST00000517063 64 ntBASIC1.24□□□□□ -2.21
PRDM9Q9NQV7 MIR7111-201ENST00000619751 72 ntBASIC1.24□□□□□ -2.21
PRDM9Q9NQV7 SNORD118-201ENST00000363593 134 ntBASIC1.23□□□□□ -2.21
PRDM9Q9NQV7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
PRDM9Q9NQV7 MIR4661-201ENST00000582720 75 ntBASIC1.23□□□□□ -2.21
PRDM9Q9NQV7 AL353770.2-201ENST00000620024 78 ntBASIC1.23□□□□□ -2.21
PRDM9Q9NQV7 RNU6-810P-201ENST00000364001 107 ntBASIC1.22□□□□□ -2.21
PRDM9Q9NQV7 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
PRDM9Q9NQV7 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
PRDM9Q9NQV7 RNY1P8-201ENST00000383970 114 ntBASIC1.21□□□□□ -2.22
PRDM9Q9NQV7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.21□□□□□ -2.22
PRDM9Q9NQV7 SNORA36.2-201ENST00000384004 127 ntBASIC1.2□□□□□ -2.22
PRDM9Q9NQV7 SNORA40.8-201ENST00000411034 126 ntBASIC1.2□□□□□ -2.22
PRDM9Q9NQV7 RNU6-175P-201ENST00000516896 107 ntBASIC1.2□□□□□ -2.22
PRDM9Q9NQV7 SNORA25.18-201ENST00000607153 114 ntBASIC1.2□□□□□ -2.22
PRDM9Q9NQV7 Y_RNA.109-201ENST00000363215 102 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 RNU6-458P-201ENST00000384179 107 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 MIR548F3-201ENST00000408509 87 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 MIR1276-201ENST00000408707 83 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 SNORD71-201ENST00000411292 86 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 RNU6-229P-201ENST00000516614 102 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 MIR548AG1-201ENST00000579932 66 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 U6.58-201ENST00000613107 107 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 RNU6-502P-201ENST00000362419 108 ntBASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 ACA64.5-201ENST00000516207 127 ntBASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 MIR4677-201ENST00000584153 80 ntBASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 MIR6504-201ENST00000613520 61 ntBASIC1.17□□□□□ -2.22
PRDM9Q9NQV7 RNU7-160P-201ENST00000516660 62 ntBASIC1.16□□□□□ -2.22
PRDM9Q9NQV7 RNU6-419P-201ENST00000517030 63 ntBASIC1.16□□□□□ -2.22
PRDM9Q9NQV7 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
PRDM9Q9NQV7 RNU6-838P-201ENST00000363399 108 ntBASIC1.15□□□□□ -2.23
PRDM9Q9NQV7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.15□□□□□ -2.23
PRDM9Q9NQV7 MIR501-201ENST00000390204 84 ntBASIC1.15□□□□□ -2.23
PRDM9Q9NQV7 AL590095.2-201ENST00000604136 117 ntBASIC1.15□□□□□ -2.23
PRDM9Q9NQV7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
PRDM9Q9NQV7 snoU13.18-201ENST00000459483 104 ntBASIC1.14□□□□□ -2.23
PRDM9Q9NQV7 RNU6-782P-201ENST00000516852 104 ntBASIC1.14□□□□□ -2.23
PRDM9Q9NQV7 RNU6-1036P-201ENST00000383959 104 ntBASIC1.13□□□□□ -2.23
PRDM9Q9NQV7 MIR4490-201ENST00000582647 84 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms